BLASTX nr result

ID: Cnidium21_contig00038830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038830
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281955.1| PREDICTED: ras-related protein RABA6b [Vitis...   136   2e-30
ref|XP_002532489.1| protein with unknown function [Ricinus commu...   129   3e-28
emb|CAA98182.1| RAB11F [Lotus japonicus]                              125   3e-27
ref|XP_004137339.1| PREDICTED: ras-related protein RABA6a-like [...   125   4e-27
emb|CAG25544.1| putative Ras-related GTP-binding protein [Cucumi...   125   4e-27

>ref|XP_002281955.1| PREDICTED: ras-related protein RABA6b [Vitis vinifera]
           gi|297734313|emb|CBI15560.3| unnamed protein product
           [Vitis vinifera]
          Length = 218

 Score =  136 bits (343), Expect = 2e-30
 Identities = 67/83 (80%), Positives = 73/83 (87%)
 Frame = -2

Query: 269 RFRAITSSYYRGALGALLVYDITRNNTFESLKKWLHELREFGNPDMVIVLVGNKSDLSES 90
           RFRAITSSYYRGALGALLVYDITR  TFE+LKKWL ELR+FG PDMVIVLVGNKSDL  S
Sbjct: 74  RFRAITSSYYRGALGALLVYDITRRATFENLKKWLRELRDFGKPDMVIVLVGNKSDLGHS 133

Query: 89  RQVVAQDGHTLAQLEGLCFMETS 21
           R+V  ++G TLA+ EGLCFMETS
Sbjct: 134 REVDEEEGKTLAETEGLCFMETS 156


>ref|XP_002532489.1| protein with unknown function [Ricinus communis]
           gi|223527788|gb|EEF29888.1| protein with unknown
           function [Ricinus communis]
          Length = 222

 Score =  129 bits (323), Expect = 3e-28
 Identities = 61/83 (73%), Positives = 72/83 (86%)
 Frame = -2

Query: 269 RFRAITSSYYRGALGALLVYDITRNNTFESLKKWLHELREFGNPDMVIVLVGNKSDLSES 90
           RFRAITSSYYRGALGALLVYDITR  TF+++KKWL ELRE+GNP+MV+VL GNK DLS +
Sbjct: 73  RFRAITSSYYRGALGALLVYDITRRATFDNVKKWLTELREYGNPEMVVVLAGNKCDLSHT 132

Query: 89  RQVVAQDGHTLAQLEGLCFMETS 21
           R+V  ++G  LA+ EGLCFMETS
Sbjct: 133 REVGEEEGKNLAETEGLCFMETS 155


>emb|CAA98182.1| RAB11F [Lotus japonicus]
          Length = 218

 Score =  125 bits (315), Expect = 3e-27
 Identities = 60/83 (72%), Positives = 70/83 (84%)
 Frame = -2

Query: 269 RFRAITSSYYRGALGALLVYDITRNNTFESLKKWLHELREFGNPDMVIVLVGNKSDLSES 90
           RFRAITSSYYRGALG +LVYDITR  TF ++ KWLHELREFGN DMV+VLV NKSDL +S
Sbjct: 74  RFRAITSSYYRGALGPMLVYDITRRPTFMNVIKWLHELREFGNEDMVVVLVANKSDLVQS 133

Query: 89  RQVVAQDGHTLAQLEGLCFMETS 21
           R+V  ++G   A++EGLCFMETS
Sbjct: 134 REVEKEEGEEFAEIEGLCFMETS 156


>ref|XP_004137339.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
           gi|449497494|ref|XP_004160418.1| PREDICTED: ras-related
           protein RABA6a-like [Cucumis sativus]
          Length = 218

 Score =  125 bits (314), Expect = 4e-27
 Identities = 62/89 (69%), Positives = 74/89 (83%)
 Frame = -2

Query: 269 RFRAITSSYYRGALGALLVYDITRNNTFESLKKWLHELREFGNPDMVIVLVGNKSDLSES 90
           RFRAITSSYYRGALGALLVYDITR  TF+++KKWL ELREFGNP+MVI+LVGNK DL +S
Sbjct: 73  RFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQS 132

Query: 89  RQVVAQDGHTLAQLEGLCFMETSL*DPMD 3
           R+V  ++   LA+LE L FMETS  D ++
Sbjct: 133 REVQEEEARHLAELENLFFMETSAKDNLN 161


>emb|CAG25544.1| putative Ras-related GTP-binding protein [Cucumis sativus]
          Length = 203

 Score =  125 bits (314), Expect = 4e-27
 Identities = 62/89 (69%), Positives = 74/89 (83%)
 Frame = -2

Query: 269 RFRAITSSYYRGALGALLVYDITRNNTFESLKKWLHELREFGNPDMVIVLVGNKSDLSES 90
           RFRAITSSYYRGALGALLVYDITR  TF+++KKWL ELREFGNP+MVI+LVGNK DL +S
Sbjct: 58  RFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQS 117

Query: 89  RQVVAQDGHTLAQLEGLCFMETSL*DPMD 3
           R+V  ++   LA+LE L FMETS  D ++
Sbjct: 118 REVQEEEARHLAELENLFFMETSAKDNLN 146


Top