BLASTX nr result

ID: Cnidium21_contig00039030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039030
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ10001.1| putative nitrate-induced NOI protein [Petunia int...    62   4e-08
ref|NP_566905.1| RPM1-interacting protein 4 (RIN4) [Arabidopsis ...    60   2e-07
ref|XP_002322218.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002318696.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_002877610.1| hypothetical protein ARALYDRAFT_485205 [Arab...    57   2e-06

>gb|AAQ10001.1| putative nitrate-induced NOI protein [Petunia integrifolia subsp.
           inflata] gi|33329204|gb|AAQ10002.1| putative
           nitrate-induced NOI protein [Petunia integrifolia subsp.
           inflata]
          Length = 85

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/54 (61%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
 Frame = +2

Query: 206 LPKFGEWDLKNPGQA-EFSVIFEKARNAKKEGNRHKFNPDSPVFKKEPEATPFT 364
           LP+FGEWD+ NP  A EFSVIF++ARNAKK+      N DSP   KE E TPFT
Sbjct: 10  LPRFGEWDVNNPAAAREFSVIFDRARNAKKD-----VNNDSPWKNKERETTPFT 58


>ref|NP_566905.1| RPM1-interacting protein 4 (RIN4) [Arabidopsis thaliana]
           gi|21554778|gb|AAM63688.1| unknown [Arabidopsis
           thaliana] gi|89111830|gb|ABD60687.1| At3g48450
           [Arabidopsis thaliana] gi|332644897|gb|AEE78418.1|
           RPM1-interacting protein 4 (RIN4) [Arabidopsis thaliana]
          Length = 89

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/68 (47%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = +2

Query: 191 NRGVALPKFGEWDLKNPGQAE-FSVIFEKARNAKKEGNRHKFNPDSPVFKKEPEATPFTN 367
           NR   LPKFGEWD  NPG AE F+VIF KAR+ KK        P+S V     E  P  N
Sbjct: 5   NRARPLPKFGEWDATNPGSAEGFTVIFNKARDDKKTMKTAVAGPESIVSPPRNEEPPKNN 64

Query: 368 QKHNQRHN 391
             H+  H+
Sbjct: 65  NNHHHNHH 72


>ref|XP_002322218.1| predicted protein [Populus trichocarpa] gi|222869214|gb|EEF06345.1|
           predicted protein [Populus trichocarpa]
          Length = 76

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
 Frame = +2

Query: 185 MANRGVALPKFGEWDLKNPGQAE-FSVIFEKARNAKKEGNRHKFNPDSPVFKKEPEATPF 361
           MA++G  LPKFGEWD+ NP  AE F+VIF KAR+ KK  N    +P+  V  +  E    
Sbjct: 1   MASQGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTKN----SPEKVVSPRRTEPGYN 56

Query: 362 TNQKHNQRHNPPK 400
            N K+    +PPK
Sbjct: 57  KNDKNENYKHPPK 69


>ref|XP_002318696.1| predicted protein [Populus trichocarpa] gi|222859369|gb|EEE96916.1|
           predicted protein [Populus trichocarpa]
          Length = 81

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = +2

Query: 185 MANRGVALPKFGEWDLKNPGQAE-FSVIFEKARNAKKEGNRHKFNPDSPVFKKEPEATPF 361
           MA++G  LPKFGEWD+ NP  AE F+VIF KAR+ KK  N    +P   V  +  E    
Sbjct: 1   MASQGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTKN----SPAKVVSPRRTEPVFN 56

Query: 362 TNQKHNQRHNPPK 400
            N K+    +PPK
Sbjct: 57  KNAKNENYEHPPK 69


>ref|XP_002877610.1| hypothetical protein ARALYDRAFT_485205 [Arabidopsis lyrata subsp.
           lyrata] gi|297323448|gb|EFH53869.1| hypothetical protein
           ARALYDRAFT_485205 [Arabidopsis lyrata subsp. lyrata]
          Length = 85

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/68 (45%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = +2

Query: 191 NRGVALPKFGEWDLKNPGQAE-FSVIFEKARNAKKEGNRHKFNPDSPVFKKEPEATPFTN 367
           NR   LPKFGEWD  NP  AE F+VIF KAR+ KK        P+S V     E  P  N
Sbjct: 5   NRARPLPKFGEWDATNPASAEGFTVIFNKARDDKKTKKTAVAGPESIVSPPRNEEPPKNN 64

Query: 368 QKHNQRHN 391
             H+ R++
Sbjct: 65  NNHHNRNS 72


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