BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038901
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325018.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   136   2e-30
ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat...   134   8e-30
ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containi...   134   1e-29
ref|XP_002526186.1| pentatricopeptide repeat-containing protein,...   133   2e-29

>ref|XP_002325018.1| predicted protein [Populus trichocarpa] gi|222866452|gb|EEF03583.1|
           predicted protein [Populus trichocarpa]
          Length = 695

 Score =  139 bits (351), Expect = 2e-31
 Identities = 68/103 (66%), Positives = 82/103 (79%)
 Frame = +3

Query: 6   VDDLQVFFDGMPCCDSVSYNTVISGLASNGCCKEALKVFVRMQKEGFDFTDYTLVSVLNA 185
           V+DL+V FD MP  DSVSYNTVISG A NG    AL VF+RMQKEG   T+YT VSVLNA
Sbjct: 105 VEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNA 164

Query: 186 CSRVLGLRFGKEIHGRIVVCGFGGNVFVWNALVDMYAKCGQIE 314
           C+++L LR GK+IHGRI++C  GGNVFV NAL D+YA+CG+I+
Sbjct: 165 CTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEID 207



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 34/100 (34%), Positives = 57/100 (57%)
 Frame = +3

Query: 6   VDDLQVFFDGMPCCDSVSYNTVISGLASNGCCKEALKVFVRMQKEGFDFTDYTLVSVLNA 185
           +D+ +  F  +   D V +  +I G A NG  ++AL +F  M  E      YT+ SV+++
Sbjct: 272 IDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSS 331

Query: 186 CSRVLGLRFGKEIHGRIVVCGFGGNVFVWNALVDMYAKCG 305
           C+++  L  G+ +HG+  + G   ++ V +ALVDMY KCG
Sbjct: 332 CAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCG 371


>ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  136 bits (343), Expect = 2e-30
 Identities = 62/104 (59%), Positives = 84/104 (80%)
 Frame = +3

Query: 3   SVDDLQVFFDGMPCCDSVSYNTVISGLASNGCCKEALKVFVRMQKEGFDFTDYTLVSVLN 182
           S+ +L+  FD MP  DSVSYNT I+G + N C +E+L++F RMQ+EGF+ T+YT+VS+LN
Sbjct: 104 SIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILN 163

Query: 183 ACSRVLGLRFGKEIHGRIVVCGFGGNVFVWNALVDMYAKCGQIE 314
           A +++L LR+GK+IHG I+V  F GNVF+WNAL DMYAKCG+IE
Sbjct: 164 ASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIE 207



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/103 (34%), Positives = 61/103 (59%)
 Frame = +3

Query: 6   VDDLQVFFDGMPCCDSVSYNTVISGLASNGCCKEALKVFVRMQKEGFDFTDYTLVSVLNA 185
           VD+ +  F      D V +  ++ G A NG  ++AL +F  M  E  +   YTL SV+++
Sbjct: 272 VDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSS 331

Query: 186 CSRVLGLRFGKEIHGRIVVCGFGGNVFVWNALVDMYAKCGQIE 314
           C+++  L  G+ +HG+ ++ G   N+ V +AL+DMY+KCG I+
Sbjct: 332 CAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFID 374


>ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  134 bits (337), Expect = 8e-30
 Identities = 61/104 (58%), Positives = 83/104 (79%)
 Frame = +3

Query: 3   SVDDLQVFFDGMPCCDSVSYNTVISGLASNGCCKEALKVFVRMQKEGFDFTDYTLVSVLN 182
           S+ +L+  FD MP  DSVSYNT I+G + N C +E+L++F RMQ+EGF+ T+YT+VS+LN
Sbjct: 104 SIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILN 163

Query: 183 ACSRVLGLRFGKEIHGRIVVCGFGGNVFVWNALVDMYAKCGQIE 314
           A +++  LR+GK+IHG I+V  F GNVF+WNAL DMYAKCG+IE
Sbjct: 164 ASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIE 207



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/103 (34%), Positives = 61/103 (59%)
 Frame = +3

