BLASTX nr result
ID: Cnidium21_contig00038642
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00038642 (353 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_564058.1| RHOMBOID-like protein 12 [Arabidopsis thaliana]... 74 9e-12 ref|XP_002890288.1| rhomboid family protein [Arabidopsis lyrata ... 72 4e-11 gb|EEC71529.1| hypothetical protein OsI_03840 [Oryza sativa Indi... 70 2e-10 ref|NP_001044332.1| Os01g0763100 [Oryza sativa Japonica Group] g... 70 2e-10 ref|XP_003525439.1| PREDICTED: uncharacterized protein C13E7.11-... 68 9e-10 >ref|NP_564058.1| RHOMBOID-like protein 12 [Arabidopsis thaliana] gi|9795596|gb|AAF98414.1|AC026238_6 Hypothetical protein [Arabidopsis thaliana] gi|13877607|gb|AAK43881.1|AF370504_1 Unknown protein [Arabidopsis thaliana] gi|20148713|gb|AAM10247.1| unknown protein [Arabidopsis thaliana] gi|21592397|gb|AAM64348.1| unknown [Arabidopsis thaliana] gi|332191612|gb|AEE29733.1| RHOMBOID-like protein 12 [Arabidopsis thaliana] Length = 336 Score = 74.3 bits (181), Expect = 9e-12 Identities = 34/47 (72%), Positives = 40/47 (85%) Frame = +1 Query: 88 FVKLAYLPSVDNFKSGRLHTLITCAFSHIDTGHVVSNMLGLYVFGTS 228 F+ ++ S+DNFKSGRLHTLIT AFSHID GH+VSNM+GLY FGTS Sbjct: 157 FMMNNFMISLDNFKSGRLHTLITSAFSHIDIGHIVSNMIGLYFFGTS 203 >ref|XP_002890288.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata] gi|297336130|gb|EFH66547.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata] Length = 336 Score = 72.4 bits (176), Expect = 4e-11 Identities = 33/47 (70%), Positives = 39/47 (82%) Frame = +1 Query: 88 FVKLAYLPSVDNFKSGRLHTLITCAFSHIDTGHVVSNMLGLYVFGTS 228 F+ ++ S+DNF SGRLHTLIT AFSHID GH+VSNM+GLY FGTS Sbjct: 157 FMMKNFMISLDNFTSGRLHTLITSAFSHIDIGHIVSNMIGLYFFGTS 203 >gb|EEC71529.1| hypothetical protein OsI_03840 [Oryza sativa Indica Group] Length = 327 Score = 70.1 bits (170), Expect = 2e-10 Identities = 30/49 (61%), Positives = 42/49 (85%) Frame = +1 Query: 82 P*FVKLAYLPSVDNFKSGRLHTLITCAFSHIDTGHVVSNMLGLYVFGTS 228 P F++ ++ S+DNFKSGRLHTL+T AFSH ++GH++SNM+GLY FG+S Sbjct: 148 PSFMRRHFMISLDNFKSGRLHTLLTNAFSHAESGHLISNMIGLYFFGSS 196 >ref|NP_001044332.1| Os01g0763100 [Oryza sativa Japonica Group] gi|57900364|dbj|BAD87354.1| rhomboid family protein-like [Oryza sativa Japonica Group] gi|113533863|dbj|BAF06246.1| Os01g0763100 [Oryza sativa Japonica Group] Length = 308 Score = 70.1 bits (170), Expect = 2e-10 Identities = 30/49 (61%), Positives = 42/49 (85%) Frame = +1 Query: 82 P*FVKLAYLPSVDNFKSGRLHTLITCAFSHIDTGHVVSNMLGLYVFGTS 228 P F++ ++ S+DNFKSGRLHTL+T AFSH ++GH++SNM+GLY FG+S Sbjct: 132 PSFMRRHFMISLDNFKSGRLHTLLTNAFSHAESGHLISNMIGLYFFGSS 180 >ref|XP_003525439.1| PREDICTED: uncharacterized protein C13E7.11-like [Glycine max] Length = 336 Score = 67.8 bits (164), Expect = 9e-10 Identities = 30/37 (81%), Positives = 34/37 (91%) Frame = +1 Query: 112 SVDNFKSGRLHTLITCAFSHIDTGHVVSNMLGLYVFG 222 S+DNFKSGRLHTLIT AFSH+DT H+VSNM+GLY FG Sbjct: 170 SLDNFKSGRLHTLITNAFSHVDTWHIVSNMIGLYFFG 206