BLASTX nr result

ID: Cnidium21_contig00039011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039011
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302188.1| predicted protein [Populus trichocarpa] gi|2...   111   1e-22
ref|XP_002306685.1| predicted protein [Populus trichocarpa] gi|2...   111   2e-22
ref|XP_002526136.1| Protein MKS1, putative [Ricinus communis] gi...    97   2e-18
ref|XP_003634495.1| PREDICTED: protein MKS1-like [Vitis vinifera]      96   7e-18
emb|CBI35491.3| unnamed protein product [Vitis vinifera]               96   7e-18

>ref|XP_002302188.1| predicted protein [Populus trichocarpa] gi|222843914|gb|EEE81461.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  111 bits (278), Expect = 1e-22
 Identities = 73/167 (43%), Positives = 89/167 (53%), Gaps = 1/167 (0%)
 Frame = -1

Query: 708 QQQHPAH-RPPVIIYTVSPKIIHANPNEFMQLVQRLTGPNXXXXXXXXXXXXXXXXSFLQ 532
           Q Q P   RPPVIIYTVSPK+IH NPN+FM LVQRLTG +                 F  
Sbjct: 79  QNQPPTQQRPPVIIYTVSPKVIHTNPNDFMTLVQRLTGSS---------STSTSSNPFND 129

Query: 531 DTGAISPAARYASIEKIKSPEGNRNLQQNGHIQQMVEDVGLSADIDKITXXXXXXXXXXX 352
           D GAISPAAR+A+IEK  SP+  +  QQ G     VE +    +ID++            
Sbjct: 130 DCGAISPAARFATIEKANSPKDQQKQQQLGGDLGYVEGI---MEIDRV-MERPSLGPGIL 185

Query: 351 XXXXXXXXXXXXXLMSSDPNPLSFFHDLSPVLQTSRNYNIDGSFMPS 211
                          S D N +SFFHDLSP+L  +RN+ I+GSFMPS
Sbjct: 186 SPGPASLPPIPPNFFSPDQNSVSFFHDLSPILHGNRNF-IEGSFMPS 231


>ref|XP_002306685.1| predicted protein [Populus trichocarpa] gi|222856134|gb|EEE93681.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  111 bits (277), Expect = 2e-22
 Identities = 72/167 (43%), Positives = 89/167 (53%), Gaps = 2/167 (1%)
 Frame = -1

Query: 705 QQHPAHRPPVIIYTVSPKIIHANPNEFMQLVQRLTGPNXXXXXXXXXXXXXXXXSFLQDT 526
           QQ    RPPVIIYT+SPK+IH NPN+FM LVQRLTG +                    D 
Sbjct: 50  QQQIQPRPPVIIYTLSPKVIHTNPNDFMTLVQRLTGSSSTSTCSSTSTSSNPFND--HDC 107

Query: 525 GAISPAARYASIEKIKSPEGNRNLQQNGHIQQMVEDVGLSADIDKI--TXXXXXXXXXXX 352
           GAISPAARYA+IEK KSP+     Q  G +   VE +    +ID++              
Sbjct: 108 GAISPAARYATIEKAKSPKDQLKQQLGGDV-GFVEGI---MEIDQVMERTNLGPGILSPG 163

Query: 351 XXXXXXXXXXXXXLMSSDPNPLSFFHDLSPVLQTSRNYNIDGSFMPS 211
                          S+DPN +SFFHDLSP+L  +RN+ I+GSFMPS
Sbjct: 164 PASLPPIPPNFFSPASADPNSVSFFHDLSPILHGNRNF-IEGSFMPS 209


>ref|XP_002526136.1| Protein MKS1, putative [Ricinus communis]
           gi|223534513|gb|EEF36212.1| Protein MKS1, putative
           [Ricinus communis]
          Length = 254

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 69/179 (38%), Positives = 89/179 (49%), Gaps = 13/179 (7%)
 Frame = -1

