BLASTX nr result

ID: Cnidium21_contig00038603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038603
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271734.1| PREDICTED: LEC14B homolog [Vitis vinifera]         86   3e-15
ref|XP_002524772.1| LEC14B protein, putative [Ricinus communis] ...    82   5e-14
ref|XP_002872801.1| transducin family protein [Arabidopsis lyrat...    75   7e-12
sp|Q40153.1|LE14B_LITER RecName: Full=LEC14B protein gi|1181604|...    74   1e-11
ref|NP_192211.2| transducin/WD40 domain-containing protein [Arab...    72   4e-11

>ref|XP_002271734.1| PREDICTED: LEC14B homolog [Vitis vinifera]
          Length = 486

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/79 (53%), Positives = 56/79 (70%)
 Frame = -3

Query: 239 ATDNMGYALSRMEIDSEYYNSDTSDSGVDENSSPNKRVHNLDHEIAQLTKLGSAPHEKWS 60
           A + MGYA+SR+E+DS++ ++     G D     NK +++LDHEI+QLTKL S PHE  S
Sbjct: 9   AANEMGYAMSRLELDSDFCDAGKDIHGNDNTERLNKELNHLDHEISQLTKLRSGPHECLS 68

Query: 59  HIFPGKREFSVNTVKMLAG 3
            I PGKR+  V+TVKMLAG
Sbjct: 69  QIIPGKRDSPVSTVKMLAG 87


>ref|XP_002524772.1| LEC14B protein, putative [Ricinus communis]
           gi|223535956|gb|EEF37615.1| LEC14B protein, putative
           [Ricinus communis]
          Length = 437

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 38/75 (50%), Positives = 52/75 (69%)
 Frame = -3

Query: 227 MGYALSRMEIDSEYYNSDTSDSGVDENSSPNKRVHNLDHEIAQLTKLGSAPHEKWSHIFP 48
           MGYA+SR+EIDSE  +   +++ +      NK +HNLDHEI+  T L S PH++ + + P
Sbjct: 1   MGYAMSRLEIDSENCDGGKTNNEIGNGQRSNKSLHNLDHEISLATNLKSRPHQRLAEVIP 60

Query: 47  GKREFSVNTVKMLAG 3
           GKRE  V+TVKMLAG
Sbjct: 61  GKRELPVSTVKMLAG 75


>ref|XP_002872801.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318638|gb|EFH49060.1| transducin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 493

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/81 (44%), Positives = 58/81 (71%), Gaps = 3/81 (3%)
 Frame = -3

Query: 236 TDNMGYALSRMEIDSEYYNSDTSDSGVDENSSPNK---RVHNLDHEIAQLTKLGSAPHEK 66
           TD MGYA+SR+EI+S+  ++     GV  +S+ ++    + +LDHEI+Q+TKL S+PH++
Sbjct: 10  TDEMGYAMSRLEIESDLCDTGKDFCGVGSSSASHRSSEHLADLDHEISQVTKLKSSPHQR 69

Query: 65  WSHIFPGKREFSVNTVKMLAG 3
           +S   PG+ +  V+TV+MLAG
Sbjct: 70  YSREVPGRHQLPVSTVRMLAG 90


>sp|Q40153.1|LE14B_LITER RecName: Full=LEC14B protein gi|1181604|dbj|BAA11768.1| LEC14B
           protein [Lithospermum erythrorhizon]
          Length = 473

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 41/75 (54%), Positives = 48/75 (64%)
 Frame = -3

Query: 227 MGYALSRMEIDSEYYNSDTSDSGVDENSSPNKRVHNLDHEIAQLTKLGSAPHEKWSHIFP 48
           MGYA+SR E D     S +SDS    +S  NK V NLDHEIAQLT+L SAPHE  S    
Sbjct: 1   MGYAMSRFETDVSVIFSSSSDSETSHDSLINKPVKNLDHEIAQLTRLRSAPHENLSRDLL 60

Query: 47  GKREFSVNTVKMLAG 3
            KR   ++T+KMLAG
Sbjct: 61  VKRVLPLSTMKMLAG 75


>ref|NP_192211.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|334186335|ref|NP_001190666.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
           gi|20466538|gb|AAM20586.1| putative WD-repeat protein
           [Arabidopsis thaliana] gi|23198298|gb|AAN15676.1|
           putative WD-repeat protein [Arabidopsis thaliana]
           gi|332656861|gb|AEE82261.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
           gi|332656862|gb|AEE82262.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 493

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/80 (43%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
 Frame = -3

Query: 233 DNMGYALSRMEIDSEYYNSDTSDSGVDENSSPNK---RVHNLDHEIAQLTKLGSAPHEKW 63
           D MGYA+SR+EI+S+  ++     GV  +S  ++    + +LDHEI+Q+TKL S+PH+++
Sbjct: 11  DEMGYAMSRLEIESDLCDTGKDVCGVGSSSGSHRSSEHLADLDHEISQVTKLKSSPHQRY 70

Query: 62  SHIFPGKREFSVNTVKMLAG 3
           S   PG+ +  V+TV+MLAG
Sbjct: 71  SREVPGRHQLPVSTVRMLAG 90


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