BLASTX nr result

ID: Cnidium21_contig00038950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038950
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629175.1| Acyl coa ligase acetate-coa synthetase-like ...   188   3e-46
ref|XP_003604534.1| NBS-containing resistance-like protein [Medi...   187   5e-46
ref|XP_003605369.1| Repetitive proline-rich cell wall protein [M...   166   2e-39
gb|ABA93844.2| retrotransposon protein, putative, unclassified [...   158   4e-37
gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc...   155   4e-36

>ref|XP_003629175.1| Acyl coa ligase acetate-coa synthetase-like protein [Medicago
           truncatula] gi|355523197|gb|AET03651.1| Acyl coa ligase
           acetate-coa synthetase-like protein [Medicago
           truncatula]
          Length = 732

 Score =  188 bits (478), Expect = 3e-46
 Identities = 96/117 (82%), Positives = 100/117 (85%)
 Frame = +1

Query: 1   DNLIYWSSKRQPTLSWSSAEAEYRGVTNVVVSESCWLRNLLVKLHCPVHKATLVYSYNVS 180
           DNLI WSSKRQP LS SS EAEYR V NVV SE CW+RNL  +LH P+H ATLVY  NVS
Sbjct: 104 DNLISWSSKRQPILSRSSVEAEYRSVVNVV-SELCWIRNLFRELHFPIHHATLVYCDNVS 162

Query: 181 AIYLSGNPVQLQRTKHIDMDIHFVREKVARGQVRVLHVPSRYQIADIFTKGLPHILF 351
           AIYLSGNPVQ QRTKHI+MDIHFVREKVARGQ  VLHVPSRYQIADIFTKGLPHILF
Sbjct: 163 AIYLSGNPVQHQRTKHIEMDIHFVREKVARGQACVLHVPSRYQIADIFTKGLPHILF 219


>ref|XP_003604534.1| NBS-containing resistance-like protein [Medicago truncatula]
           gi|355505589|gb|AES86731.1| NBS-containing
           resistance-like protein [Medicago truncatula]
          Length = 1302

 Score =  187 bits (474), Expect(2) = 5e-46
 Identities = 95/117 (81%), Positives = 102/117 (87%)
 Frame = +1

Query: 1   DNLIYWSSKRQPTLSWSSAEAEYRGVTNVVVSESCWLRNLLVKLHCPVHKATLVYSYNVS 180
           DNLI WS+KRQ TLS SSAEAEY GV NVV S+SCW+RNLL++LHCP   ATLVY  NVS
Sbjct: 439 DNLISWSAKRQHTLSRSSAEAEYHGVANVV-SKSCWIRNLLLELHCPATTATLVYCDNVS 497

Query: 181 AIYLSGNPVQLQRTKHIDMDIHFVREKVARGQVRVLHVPSRYQIADIFTKGLPHILF 351
            +YLSGNPVQ QRTKHI+MDIHFVREKVARGQVRVLHVPSRYQIADIFTKGLP  LF
Sbjct: 498 VVYLSGNPVQHQRTKHIEMDIHFVREKVARGQVRVLHVPSRYQIADIFTKGLPLQLF 554



 Score = 22.7 bits (47), Expect(2) = 5e-46
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +2

Query: 353 SLSIREPPVST 385
           SL+IR+PPVST
Sbjct: 560 SLNIRQPPVST 570


>ref|XP_003605369.1| Repetitive proline-rich cell wall protein [Medicago truncatula]
           gi|355506424|gb|AES87566.1| Repetitive proline-rich cell
           wall protein [Medicago truncatula]
          Length = 305

 Score =  166 bits (419), Expect = 2e-39
 Identities = 89/132 (67%), Positives = 103/132 (78%)
 Frame = +1

Query: 1   DNLIYWSSKRQPTLSWSSAEAEYRGVTNVVVSESCWLRNLLVKLHCPVHKATLVYSYNVS 180
           DN+I WSSK  PTLS S+AE EYRGV NVV S+SCW+ NLL++LHC V KATLVY  NVS
Sbjct: 171 DNIISWSSKHHPTLSRSNAEVEYRGVANVV-SDSCWICNLLLELHCTVCKATLVYCDNVS 229

Query: 181 AIYLSGNPVQLQRTKHIDMDIHFVREKVARGQVRVLHVPSRYQIADIFTKGLPHILFKSQ 360
           AIYLS N VQ QRTKHI+M IHFVREKVARG V+V +VPSR QI DIFTKGLP ILF+  
Sbjct: 230 AIYLSKNLVQHQRTKHIEMYIHFVREKVARGDVQVRYVPSRCQIGDIFTKGLPLILFEDF 289

Query: 361 HSGTSCFDLILS 396
           +   +  D ++S
Sbjct: 290 YICLNVCDPLVS 301


>gb|ABA93844.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1099

 Score =  158 bits (400), Expect = 4e-37
 Identities = 80/117 (68%), Positives = 94/117 (80%)
 Frame = +1

Query: 1    DNLIYWSSKRQPTLSWSSAEAEYRGVTNVVVSESCWLRNLLVKLHCPVHKATLVYSYNVS 180
            DNL+ WSSKRQ T+S SSAEAEYR + N V +E+CWLR LL +LH P  KATLVY  NVS
Sbjct: 974  DNLVSWSSKRQHTVSRSSAEAEYRAMANAV-AETCWLRQLLHELHTPPSKATLVYCDNVS 1032

Query: 181  AIYLSGNPVQLQRTKHIDMDIHFVREKVARGQVRVLHVPSRYQIADIFTKGLPHILF 351
            A+YLS NPVQ QRTKH+++D+HFVR++VA G VRVLHVP+  Q ADIFTKGLP  LF
Sbjct: 1033 AVYLSTNPVQHQRTKHVEIDLHFVRDRVAVGSVRVLHVPTTSQYADIFTKGLPSSLF 1089


>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1597

 Score =  155 bits (391), Expect = 4e-36
 Identities = 80/117 (68%), Positives = 92/117 (78%)
 Frame = +1

Query: 1    DNLIYWSSKRQPTLSWSSAEAEYRGVTNVVVSESCWLRNLLVKLHCPVHKATLVYSYNVS 180
            DNL+ WSSKRQ T+S SSAEAEYR V N V +E+ WLR LL +LH P  KATLVY  NVS
Sbjct: 1462 DNLVSWSSKRQNTVSRSSAEAEYRAVANAV-AEASWLRQLLHELHSPPSKATLVYCDNVS 1520

Query: 181  AIYLSGNPVQLQRTKHIDMDIHFVREKVARGQVRVLHVPSRYQIADIFTKGLPHILF 351
            A+YLS NPVQ QRTKH+ +D+HFVR+KVA G VRVLHVP+  Q ADIFTKGLP  +F
Sbjct: 1521 AVYLSSNPVQHQRTKHVKIDLHFVRDKVALGAVRVLHVPTSSQYADIFTKGLPSPVF 1577


Top