Query: 6   VDDLQVFFDGMPCCDSVSYNTVISGLASNGCCKEALKVFVRMQKEGFDFTDYTLVSVLNA 185
           VD+ +  F      D V +  ++ G A NG  ++AL +F  M  E  +   YTL SV+++
Sbjct: 272 VDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSS 331

Query: 186 CSRVLGLRFGKEIHGRIVVCGFGGNVFVWNALVDMYAKCGQIE 314
           C+++  L  G+ +HG+ ++ G   N+ V +AL+DMY+KCG I+
Sbjct: 332 CAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFID 374


>ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
           gi|297738773|emb|CBI28018.3| unnamed protein product
           [Vitis vinifera]
          Length = 695

 Score =  134 bits (336), Expect = 1e-29
 Identities = 62/104 (59%), Positives = 82/104 (78%)
 Frame = +3

Query: 3   SVDDLQVFFDGMPCCDSVSYNTVISGLASNGCCKEALKVFVRMQKEGFDFTDYTLVSVLN 182
           +V+DL+  FD M   D+VSYNTVI+G + NGC  +AL+ FVRMQ+EGF+ TDYT VSVL+
Sbjct: 104 NVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLH 163

Query: 183 ACSRVLGLRFGKEIHGRIVVCGFGGNVFVWNALVDMYAKCGQIE 314
           ACS++L ++ GK+IHGRIV    G +VFVWNAL +MYAKCG ++
Sbjct: 164 ACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALD 207



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 33/87 (37%), Positives = 56/87 (64%)
 Frame = +3

Query: 48  DSVSYNTVISGLASNGCCKEALKVFVRMQKEGFDFTDYTLVSVLNACSRVLGLRFGKEIH 227
           D V + T++ G A NG  ++AL +F  M  E     ++T+ SV+++C+R+  L  G+ +H
Sbjct: 286 DKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVH 345

Query: 228 GRIVVCGFGGNVFVWNALVDMYAKCGQ 308
           G+ V+ G   ++ V +ALVDMY+KCG+
Sbjct: 346 GKAVIFGVDHDLLVSSALVDMYSKCGE 372


>ref|XP_002526186.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534490|gb|EEF36190.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 446

 Score =  133 bits (334), Expect = 2e-29
 Identities = 66/104 (63%), Positives = 82/104 (78%), Gaps = 1/104 (0%)
 Frame = +3

Query: 6   VDDLQVFFDGMPCCDSVSYNTVISGLASNGCCKEALKVFVRMQKEGFDFTDYTLVSVLNA 185
           V+DL+V FD MP  DSVSYNTVI+G A NG   +A++ FVRMQ EGF  T+YT VSVLNA
Sbjct: 106 VEDLRVVFDDMPSRDSVSYNTVITGFAKNGRAGKAVEAFVRMQTEGFKPTEYTHVSVLNA 165

Query: 186 CSRVLGLRFGKEIHGRIVVCGF-GGNVFVWNALVDMYAKCGQIE 314
           C+++L LR GK+IHGRI+   + GGNVF+WNAL DMYAKC +I+
Sbjct: 166 CTQLLDLRKGKQIHGRILTGNYLGGNVFIWNALTDMYAKCKEID 209



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/86 (37%), Positives = 49/86 (56%)
 Frame = +3

Query: 48  DSVSYNTVISGLASNGCCKEALKVFVRMQKEGFDFTDYTLVSVLNACSRVLGLRFGKEIH 227
           D V + T+I G   NG  + AL +F  M  E      YT+ SV+++C+++  L  G+ IH
Sbjct: 288 DKVCWTTMIVGYTQNGKEENALMLFNEML-ENVRPDSYTISSVVSSCAKLASLIHGQVIH 346

Query: 228 GRIVVCGFGGNVFVWNALVDMYAKCG 305
           G  ++ G   ++ V  +LVDMY KCG
Sbjct: 347 GIALLMGIDDDLLVSTSLVDMYCKCG 372