Query: 708 QQQHPAHRPPVIIYTVSPKIIHANPNEFMQLVQRLTG---------PNXXXXXXXXXXXX 556
           Q Q    RPPVIIYTVSPK+IH NP++FM LVQRLTG          +            
Sbjct: 52  QYQQSQPRPPVIIYTVSPKVIHTNPSDFMNLVQRLTGSTSSSSSSSSSSAACSTSNPTSY 111

Query: 555 XXXXSFLQDTGAISPAARYASIEKIKSPEGNRNLQQNGHIQQMVEDVGL--SADIDKITX 382
                F   +GAISPAAR+A+IEK KSP  N N++Q     Q   DVG     ++ ++  
Sbjct: 112 SSSNPFNDYSGAISPAARFATIEKAKSP--NENMKQQ---VQPSGDVGFFEGIEMSQVME 166

Query: 381 XXXXXXXXXXXXXXXXXXXXXXXLMS--SDPNPLSFFHDLSPVLQTSRNYNIDGSFMPS 211
                                    S  SDPN +SF HDLSP L  +R++ ++G+FMPS
Sbjct: 167 RSGNLFHGILSPAPSSLPPISPNFFSPPSDPNMMSFLHDLSPALHGNRSF-LEGTFMPS 224


>ref|XP_003634495.1| PREDICTED: protein MKS1-like [Vitis vinifera]
          Length = 218

 Score = 95.9 bits (237), Expect = 7e-18
 Identities = 65/169 (38%), Positives = 85/169 (50%), Gaps = 3/169 (1%)
 Frame = -1

Query: 708 QQQHPAHRPPVIIYTVSPKIIHANPNEFMQLVQRLTGPNXXXXXXXXXXXXXXXXSFLQD 529
           Q QHP   PPVIIYTVSPKIIH  P+EFM LVQRLTG +                    D
Sbjct: 43  QAQHP---PPVIIYTVSPKIIHTQPSEFMTLVQRLTGLSSSSSSSAPL-----------D 88

Query: 528 TGAISPAARYASIEKIK---SPEGNRNLQQNGHIQQMVEDVGLSADIDKITXXXXXXXXX 358
           +GA+SPAAR+ASIEK K     E  + +Q +G +  +VE + +   +++           
Sbjct: 89  SGAVSPAARFASIEKTKVSAEEEKKKKMQSSGDV-DVVEGIEIGGGVER---SGWFPGIL 144

Query: 357 XXXXXXXXXXXXXXXLMSSDPNPLSFFHDLSPVLQTSRNYNIDGSFMPS 211
                              DP  L+ FHD SP +  ++NY I+GSFMPS
Sbjct: 145 SPGPSSLPAISPNFFSPGFDPYSLNIFHDFSPAVHGNKNY-IEGSFMPS 192


>emb|CBI35491.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score = 95.9 bits (237), Expect = 7e-18
 Identities = 65/169 (38%), Positives = 85/169 (50%), Gaps = 3/169 (1%)
 Frame = -1

Query: 708 QQQHPAHRPPVIIYTVSPKIIHANPNEFMQLVQRLTGPNXXXXXXXXXXXXXXXXSFLQD 529
           Q QHP   PPVIIYTVSPKIIH  P+EFM LVQRLTG +                    D
Sbjct: 55  QAQHP---PPVIIYTVSPKIIHTQPSEFMTLVQRLTGLSSSSSSSAPL-----------D 100

Query: 528 TGAISPAARYASIEKIK---SPEGNRNLQQNGHIQQMVEDVGLSADIDKITXXXXXXXXX 358
           +GA+SPAAR+ASIEK K     E  + +Q +G +  +VE + +   +++           
Sbjct: 101 SGAVSPAARFASIEKTKVSAEEEKKKKMQSSGDV-DVVEGIEIGGGVER---SGWFPGIL 156

Query: 357 XXXXXXXXXXXXXXXLMSSDPNPLSFFHDLSPVLQTSRNYNIDGSFMPS 211
                              DP  L+ FHD SP +  ++NY I+GSFMPS
Sbjct: 157 SPGPSSLPAISPNFFSPGFDPYSLNIFHDFSPAVHGNKNY-IEGSFMPS 204


Top