BLASTX nr result

ID: Cnidium21_contig00038749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038749
         (720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592682.1| F-box/kelch-repeat protein [Medicago truncat...    62   2e-08
ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23...    62   9e-08
gb|ACU22680.1| unknown [Glycine max]                                   62   9e-08
ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|2...    59   1e-06
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    51   1e-06

>ref|XP_003592682.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355481730|gb|AES62933.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 465

 Score = 62.4 bits (150), Expect(2) = 2e-08
 Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
 Frame = -2

Query: 644 LDYPIQSRVINIISLDIKAEMYLEILQPECGEGKYNRI-LSTFGESLSLLREFNTHADLW 468
           L Y I S + +I+SLD+  E Y ++LQP   E     I L    + L +L   +  +D+W
Sbjct: 319 LAYDICSSLWHIVSLDLNKESYRKLLQPLYNERLNTSITLEVLRDCLCILSHGDKFSDIW 378

Query: 467 VLKECGAEQHWTKLFTLVHIERLAKYSHLQSICITEG*QM 348
           ++KE G E+ WTKLF++ ++E      + QS+ I+E  Q+
Sbjct: 379 IMKEYGNEESWTKLFSIPYMEGRGFLGYCQSVYISEDDQV 418



 Score = 21.9 bits (45), Expect(2) = 2e-08
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = -3

Query: 295 TYVESLVSPY 266
           TY+ESL+SP+
Sbjct: 456 TYIESLISPF 465


>ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 393

 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 30/88 (34%), Positives = 51/88 (57%)
 Frame = -2

Query: 611 IISLDIKAEMYLEILQPECGEGKYNRILSTFGESLSLLREFNTHADLWVLKECGAEQHWT 432
           I+SLD+  E Y E+LQP  G    N  L    + L +L   +T  D+W++K+ G ++ WT
Sbjct: 262 IVSLDLHKESYEEVLQPYYGVAVVNLTLGVLRDCLCVLSHADTFLDVWLMKDYGNKESWT 321

Query: 431 KLFTLVHIERLAKYSHLQSICITEG*QM 348
           KLF + ++     Y + +++CI+E  Q+
Sbjct: 322 KLFRVPYMGISDSYLYTKALCISEDDQV 349


>gb|ACU22680.1| unknown [Glycine max]
          Length = 393

 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 30/88 (34%), Positives = 51/88 (57%)
 Frame = -2

Query: 611 IISLDIKAEMYLEILQPECGEGKYNRILSTFGESLSLLREFNTHADLWVLKECGAEQHWT 432
           I+SLD+  E Y E+LQP  G    N  L    + L +L   +T  D+W++K+ G ++ WT
Sbjct: 262 IVSLDLHKESYEEVLQPYYGVAVVNLTLGVLRDCLCVLSHADTFLDVWLMKDYGNKESWT 321

Query: 431 KLFTLVHIERLAKYSHLQSICITEG*QM 348
           KLF + ++     Y + +++CI+E  Q+
Sbjct: 322 KLFRVPYMGISDSYLYTKALCISEDDQV 349


>ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|222852550|gb|EEE90097.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
 Frame = -2

Query: 614 NIISLDIKAEMYLEILQPECGEGKYNRILSTFGESLSLLREFN-THADLWVLKECGAEQH 438
           +I++ D+  EM+ E++QP+ G   Y R+L      L ++  +    AD+WVLKE G    
Sbjct: 308 SIVAFDLAQEMFEEVVQPDYGAVGYERVLGVLQGWLCVMCNYQGVRADVWVLKEFGVRDS 367

Query: 437 WTKLFTLVHIERLAKYSHLQSICITEG 357
           WTKLF++ +++    + +   +CI  G
Sbjct: 368 WTKLFSIPYLDDPLWFHYSVPLCIDVG 394


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 50.8 bits (120), Expect(2) = 1e-06
 Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
 Frame = -2

Query: 629 QSRVINII-SLDIKAEMYLEILQPECGEGKYNRILSTFGESLSLLREF-NTHADLWVLKE 456
           +S V NI+ +LD+  E Y E+LQPE  +  +   L      L  L  F     D+W++KE
Sbjct: 223 ESNVANIVVALDLGVEDYREVLQPEYKDKNFYIDLGVLRGCLCFLANFLGERVDVWMMKE 282

Query: 455 CGAEQHWTKLFTLVHIE 405
            G ++ WTKLF++   E
Sbjct: 283 YGVKESWTKLFSVAQYE 299



 Score = 27.7 bits (60), Expect(2) = 1e-06
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = -1

Query: 684 SRGMFANGSIHWVV 643
           + G+FANG++HWVV
Sbjct: 205 ANGVFANGALHWVV 218


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