BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038931
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24922.3| unnamed protein product [Vitis vinifera]              165   3e-39
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...   165   3e-39
gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984...   164   7e-39
ref|XP_001758663.1| predicted protein [Physcomitrella patens sub...   154   7e-36
ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35

>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score =  165 bits (418), Expect = 3e-39
 Identities = 81/127 (63%), Positives = 99/127 (77%)
 Frame = +3

Query: 12   TKEDGATYTVSGLIEEIDENTLEITELPILRWTKDYKEFLESMMTGNDKMKEPFIKDYRD 191
            TK++   YTV G+IEE++E TL I+ELP+ +WT+DYKEFLES+MTGNDK+K+PFIKD   
Sbjct: 888  TKQESVGYTVKGIIEEVNETTLRISELPVRKWTQDYKEFLESIMTGNDKIKDPFIKD--- 944

Query: 192  NGSQDYRFYRDNGDDVTVKLLVTMSEENLLMAKQEGLLKKFKLTTTISTSNMYLFDSKGV 371
                    Y+++ DD TV   V MSEENLLMAKQEGLL+KFKLTT ISTSNM+LFDS G 
Sbjct: 945  --------YKEHNDDTTVHFEVIMSEENLLMAKQEGLLQKFKLTTKISTSNMHLFDSNGT 996

Query: 372  IKKYDNP 392
            IKKY+ P
Sbjct: 997  IKKYETP 1003


>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score =  165 bits (418), Expect = 3e-39
 Identities = 81/127 (63%), Positives = 99/127 (77%)
 Frame = +3

Query: 12   TKEDGATYTVSGLIEEIDENTLEITELPILRWTKDYKEFLESMMTGNDKMKEPFIKDYRD 191
            TK++   YTV G+IEE++E TL I+ELP+ +WT+DYKEFLES+MTGNDK+K+PFIKD   
Sbjct: 888  TKQESVGYTVKGIIEEVNETTLRISELPVRKWTQDYKEFLESIMTGNDKIKDPFIKD--- 944

Query: 192  NGSQDYRFYRDNGDDVTVKLLVTMSEENLLMAKQEGLLKKFKLTTTISTSNMYLFDSKGV 371
                    Y+++ DD TV   V MSEENLLMAKQEGLL+KFKLTT ISTSNM+LFDS G 
Sbjct: 945  --------YKEHNDDTTVHFEVIMSEENLLMAKQEGLLQKFKLTTKISTSNMHLFDSNGT 996

Query: 372  IKKYDNP 392
            IKKY+ P
Sbjct: 997  IKKYETP 1003


>gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984168|gb|AAN85208.1|
            DNA topoisomerase II [Nicotiana tabacum]
          Length = 1482

 Score =  164 bits (415), Expect = 7e-39
 Identities = 84/130 (64%), Positives = 100/130 (76%)
 Frame = +3

Query: 3    KTATKEDGATYTVSGLIEEIDENTLEITELPILRWTKDYKEFLESMMTGNDKMKEPFIKD 182
            KTATKE GATYTV+G+IEE++E TL I+ELP+ RWT+DYK+FLESM   NDK K+PFIK+
Sbjct: 880  KTATKEAGATYTVTGIIEEVNETTLRISELPVRRWTEDYKQFLESMTVSNDKAKDPFIKE 939

Query: 183  YRDNGSQDYRFYRDNGDDVTVKLLVTMSEENLLMAKQEGLLKKFKLTTTISTSNMYLFDS 362
                        R  GD+ +V   V MSEENL++A+QEGLLKKFKL TTISTSNM+LFDS
Sbjct: 940  -----------VRAYGDENSVCFEVIMSEENLILAQQEGLLKKFKLATTISTSNMHLFDS 988

Query: 363  KGVIKKYDNP 392
             G IKKYDNP
Sbjct: 989  NGKIKKYDNP 998


>ref|XP_001758663.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162690273|gb|EDQ76641.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 1238

 Score =  154 bits (389), Expect = 7e-36
 Identities = 74/129 (57%), Positives = 100/129 (77%)
 Frame = +3

Query: 6    TATKEDGATYTVSGLIEEIDENTLEITELPILRWTKDYKEFLESMMTGNDKMKEPFIKDY 185
            +ATK+ G TYT++G IE+IDE T++I ELP+ +WT+DYKEFL+++MT +DK KEPFIKD+
Sbjct: 886  SATKDIGLTYTITGTIEQIDETTIKILELPVRKWTQDYKEFLDALMTPSDKNKEPFIKDF 945

Query: 186  RDNGSQDYRFYRDNGDDVTVKLLVTMSEENLLMAKQEGLLKKFKLTTTISTSNMYLFDSK 365
            R++ +           D  V   +T+SEEN+ +A  EGL+KKFKLTTTISTSNM+LFD+K
Sbjct: 946  REHNT-----------DTKVHFELTLSEENMAIALAEGLVKKFKLTTTISTSNMHLFDAK 994

Query: 366  GVIKKYDNP 392
            G+IKKYD P
Sbjct: 995  GIIKKYDTP 1003


>ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|222845679|gb|EEE83226.1|
            predicted protein [Populus trichocarpa]
          Length = 1468

 Score =  153 bits (386), Expect = 2e-35
 Identities = 82/135 (60%), Positives = 97/135 (71%), Gaps = 5/135 (3%)
 Frame = +3

Query: 3    KTATKEDGATYTVSGLIEEIDENTLEITELPILRWTKDYKEFLESMMTGN-----DKMKE 167
            K A+KE G +YTV+G+I E++E TL ITELPI RWT DYK FL S+  GN     +  K+
Sbjct: 881  KGASKEAGCSYTVNGVINEVNETTLRITELPIRRWTDDYKAFLNSVTEGNRDENGNLPKD 940

Query: 168  PFIKDYRDNGSQDYRFYRDNGDDVTVKLLVTMSEENLLMAKQEGLLKKFKLTTTISTSNM 347
            PFIKD+R  G           DD TV   V +SEEN+++AKQEGLLKKFKLTTTISTSNM
Sbjct: 941  PFIKDFRKYG-----------DDATVVFEVLLSEENMMIAKQEGLLKKFKLTTTISTSNM 989

Query: 348  YLFDSKGVIKKYDNP 392
            +LFDS GVIKKYDNP
Sbjct: 990  HLFDSAGVIKKYDNP 1004