BLASTX nr result

ID: Cnidium21_contig00038621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038621
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27895.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002522601.1| conserved hypothetical protein [Ricinus comm...    95   5e-18
ref|XP_002309215.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_003569232.1| PREDICTED: zinc finger CCCH domain-containin...    83   3e-14
sp|Q657B3.1|C3H7_ORYSJ RecName: Full=Zinc finger CCCH domain-con...    80   1e-13

>emb|CBI27895.3| unnamed protein product [Vitis vinifera]
          Length = 675

 Score =  107 bits (267), Expect = 1e-21
 Identities = 66/153 (43%), Positives = 86/153 (56%), Gaps = 16/153 (10%)
 Frame = -2

Query: 451 CMKGDDCPFDHQLSKYPCNSFLSQGSCSRGSNCMFSHDVVPVKEGSSVF------EQQSS 290
           CMKGDDCPFDHQLS YPCN+++S+G CSRG +C+FSH  +P+KE S           +  
Sbjct: 271 CMKGDDCPFDHQLSNYPCNNYVSKGFCSRGDDCLFSHK-MPLKESSPTAVNVCKPVSEPP 329

Query: 289 SVKATSNLKK----PTSKQNVNAKSCSRGISLSKNEKHN------GPAEQAPKGISFLSH 140
           S+ + S  KK     TS QN N+ S S GI    N +         P EQA +GI+ LS 
Sbjct: 330 SLPSKSYSKKLDMNGTSHQNGNSLSHSVGIFPQSNMEKKVAEIVLKPPEQASRGINSLSF 389

Query: 139 VKVPLGNMSENGQGASSPKADNGAKVDQQRISG 41
            K P+    +  Q  SSP  D G +VD+Q+  G
Sbjct: 390 GKSPMDYSGKLKQIGSSPTMDEGVEVDKQKNQG 422


>ref|XP_002522601.1| conserved hypothetical protein [Ricinus communis]
           gi|223538077|gb|EEF39688.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 932

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 61/151 (40%), Positives = 80/151 (52%), Gaps = 17/151 (11%)
 Frame = -2

Query: 451 CMKGDDCPFDHQLSKYPCNSFLSQGSCSRGSNCMFSHDVVPVKE----GSSVF--EQQSS 290
           C+KGDDCPFDH+LSKYPC ++ S GSCSRG +CMFSH  +P+KE     S+V   +  S 
Sbjct: 529 CLKGDDCPFDHELSKYPCTNYASTGSCSRGDDCMFSHK-LPLKEDLPSASNVCTPDLNSP 587

Query: 289 SVKATSNLKKPTSKQNVN------AKSCSRGISLSKNEKH-----NGPAEQAPKGISFLS 143
           S+   SN KK      ++      +     G+S    E++      GP    PKGISFLS
Sbjct: 588 SLPHASNSKKQLDSGGISHHTAKASPDTGGGLSRKDTERNVPKGVLGPHVLVPKGISFLS 647

Query: 142 HVKVPLGNMSENGQGASSPKADNGAKVDQQR 50
             K  +   S +   +SS     G KV  QR
Sbjct: 648 AGKSSVVESSHSTPRSSSLSRSEGFKVGNQR 678


>ref|XP_002309215.1| predicted protein [Populus trichocarpa] gi|222855191|gb|EEE92738.1|
            predicted protein [Populus trichocarpa]
          Length = 928

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 65/167 (38%), Positives = 89/167 (53%), Gaps = 20/167 (11%)
 Frame = -2

Query: 451  CMKGDDCPFDHQLSKYPCNSFLSQGSCSRGSNCMFSH--DVVPVKEGSSVF--EQQSSSV 284
            CMKGD+CP+DHQLSKYPC +++S+G C RG +CMFSH  D+      S+V   + +  S+
Sbjct: 525  CMKGDNCPYDHQLSKYPCTNYVSKGYCIRGDSCMFSHKEDLASTSNVSNVCTPKVKPPSL 584

Query: 283  KATSNLKKP-----TSKQNVNAKSCSRGISLSKNEK---------HNGPAEQAPKGISFL 146
             +TSN K+      TS Q   A   S G+ +S + +          N PA   PKG+SFL
Sbjct: 585  PSTSNSKRQLDISGTSNQTAKALPDSTGV-ISDDRRAALNVAKTVQNLPA-LVPKGLSFL 642

Query: 145  SHVKVPLGNMSENGQGASSP--KADNGAKVDQQRISGPSDLVVSLNK 11
            S  K    +M E+    SSP  K++   KV  Q     S  V S N+
Sbjct: 643  SGGK---KSMVESSPKTSSPSLKSNVFVKVGNQIDQCASVTVQSCNE 686


>ref|XP_003569232.1| PREDICTED: zinc finger CCCH domain-containing protein 7-like
           [Brachypodium distachyon]
          Length = 685

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 51/123 (41%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
 Frame = -2

Query: 451 CMKGDDCPFDHQLSKYPCNSFLSQGSCSRGSNCMFSHDVVPVKEGSSVFEQQSSSVKATS 272
           C+KGDDCP+DH+LSKYPC++FL  G C RG  C FSH V P  + SS  + + S     S
Sbjct: 470 CLKGDDCPYDHELSKYPCHNFLGNGMCLRGDKCKFSH-VAPTADDSSTKDAKKSDASLVS 528

Query: 271 NLKKPTSKQNVNAKSCSRGISLSKNEKHNG-PAEQAP-KGISFLSHVKVPLGNMSENGQG 98
             +K TSK+  +++  S          H+G P   AP K  S L      LG++S+N Q 
Sbjct: 529 --EKLTSKEQNSSQKIS--------TVHDGEPVASAPTKHYSILK----TLGSISKNAQK 574

Query: 97  ASS 89
           AS+
Sbjct: 575 ASA 577


>sp|Q657B3.1|C3H7_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 7;
           Short=OsC3H7 gi|52076312|dbj|BAD45097.1| zinc finger
           (CCCH-type) protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
 Frame = -2

Query: 451 CMKGDDCPFDHQLSKYPCNSFLSQGSCSRGSNCMFSHDVVPVKEGSS---VFEQQSSSVK 281
           C+KGDDCP+DH+LSKYPC++F+  G C RG  C FSH V+P  EG S     +  +SSV 
Sbjct: 472 CLKGDDCPYDHELSKYPCHNFMENGMCIRGDKCKFSH-VIPTAEGPSTPDAKKSNASSVP 530

Query: 280 ATSNLKKPTSKQNVN 236
             +N ++ TS+Q  +
Sbjct: 531 EKANCQEQTSRQKTS 545


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