BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038784
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]               149   2e-34
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             148   5e-34
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]             144   1e-32
emb|CAH67728.1| H0613A10.11 [Oryza sativa Indica Group] gi|90265...   140   8e-32
gb|ABA96941.1| retrotransposon protein, putative, unclassified [...   139   3e-31

>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score =  149 bits (376), Expect = 2e-34
 Identities = 71/133 (53%), Positives = 99/133 (74%)
 Frame = -2

Query: 400  FDGLKAYLSSPPLLATAAPSEPLTIYLSASNAAVGAVLVKEDEEGQKPIYYVSQVLKDAE 221
            F  LKA+L+SPP++      EP+ +YL+ SN AV + LV+E +  ++P+Y+VS+VL DAE
Sbjct: 1176 FQQLKAFLASPPVIQKPNAREPIVVYLAVSNEAVSSALVQEIKAEERPVYFVSRVLHDAE 1235

Query: 220  TRYPPVEKFAYALVTASRKLRHYFQGREIKVITNQPLRKLLHKPDLSGRLINWAVELSQF 41
            TRY  VEK A+ALV  +R++R YFQ  ++ V TN P+ K+L KPDL+GR+I WAVELS+F
Sbjct: 1236 TRYQMVEKVAFALVITARRMRMYFQNHKVIVRTNYPIMKILTKPDLAGRMIGWAVELSEF 1295

Query: 40   SISYEPRKAIKAQ 2
             I Y+PR AIK+Q
Sbjct: 1296 HIEYQPRGAIKSQ 1308


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  148 bits (373), Expect = 5e-34
 Identities = 73/133 (54%), Positives = 96/133 (72%)
 Frame = -2

Query: 400 FDGLKAYLSSPPLLATAAPSEPLTIYLSASNAAVGAVLVKEDEEGQKPIYYVSQVLKDAE 221
           F  LKAYL++PP+L+     E L +Y+S SN AV  VLV+ED   QKPIYYVS+ + D E
Sbjct: 296 FGQLKAYLTTPPILSKPEVDEKLYLYVSVSNHAVSGVLVREDRGEQKPIYYVSKSMTDPE 355

Query: 220 TRYPPVEKFAYALVTASRKLRHYFQGREIKVITNQPLRKLLHKPDLSGRLINWAVELSQF 41
           TRY  +EK A A+VT++RKLR YFQ   ++V+TNQPLR +LH P  SGRL  WAVELS++
Sbjct: 356 TRYTMMEKLALAVVTSARKLRPYFQSHPVQVLTNQPLRTILHSPSQSGRLAKWAVELSEY 415

Query: 40  SISYEPRKAIKAQ 2
            I ++ R ++KAQ
Sbjct: 416 DIEFKSRISMKAQ 428


>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  144 bits (362), Expect = 1e-32
 Identities = 70/133 (52%), Positives = 95/133 (71%)
 Frame = -2

Query: 400  FDGLKAYLSSPPLLATAAPSEPLTIYLSASNAAVGAVLVKEDEEGQKPIYYVSQVLKDAE 221
            F+ LK YLS+PP+L      E L +Y++ S+ AV +VLV+ED   Q+PI+Y S+ L +AE
Sbjct: 1099 FEKLKDYLSTPPILVKPEVGETLYLYIAVSDHAVSSVLVREDRGEQRPIFYTSKSLVEAE 1158

Query: 220  TRYPPVEKFAYALVTASRKLRHYFQGREIKVITNQPLRKLLHKPDLSGRLINWAVELSQF 41
            TRYP +EK A A+VT++RKLR YFQ   I V+T+QPLR  LH P  SGR+  WAVELS++
Sbjct: 1159 TRYPVIEKAALAVVTSARKLRPYFQSHTIAVLTDQPLRVALHSPSQSGRMTKWAVELSEY 1218

Query: 40   SISYEPRKAIKAQ 2
             I + PR A+K+Q
Sbjct: 1219 DIDFRPRPAMKSQ 1231


>emb|CAH67728.1| H0613A10.11 [Oryza sativa Indica Group] gi|90265218|emb|CAH67666.1|
            H0315F07.4 [Oryza sativa Indica Group]
          Length = 1215

 Score =  140 bits (354), Expect = 8e-32
 Identities = 63/133 (47%), Positives = 94/133 (70%)
 Frame = -2

Query: 400  FDGLKAYLSSPPLLATAAPSEPLTIYLSASNAAVGAVLVKEDEEGQKPIYYVSQVLKDAE 221
            F GLK YLS+PP+L    P+E L +Y++A+  +V  V++ E E+ Q+P+YYVS+ L DA+
Sbjct: 713  FVGLKRYLSNPPVLVAPQPNEELFLYIAATPYSVSTVIIVEREKVQRPVYYVSEALHDAK 772

Query: 220  TRYPPVEKFAYALVTASRKLRHYFQGREIKVITNQPLRKLLHKPDLSGRLINWAVELSQF 41
            TRYP ++K  YA++  SRKLRHYFQ   + V+++ PL +++   D+ GR+  W VELSQF
Sbjct: 773  TRYPQIQKLLYAVIMTSRKLRHYFQAHRVTVVSSFPLGEVVRNKDVVGRIAKWVVELSQF 832

Query: 40   SISYEPRKAIKAQ 2
             + + PR AIK+Q
Sbjct: 833  DVHFAPRTAIKSQ 845


>gb|ABA96941.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 496

 Score =  139 bits (349), Expect = 3e-31
 Identities = 69/133 (51%), Positives = 92/133 (69%)
 Frame = -2

Query: 400 FDGLKAYLSSPPLLATAAPSEPLTIYLSASNAAVGAVLVKEDEEGQKPIYYVSQVLKDAE 221
           FD LK YL SPP L + AP   L +YL+AS  AV A LV+E E GQKP+Y++S+ L+ A+
Sbjct: 186 FDELKQYLQSPPALISPAPGSELLLYLAASPVAVSAALVQETESGQKPVYFISKALQGAK 245

Query: 220 TRYPPVEKFAYALVTASRKLRHYFQGREIKVITNQPLRKLLHKPDLSGRLINWAVELSQF 41
           TRY  +EK AYALV ASRKL+HYFQ  ++ V +  PL ++L   +++GRL  WA ELS F
Sbjct: 246 TRYIEMEKLAYALVMASRKLKHYFQAHKVIVPSQYPLGEVLRGKEITGRLRKWAAELSPF 305

Query: 40  SISYEPRKAIKAQ 2
            + +  R AIK+Q
Sbjct: 306 DLHFVARTAIKSQ 318