BLASTX nr result

ID: Cnidium21_contig00039002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039002
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65988.1| hypothetical protein VITISV_042145 [Vitis vinifera]   105   2e-26
emb|CBI39039.3| unnamed protein product [Vitis vinifera]              108   3e-22
ref|NP_085513.1| hypothetical protein ArthMp046 [Arabidopsis tha...   100   2e-19
dbj|BAF01764.1| hypothetical protein [Arabidopsis thaliana]            98   6e-19
ref|YP_717126.1| hypothetical protein BrnapMp028 [Brassica napus...    95   5e-18

>emb|CAN65988.1| hypothetical protein VITISV_042145 [Vitis vinifera]
          Length = 150

 Score =  105 bits (263), Expect(2) = 2e-26
 Identities = 50/60 (83%), Positives = 52/60 (86%)
 Frame = +3

Query: 3   LPSTHLSLYKNPLSRGEHKLPDEYVLDSRIHSRPDPPCNFLNIQKHSRRGLVMIFSKITR 182
           LPSTHLS+YK PL RGE KL DEYVLDSRIHSRPDPP NF N+ KHSRRG VMIFSKITR
Sbjct: 71  LPSTHLSIYKKPLPRGEQKLQDEYVLDSRIHSRPDPPWNFRNLPKHSRRGFVMIFSKITR 130



 Score = 38.5 bits (88), Expect(2) = 2e-26
 Identities = 17/21 (80%), Positives = 18/21 (85%)
 Frame = +2

Query: 296 FHSL*RKANCLLAGSCMSGNV 358
           F  + RKANCLLAGSCMSGNV
Sbjct: 125 FSKITRKANCLLAGSCMSGNV 145


>emb|CBI39039.3| unnamed protein product [Vitis vinifera]
          Length = 199

 Score =  108 bits (271), Expect = 3e-22
 Identities = 51/61 (83%), Positives = 53/61 (86%)
 Frame = +3

Query: 3   LPSTHLSLYKNPLSRGEHKLPDEYVLDSRIHSRPDPPCNFLNIQKHSRRGLVMIFSKITR 182
           LPSTHLS+YK PLSRGE KL DEYVLDSRIHSRPDPP NF N+ KHSRRG VMIFSKI R
Sbjct: 139 LPSTHLSIYKKPLSRGEQKLQDEYVLDSRIHSRPDPPWNFWNLPKHSRRGFVMIFSKIIR 198

Query: 183 C 185
           C
Sbjct: 199 C 199


>ref|NP_085513.1| hypothetical protein ArthMp046 [Arabidopsis thaliana]
           gi|42570727|ref|NP_973437.1| uncharacterized protein
           [Arabidopsis thaliana]
           gi|44888124|sp|P93308.1|M530_ARATH RecName:
           Full=Uncharacterized mitochondrial protein AtMg00530;
           AltName: Full=ORF109 gi|1785714|emb|CAA69737.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|330250966|gb|AEC06060.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 109

 Score =  100 bits (248), Expect = 2e-19
 Identities = 47/60 (78%), Positives = 51/60 (85%)
 Frame = +3

Query: 6   PSTHLSLYKNPLSRGEHKLPDEYVLDSRIHSRPDPPCNFLNIQKHSRRGLVMIFSKITRC 185
           PSTHLS++K  L RGE KL DEY LDSRIHSRPDP  NF N+QKHSR+GLVMIFSKITRC
Sbjct: 50  PSTHLSIHKKALPRGERKLQDEYALDSRIHSRPDPLWNFRNLQKHSRKGLVMIFSKITRC 109


>dbj|BAF01764.1| hypothetical protein [Arabidopsis thaliana]
          Length = 109

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/60 (76%), Positives = 50/60 (83%)
 Frame = +3

Query: 6   PSTHLSLYKNPLSRGEHKLPDEYVLDSRIHSRPDPPCNFLNIQKHSRRGLVMIFSKITRC 185
           PSTHL ++K  L RGE KL DEY LDSRIHSRPDP  NF N+QKHSR+GLVMIFSKITRC
Sbjct: 50  PSTHLPIHKKALPRGERKLQDEYALDSRIHSRPDPLWNFRNLQKHSRKGLVMIFSKITRC 109


>ref|YP_717126.1| hypothetical protein BrnapMp028 [Brassica napus]
           gi|353526373|ref|YP_004927448.1| orf159 (mitochondrion)
           [Brassica oleracea] gi|353526526|ref|YP_004927596.1|
           orf159 (mitochondrion) [Brassica carinata]
           gi|353526717|ref|YP_004927888.1| orf159 (mitochondrion)
           [Brassica rapa subsp. campestris]
           gi|353531399|ref|YP_004927791.1| orf159 (mitochondrion)
           [Brassica juncea] gi|37591072|dbj|BAC98874.1|
           hypothetical protein [Brassica napus]
           gi|335354905|gb|AEH43461.1| orf159 [Brassica rapa subsp.
           campestris] gi|335354918|gb|AEH43473.1| orf159 [Brassica
           oleracea] gi|335355057|gb|AEH43611.1| orf159 [Brassica
           carinata] gi|335355132|gb|AEH43685.1| orf159 [Brassica
           juncea] gi|339511333|emb|CBX48388.1| unnamed protein
           product [Brassica napus]
          Length = 159

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 45/59 (76%), Positives = 49/59 (83%)
 Frame = +3

Query: 9   STHLSLYKNPLSRGEHKLPDEYVLDSRIHSRPDPPCNFLNIQKHSRRGLVMIFSKITRC 185
           S HLS++K  L RGE KL DEY LDSRIHSRPDP  NF N+QKHSR+GLVMIFSKITRC
Sbjct: 101 SPHLSIHKKALPRGERKLQDEYALDSRIHSRPDPLWNFRNLQKHSRKGLVMIFSKITRC 159


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