BLASTX nr result

ID: Cnidium21_contig00038588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038588
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|2FON|A Chain A, X-Ray Crystal Structure Of Leacx1, An Acyl-C...    62   4e-08
ref|NP_001234658.1| peroxisomal acyl-CoA oxidase 1B [Solanum lyc...    61   1e-07
gb|AAW78691.1| peroxisomal acyl-CoA oxidase 1A [Solanum cheesman...    60   1e-07
ref|NP_001234198.1| peroxisomal acyl-CoA oxidase 1A [Solanum lyc...    60   1e-07
pdb|1W07|A Chain A, Arabidopsis Thaliana Acyl-Coa Oxidase 1 gi|5...    59   3e-07

>pdb|2FON|A Chain A, X-Ray Crystal Structure Of Leacx1, An Acyl-Coa Oxidase
           From Lycopersicon Esculentum (Tomato)
           gi|109157677|pdb|2FON|B Chain B, X-Ray Crystal Structure
           Of Leacx1, An Acyl-Coa Oxidase From Lycopersicon
           Esculentum (Tomato) gi|109157678|pdb|2FON|C Chain C,
           X-Ray Crystal Structure Of Leacx1, An Acyl-Coa Oxidase
           From Lycopersicon Esculentum (Tomato)
          Length = 683

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/37 (75%), Positives = 31/37 (83%)
 Frame = -2

Query: 112 EMEGIDYLADERRKAEFDVDAMKIVWAGSKQAFHLVD 2
           EMEG+DYLADER+KA FDVD MKIVWAGS+  F L D
Sbjct: 19  EMEGVDYLADERKKAGFDVDEMKIVWAGSRHDFELTD 55


>ref|NP_001234658.1| peroxisomal acyl-CoA oxidase 1B [Solanum lycopersicum]
           gi|58531950|gb|AAW78690.1| peroxisomal acyl-CoA oxidase
           1B [Solanum lycopersicum]
          Length = 649

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/36 (75%), Positives = 33/36 (91%)
 Frame = -2

Query: 109 MEGIDYLADERRKAEFDVDAMKIVWAGSKQAFHLVD 2
           MEGIDYLA+ER+KAEF+VD MKIVWAGS++AF + D
Sbjct: 1   MEGIDYLAEERKKAEFNVDEMKIVWAGSRRAFEVSD 36


>gb|AAW78691.1| peroxisomal acyl-CoA oxidase 1A [Solanum cheesmaniae]
          Length = 664

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = -2

Query: 109 MEGIDYLADERRKAEFDVDAMKIVWAGSKQAFHLVD 2
           MEG+DYLADER+KA FDVD MKIVWAGS+  F L D
Sbjct: 1   MEGVDYLADERKKAGFDVDEMKIVWAGSRHDFELTD 36


>ref|NP_001234198.1| peroxisomal acyl-CoA oxidase 1A [Solanum lycopersicum]
           gi|58531948|gb|AAW78689.1| peroxisomal acyl-CoA oxidase
           1A [Solanum lycopersicum]
          Length = 664

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = -2

Query: 109 MEGIDYLADERRKAEFDVDAMKIVWAGSKQAFHLVD 2
           MEG+DYLADER+KA FDVD MKIVWAGS+  F L D
Sbjct: 1   MEGVDYLADERKKAGFDVDEMKIVWAGSRHDFELTD 36


>pdb|1W07|A Chain A, Arabidopsis Thaliana Acyl-Coa Oxidase 1
           gi|58177067|pdb|1W07|B Chain B, Arabidopsis Thaliana
           Acyl-Coa Oxidase 1
          Length = 659

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = -2

Query: 109 MEGIDYLADERRKAEFDVDAMKIVWAGSKQAFHLVD 2
           MEGID+LADER KAEFDV+ MKIVWAGS+ AF + D
Sbjct: 1   MEGIDHLADERNKAEFDVEDMKIVWAGSRHAFEVSD 36


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