BLASTX nr result

ID: Cnidium21_contig00038971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038971
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   106   2e-21
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   102   3e-20
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                   100   1e-19
emb|CAN72562.1| hypothetical protein VITISV_032210 [Vitis vinifera]    98   6e-19
ref|XP_004163160.1| PREDICTED: uncharacterized protein LOC101224...    87   1e-15

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/98 (54%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
 Frame = +2

Query: 2    RLELPSTCKLHPVFYVSQLKKAIGQLPVAPTIPPQLTHDLILEVEPMAVLGTRIAKDNRG 181
            +L+LP   KLHPVF++SQLKKA+G L  +PTIPPQLT+DL+L+ +P ++L  R       
Sbjct: 1430 QLQLPLGAKLHPVFHISQLKKAVGSLQSSPTIPPQLTNDLVLDAQPESLLNIRSHPQKPA 1489

Query: 182  -LTEVLIHWTGLQEWEATWEDFQQIQDLFPHFHLEDKV 292
             +TEVLI W  L  +EATWED       FP FHLEDKV
Sbjct: 1490 EVTEVLIKWLNLPAFEATWEDAALFNARFPDFHLEDKV 1527


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  102 bits (255), Expect = 3e-20
 Identities = 52/98 (53%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
 Frame = +2

Query: 2    RLELPSTCKLHPVFYVSQLKKAIGQLPVAPTIPPQLTHDLILEVEPMAVLGTR-IAKDNR 178
            +L+LP + K+HPVF+VS LKK +G  PV PTIPP +  D+ L VEP  +L  R I +  +
Sbjct: 1497 KLQLPPSSKIHPVFHVSLLKKVVGNTPVLPTIPPHIDVDMELVVEPEELLDVRQIRQGKQ 1556

Query: 179  GLTEVLIHWTGLQEWEATWEDFQQIQDLFPHFHLEDKV 292
              TE LI W GL  +EATWED   I   FP FHLEDKV
Sbjct: 1557 TFTECLIKWKGLPAFEATWEDMSPIHLRFPSFHLEDKV 1594


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score =  100 bits (250), Expect = 1e-19
 Identities = 49/97 (50%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
 Frame = +2

Query: 5    LELPSTCKLHPVFYVSQLKKAIGQLPVAPTIPPQLTHDLILEVEPMAVLGTRIAKDNRGL 184
            L+LP   K+HPVF++SQL+KA+G  PV P +PP LT DL+L   P  VLG R    N+  
Sbjct: 1267 LDLPPHSKIHPVFHISQLRKAVGTAPVFPVLPPLLTTDLVLPSSPSQVLGIRPNPLNQAA 1326

Query: 185  -TEVLIHWTGLQEWEATWEDFQQIQDLFPHFHLEDKV 292
              E+L+ W+ +   EATWE+ Q I + FP FHLEDKV
Sbjct: 1327 PAEILVQWSDMSADEATWENVQDIHERFPTFHLEDKV 1363


>emb|CAN72562.1| hypothetical protein VITISV_032210 [Vitis vinifera]
          Length = 1003

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 47/98 (47%), Positives = 66/98 (67%), Gaps = 1/98 (1%)
 Frame = +2

Query: 2   RLELPSTCKLHPVFYVSQLKKAIGQLPVAPTIPPQLTHDLILEVEPMAVLGTR-IAKDNR 178
           RL LP +  +HP+F++SQL+KA+G  P + ++P QLT ++ L VEP  +LG R     + 
Sbjct: 702 RLTLPPSSTIHPMFHISQLRKAVGTAPTSSSLPSQLTAEMELLVEPRTILGVRQCLTGST 761

Query: 179 GLTEVLIHWTGLQEWEATWEDFQQIQDLFPHFHLEDKV 292
            +TEVL+ W  L ++EATWE F  IQ+ FP FHL DKV
Sbjct: 762 FVTEVLVQWKDLLDFEATWESFATIQNQFPEFHLVDKV 799


>ref|XP_004163160.1| PREDICTED: uncharacterized protein LOC101224183 [Cucumis sativus]
          Length = 186

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 48/97 (49%), Positives = 57/97 (58%)
 Frame = +2

Query: 2   RLELPSTCKLHPVFYVSQLKKAIGQLPVAPTIPPQLTHDLILEVEPMAVLGTRIAKDNRG 181
           RLELP+   +HPVF+VSQLKKA G+      + P LT D   +  P    G R  K+  G
Sbjct: 60  RLELPAAATIHPVFHVSQLKKAFGESTNNKELLPFLTADHEWKAVPQETNGYR--KNEAG 117

Query: 182 LTEVLIHWTGLQEWEATWEDFQQIQDLFPHFHLEDKV 292
             EVLI+W GL   EATWE +   Q  FP FHLEDKV
Sbjct: 118 GWEVLINWEGLPHHEATWEGYDDFQQSFPDFHLEDKV 154


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