BLASTX nr result

ID: Cnidium21_contig00038642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038642
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_564058.1| RHOMBOID-like protein 12 [Arabidopsis thaliana]...    74   9e-12
ref|XP_002890288.1| rhomboid family protein [Arabidopsis lyrata ...    72   4e-11
gb|EEC71529.1| hypothetical protein OsI_03840 [Oryza sativa Indi...    70   2e-10
ref|NP_001044332.1| Os01g0763100 [Oryza sativa Japonica Group] g...    70   2e-10
ref|XP_003525439.1| PREDICTED: uncharacterized protein C13E7.11-...    68   9e-10

>ref|NP_564058.1| RHOMBOID-like protein 12 [Arabidopsis thaliana]
           gi|9795596|gb|AAF98414.1|AC026238_6 Hypothetical protein
           [Arabidopsis thaliana]
           gi|13877607|gb|AAK43881.1|AF370504_1 Unknown protein
           [Arabidopsis thaliana] gi|20148713|gb|AAM10247.1|
           unknown protein [Arabidopsis thaliana]
           gi|21592397|gb|AAM64348.1| unknown [Arabidopsis
           thaliana] gi|332191612|gb|AEE29733.1| RHOMBOID-like
           protein 12 [Arabidopsis thaliana]
          Length = 336

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/47 (72%), Positives = 40/47 (85%)
 Frame = +1

Query: 88  FVKLAYLPSVDNFKSGRLHTLITCAFSHIDTGHVVSNMLGLYVFGTS 228
           F+   ++ S+DNFKSGRLHTLIT AFSHID GH+VSNM+GLY FGTS
Sbjct: 157 FMMNNFMISLDNFKSGRLHTLITSAFSHIDIGHIVSNMIGLYFFGTS 203


>ref|XP_002890288.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336130|gb|EFH66547.1| rhomboid family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 336

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/47 (70%), Positives = 39/47 (82%)
 Frame = +1

Query: 88  FVKLAYLPSVDNFKSGRLHTLITCAFSHIDTGHVVSNMLGLYVFGTS 228
           F+   ++ S+DNF SGRLHTLIT AFSHID GH+VSNM+GLY FGTS
Sbjct: 157 FMMKNFMISLDNFTSGRLHTLITSAFSHIDIGHIVSNMIGLYFFGTS 203


>gb|EEC71529.1| hypothetical protein OsI_03840 [Oryza sativa Indica Group]
          Length = 327

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 30/49 (61%), Positives = 42/49 (85%)
 Frame = +1

Query: 82  P*FVKLAYLPSVDNFKSGRLHTLITCAFSHIDTGHVVSNMLGLYVFGTS 228
           P F++  ++ S+DNFKSGRLHTL+T AFSH ++GH++SNM+GLY FG+S
Sbjct: 148 PSFMRRHFMISLDNFKSGRLHTLLTNAFSHAESGHLISNMIGLYFFGSS 196


>ref|NP_001044332.1| Os01g0763100 [Oryza sativa Japonica Group]
           gi|57900364|dbj|BAD87354.1| rhomboid family protein-like
           [Oryza sativa Japonica Group]
           gi|113533863|dbj|BAF06246.1| Os01g0763100 [Oryza sativa
           Japonica Group]
          Length = 308

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 30/49 (61%), Positives = 42/49 (85%)
 Frame = +1

Query: 82  P*FVKLAYLPSVDNFKSGRLHTLITCAFSHIDTGHVVSNMLGLYVFGTS 228
           P F++  ++ S+DNFKSGRLHTL+T AFSH ++GH++SNM+GLY FG+S
Sbjct: 132 PSFMRRHFMISLDNFKSGRLHTLLTNAFSHAESGHLISNMIGLYFFGSS 180


>ref|XP_003525439.1| PREDICTED: uncharacterized protein C13E7.11-like [Glycine max]
          Length = 336

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = +1

Query: 112 SVDNFKSGRLHTLITCAFSHIDTGHVVSNMLGLYVFG 222
           S+DNFKSGRLHTLIT AFSH+DT H+VSNM+GLY FG
Sbjct: 170 SLDNFKSGRLHTLITNAFSHVDTWHIVSNMIGLYFFG 206


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