BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038743
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus ...    72   4e-11
ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_003594230.1| F-box protein [Medicago truncatula] gi|35548...    70   2e-10
ref|XP_002532715.1| conserved hypothetical protein [Ricinus comm...    68   9e-10
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    67   1e-09

>ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534616|gb|EEF36313.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 414

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/78 (48%), Positives = 47/78 (60%)
 Frame = -3

Query: 287 MSDLFPPHLLCNIFSRLPVKSLLTFRCVSKPVCALIDSPHFIKTHLQKSLSSNSNRTIIT 108
           M +  PP LL  I +RLPV  LL FR +SK  CA ID P+FIKTHL+KS  +NSN T+I 
Sbjct: 1   MLEKLPPELLTEILTRLPVDCLLRFRSISKSWCAKIDDPNFIKTHLKKSRETNSNLTLIF 60

Query: 107 ASIDGSNIYYTDFDLNNT 54
           A       Y  + D  N+
Sbjct: 61  AGSHPDYFYNVNLDSLNS 78


>ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|222867152|gb|EEF04283.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/86 (41%), Positives = 52/86 (60%)
 Frame = -3

Query: 272 PPHLLCNIFSRLPVKSLLTFRCVSKPVCALIDSPHFIKTHLQKSLSSNSNRTIITASIDG 93
           P  ++ +IF +LPVKSLL FR +SKP+C+LID P FIK HL  S+++ SN ++I    D 
Sbjct: 5   PHEIITDIFQQLPVKSLLRFRSLSKPICSLIDGPDFIKFHLYHSITAKSNHSVILKEWD- 63

Query: 92  SNIYYTDFDLNNTYATFINHPFTKCG 15
             ++  DFD  +      +HP    G
Sbjct: 64  --LFTVDFDTLSDAVEVKHHPLYAAG 87


>ref|XP_003594230.1| F-box protein [Medicago truncatula] gi|355483278|gb|AES64481.1|
           F-box protein [Medicago truncatula]
          Length = 409

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 44/89 (49%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
 Frame = -3

Query: 284 SDLFPPHLLCNIFSRLPVKSLLTFRCVSKPVCALIDSPHFIKTHLQKSLSSNSNRTIITA 105
           SD  PP  L  IFSRLPVKSLL FR  SK + ++IDS +FI  H + SL    NR+ I  
Sbjct: 3   SDRLPPDTLAEIFSRLPVKSLLRFRSTSKSLKSIIDSHNFINLHRKNSL----NRSFILR 58

Query: 104 SIDGSNIYYTDFDLNN-TYATFINHPFTK 21
               SNIY  + D +N T A  +NHPFT+
Sbjct: 59  L--RSNIYQIEDDFSNLTTAVPLNHPFTR 85


>ref|XP_002532715.1| conserved hypothetical protein [Ricinus communis]
           gi|223527542|gb|EEF29664.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 395

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
 Frame = -3

Query: 272 PPHLLCNIFSRLPVKSLLTFRCVSKPVCALIDSPHFIKTHLQKSLSSNSNRTIITASIDG 93
           P  ++ ++   LPVK+LL FRC+SKP+C+LIDSP FI  HL  SL + SN  +I   +  
Sbjct: 5   PDDIVSDVLLLLPVKALLRFRCLSKPLCSLIDSPDFIDHHLSHSLKTRSNLFLI---LRD 61

Query: 92  SNIYYTDFD----LNNTYATFINHPFTKCG 15
            N+Y  DFD    ++   A  + HP  K G
Sbjct: 62  WNLYTLDFDSLSSVSPAAADVLIHPLQKGG 91


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
 Frame = -3

Query: 272 PPHLLCNIFSRLPVKSLLTFRCVSKPVCALIDSPHFIKTHLQKSLSSNSNRTIITASIDG 93
           P  ++  I  RLP K LL  R VSKP CALID P+F+K HL+ S+ ++SN  II  +   
Sbjct: 5   PLEMIAEILCRLPAKELLCCRSVSKPWCALIDGPNFVKLHLKHSMDTSSNLYIILRTT-- 62

Query: 92  SNIYYTDFDLN---NTYATF--INHP 30
           S+++Y DF+ N   N   T   +NHP
Sbjct: 63  SHVHYMDFEQNLVLNDCVTLKELNHP 88