BLASTX nr result

ID: Cnidium21_contig00038591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038591
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...    72   5e-11
ref|XP_002525835.1| conserved hypothetical protein [Ricinus comm...    68   9e-10
emb|CBI40164.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_004140831.1| PREDICTED: F-box/kelch-repeat protein At3g06...    65   7e-09
ref|XP_002331674.1| f-box family protein [Populus trichocarpa] g...    64   2e-08

>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
           gi|223533120|gb|EEF34878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
 Frame = +2

Query: 89  DDLPQETAANIFSRLPVKDLIRSTSVNKKWYSLITNPTFISAQIKHAISQCNNNAVFIIP 268
           D +P+E    IF RLPVK L+R   + K WYSLI+N  FIS   ++ I   NNN + +  
Sbjct: 3   DHIPKEVLIKIFLRLPVKQLLRCRCICKTWYSLISNHNFISTHSRYTIDSNNNNYLILRH 62

Query: 269 PCPSQQKHCPLISVETSKVLEKH---EVPFTTRSDTLKLVASVDGLMLLTDSDMFYYSRD 439
              S +K    +  +   +  ++   + P  +  D  ++V S +G++ LTD+      R 
Sbjct: 63  YSRSNKKERFALHFDDDDMFSEYQELDFPLESSWDYFEIVGSCNGIICLTDNHSHILKR- 121

Query: 440 LYLWNP 457
           + LWNP
Sbjct: 122 IVLWNP 127


>ref|XP_002525835.1| conserved hypothetical protein [Ricinus communis]
           gi|223534840|gb|EEF36529.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 371

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 46/134 (34%), Positives = 74/134 (55%), Gaps = 11/134 (8%)
 Frame = +2

Query: 89  DDLPQETAANIFSRLPVKDLIRSTSVNKKWYSLITNPTFISAQIKHAISQCNNNAVFI-- 262
           +++PQE    I  RLPVK L++   V + W+SLITN +FIS  I H+I +CNN       
Sbjct: 3   ENIPQEILIEILKRLPVKSLLKYRCVCQSWHSLITNSSFISTHINHSI-ECNNRVHSYAL 61

Query: 263 -----IPPCPSQQKHCPLISVETS----KVLEKHEVPFTTRSDTLKLVASVDGLMLLTDS 415
                +P C  +++    I  ++     +V ++ + PF      L++++S +GL+ L+DS
Sbjct: 62  VKQKSVPDC--KERFILYIDDDSGDEPFRVYQELDFPFKGER-YLEIISSCNGLVCLSDS 118

Query: 416 DMFYYSRDLYLWNP 457
               Y+R  YLWNP
Sbjct: 119 Q---YAR-FYLWNP 128


>emb|CBI40164.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 2/120 (1%)
 Frame = +2

Query: 104 ETAANIFSRLPVKDLIRSTSVNKKWYSLITNPTFISAQIKHAISQCNNNAVFIIPPCPSQ 283
           E   +I  RLPVK ++R   V K W +L  +P FIS  ++ A +  N   +F       Q
Sbjct: 23  ENLIDIHLRLPVKSIVRFRCVCKSWCTLFDDPDFISMHLRQASANSNGRLLFKHLSSSEQ 82

Query: 284 QKHCPLISVETSKVLEKHEVPFTTRSDTLKLVASVDGLMLLTDSDM--FYYSRDLYLWNP 457
           + +    ++  ++V  + EVP  +++D  ++V S +GL+ LT+S+    Y S +L+LWNP
Sbjct: 83  EIYSLRSNIAFAEV-RRLEVPVPSKTDYYQIVGSSNGLICLTESNFKGSYLSLNLFLWNP 141


>ref|XP_004140831.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Cucumis
           sativus] gi|449485606|ref|XP_004157222.1| PREDICTED:
           F-box/kelch-repeat protein At3g06240-like [Cucumis
           sativus]
          Length = 372

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
 Frame = +2

Query: 86  FDDLPQETAANIFSRLPVKDLIRSTSVNKKWYSLITNPTFISAQIKHAISQCNNNAVFII 265
           F + P E    I S LPVK L+R   V K+W  L+ NP F++A ++  I     N++ II
Sbjct: 11  FVNCPTEILIEILSYLPVKSLLRFRCVCKEWNKLVQNPLFVNAHLEKRIP----NSLLII 66

Query: 266 PPCPSQQKHC-PLISVETSKVLEKHEVPFTTR-SDTLKLVASVDGLMLLTDSDMFYYSRD 439
              P+ QK C  L++ ET     + E+P        L +  S +GL+ ++ + +      
Sbjct: 67  NSSPTDQKACFSLVNAETFNETFRSEIPMKANLGYKLSVCGSYNGLVCISSASLLDVD-P 125

Query: 440 LYLWNP 457
           +Y+WNP
Sbjct: 126 IYIWNP 131


>ref|XP_002331674.1| f-box family protein [Populus trichocarpa]
           gi|222874093|gb|EEF11224.1| f-box family protein
           [Populus trichocarpa]
          Length = 441

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
 Frame = +2

Query: 59  VSTNMATTSFDDLPQETAANIFSRLPVKDLIRSTSVNKKWYSLITNPTFISAQIKHAISQ 238
           +S  MAT +   LP++    I SRLPVK+L++   V K WY++IT+P FIS  +++  S+
Sbjct: 30  MSVVMATMTGHPLPEDVVIEILSRLPVKNLLQFKCVCKSWYAIITSPNFISKHLRNYYSK 89

Query: 239 CNNNAVFIIPPCPSQQ---KHCPLISVETSKVL---EKHEVPFTTRSDTLKLVASVDGLM 400
            +++   ++  C +Q    +   L+  ET KVL       +PF +      L    DG+ 
Sbjct: 90  SDDSDCLLVQYCVTQAGELESLELLLDETPKVLSYASLGNMPFHSPF----LCGPCDGI- 144

Query: 401 LLTDSDMFYYSRDLY----LWNP 457
                  FY  RD Y     WNP
Sbjct: 145 -------FYMYRDYYDFRAFWNP 160


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