BLASTX nr result

ID: Cnidium21_contig00038886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038886
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317476.1| predicted protein [Populus trichocarpa] gi|2...   111   9e-23
ref|XP_002283733.1| PREDICTED: ribokinase [Vitis vinifera]            110   2e-22
emb|CAN73058.1| hypothetical protein VITISV_007599 [Vitis vinifera]   110   2e-22
ref|XP_004156504.1| PREDICTED: LOW QUALITY PROTEIN: ribokinase-l...   106   3e-21
ref|XP_004137244.1| PREDICTED: ribokinase-like [Cucumis sativus]      106   3e-21

>ref|XP_002317476.1| predicted protein [Populus trichocarpa] gi|222860541|gb|EEE98088.1|
           predicted protein [Populus trichocarpa]
          Length = 376

 Score =  111 bits (277), Expect = 9e-23
 Identities = 52/59 (88%), Positives = 56/59 (94%)
 Frame = +2

Query: 377 GSANADIYVEIDRLPLQGETISAKTGQTLAGGKGANQAVCSAKLNYPTFFVGQVGQDAH 553
           GSANADIYVEIDRLP +GETISAKTGQTLAGGKGANQA C AKL+YPT+FVGQVG+DAH
Sbjct: 75  GSANADIYVEIDRLPAEGETISAKTGQTLAGGKGANQAACGAKLSYPTYFVGQVGEDAH 133


>ref|XP_002283733.1| PREDICTED: ribokinase [Vitis vinifera]
          Length = 371

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
 Frame = +2

Query: 287 KSKTPFPNLVIKSSXXXXXXXXXXXXXXXX-GSANADIYVEIDRLPLQGETISAKTGQTL 463
           +S++PFP+L + +S                 GSANADIYVEIDRLP +GET+SAK GQTL
Sbjct: 39  QSRSPFPSLSLNASKAPSPQTQVTGPPLVVVGSANADIYVEIDRLPKEGETVSAKHGQTL 98

Query: 464 AGGKGANQAVCSAKLNYPTFFVGQVGQDAH 553
           AGGKGANQA C  KL+YPT+FVGQVG+DAH
Sbjct: 99  AGGKGANQAACGGKLSYPTYFVGQVGEDAH 128


>emb|CAN73058.1| hypothetical protein VITISV_007599 [Vitis vinifera]
          Length = 370

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
 Frame = +2

Query: 287 KSKTPFPNLVIKSSXXXXXXXXXXXXXXXX-GSANADIYVEIDRLPLQGETISAKTGQTL 463
           +S++PFP+L + +S                 GSANADIYVEIDRLP +GET+SAK GQTL
Sbjct: 38  QSRSPFPSLSLNASKAPSPQTQVTGPPLVVVGSANADIYVEIDRLPKEGETVSAKHGQTL 97

Query: 464 AGGKGANQAVCSAKLNYPTFFVGQVGQDAH 553
           AGGKGANQA C  KL+YPT+FVGQVG+DAH
Sbjct: 98  AGGKGANQAACGGKLSYPTYFVGQVGEDAH 127


>ref|XP_004156504.1| PREDICTED: LOW QUALITY PROTEIN: ribokinase-like [Cucumis sativus]
          Length = 370

 Score =  106 bits (264), Expect = 3e-21
 Identities = 50/59 (84%), Positives = 54/59 (91%)
 Frame = +2

Query: 377 GSANADIYVEIDRLPLQGETISAKTGQTLAGGKGANQAVCSAKLNYPTFFVGQVGQDAH 553
           GSANADIYVEIDRLP +GETISAK+GQTLAGGKGANQA C  KL YPT+FVGQVG+DAH
Sbjct: 69  GSANADIYVEIDRLPEEGETISAKSGQTLAGGKGANQACCGGKLEYPTYFVGQVGKDAH 127


>ref|XP_004137244.1| PREDICTED: ribokinase-like [Cucumis sativus]
          Length = 370

 Score =  106 bits (264), Expect = 3e-21
 Identities = 50/59 (84%), Positives = 54/59 (91%)
 Frame = +2

Query: 377 GSANADIYVEIDRLPLQGETISAKTGQTLAGGKGANQAVCSAKLNYPTFFVGQVGQDAH 553
           GSANADIYVEIDRLP +GETISAK+GQTLAGGKGANQA C  KL YPT+FVGQVG+DAH
Sbjct: 69  GSANADIYVEIDRLPEEGETISAKSGQTLAGGKGANQACCGGKLEYPTYFVGQVGKDAH 127


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