BLASTX nr result

ID: Cnidium21_contig00038898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038898
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301798.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002265336.2| PREDICTED: RPM1-interacting protein 4-like [...    83   2e-14
ref|XP_002518052.1| hypothetical protein RCOM_1018070 [Ricinus c...    83   3e-14
emb|CAN63304.1| hypothetical protein VITISV_002333 [Vitis vinifera]    81   8e-14
gb|ACZ64259.1| RPM1 interacting protein 4 transcript 2b [Lactuca...    77   2e-12

>ref|XP_002301798.1| predicted protein [Populus trichocarpa] gi|222843524|gb|EEE81071.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 48/92 (52%), Positives = 58/92 (63%), Gaps = 6/92 (6%)
 Frame = +3

Query: 39  MTQRSQLPKFGNWENEDNVPYTVYFENARKGKRGNKM-NPS----NPDQVSDDRSPVQVT 203
           M QRS +PKFGNWE+E+NVPYT YF+ ARKG+ G KM NP+    NPD VSD  +P Q  
Sbjct: 1   MAQRSHVPKFGNWESEENVPYTAYFDKARKGRTGGKMINPNDPQENPDLVSDYAAPDQAP 60

Query: 204 SFEEKA-ELEVNGPETEKSRHKHHMSREEGEL 296
            F  KA   E  G    +  H+H  SREE +L
Sbjct: 61  PFRAKAPPEEAAGQGAVRQAHEHRTSREESDL 92


>ref|XP_002265336.2| PREDICTED: RPM1-interacting protein 4-like [Vitis vinifera]
          Length = 261

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 49/121 (40%), Positives = 68/121 (56%), Gaps = 18/121 (14%)
 Frame = +3

Query: 39  MTQRSQLPKFGNWENEDNVPYTVYFENARKGKRGNK-MNPS----NPDQVSDDRSPVQVT 203
           M QRS +PKFGNWE+E+NVPYT YF+ ARKG+ G K +NP+    NPD  SD+ S  +  
Sbjct: 1   MAQRSHVPKFGNWESEENVPYTAYFDKARKGRTGTKIINPNDPQENPDMFSDNASEARSP 60

Query: 204 SFEEKAELEVNGPETEKSRHKHHMSREEGELTPVQITD-------------IESSHQHHG 344
                 + E  G   ++  H+H +S+E+G+    Q+TD              ES+HQ  G
Sbjct: 61  PRTRAEQEESIG---QQVTHEHRLSKEDGD--QKQVTDSPARNDNLGRRPSTESTHQRQG 115

Query: 345 G 347
           G
Sbjct: 116 G 116


>ref|XP_002518052.1| hypothetical protein RCOM_1018070 [Ricinus communis]
           gi|223542648|gb|EEF44185.1| hypothetical protein
           RCOM_1018070 [Ricinus communis]
          Length = 162

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
 Frame = +3

Query: 39  MTQRSQLPKFGNWENEDNVPYTVYFENARKGKRGNKMNPSNPDQVSD---DRSPVQVTSF 209
           M QRS +PKFGNWE E+NVPYTVYFE ARKG    KM  ++P Q  D    +  +Q +SF
Sbjct: 1   MAQRSAVPKFGNWETEENVPYTVYFEKARKGNTAGKMKGNDPKQKPDTVTTKPSIQTSSF 60

Query: 210 EEKAELEVNGPETEKSRHKHHMSREEGELTPVQITDIESSH 332
             K+     G E  +S+H+   + ++  L  V   D  S H
Sbjct: 61  RMKSIGAQRGQEAVRSKHEQGGNNQQRRLRSVNRGDDSSDH 101


>emb|CAN63304.1| hypothetical protein VITISV_002333 [Vitis vinifera]
          Length = 599

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 18/119 (15%)
 Frame = +3

Query: 45  QRSQLPKFGNWENEDNVPYTVYFENARKGKRGNK-MNPS----NPDQVSDDRSPVQVTSF 209
           QRS +PKFGNWE+E+NVPYT YF+ ARKG+ G K +NP+    NPD  SD+ S  +    
Sbjct: 10  QRSHVPKFGNWESEENVPYTAYFDKARKGRTGTKIINPNDPQENPDMFSDNASEARSPPR 69

Query: 210 EEKAELEVNGPETEKSRHKHHMSREEGELTPVQITD-------------IESSHQHHGG 347
               + E  G   ++  H+H +S+E+G+    Q+TD              ES+HQ  GG
Sbjct: 70  TRAEQEESIG---QQVTHEHRLSKEDGD--QKQVTDSPARNDNLGRRPSTESTHQRQGG 123


>gb|ACZ64259.1| RPM1 interacting protein 4 transcript 2b [Lactuca tatarica]
          Length = 243

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 44/93 (47%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
 Frame = +3

Query: 39  MTQRSQLPKFGNWENEDNVPYTVYFENARKGKRGNKM-NPS----NPDQVSDDRSPVQVT 203
           M QR  +PKFGNWE+EDNVPYTVYF+ ARKGK G KM NP+    NP+  +D   P    
Sbjct: 1   MAQRPTVPKFGNWESEDNVPYTVYFDKARKGKTGGKMINPNDPQENPEMFADKTPPTPPR 60

Query: 204 SFEEKAELEVNGPETEKSRHKHHMSREEGELTP 302
           S  +        PE    R     SREE E  P
Sbjct: 61  SRPQ--------PEEPVGRRAVRPSREENEYQP 85


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