BLASTX nr result

ID: Cnidium21_contig00038587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038587
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518526.1| Tumor suppressor candidate, putative [Ricinu...    72   4e-11
ref|XP_002317210.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_004134751.1| PREDICTED: polyubiquitin-like isoform 3 [Cuc...    64   2e-09
gb|ABB97041.1| unknown [Brassica rapa]                                 67   2e-09
ref|NP_176372.1| OST3 and OST6 domain-containing protein [Arabid...    65   4e-09

>ref|XP_002518526.1| Tumor suppressor candidate, putative [Ricinus communis]
           gi|223542371|gb|EEF43913.1| Tumor suppressor candidate,
           putative [Ricinus communis]
          Length = 349

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 30/47 (63%), Positives = 40/47 (85%)
 Frame = +1

Query: 190 PIMMKRLVLENTLLYDWTVWLSGALFLYFFSVSGTMFSLIRKMPMFM 330
           P M+K+L+   TLL+DW +WLSGA+F+YFFSVSG M ++IRKMPMF+
Sbjct: 210 PFMIKKLLTGQTLLHDWRIWLSGAVFVYFFSVSGAMHNIIRKMPMFL 256


>ref|XP_002317210.1| predicted protein [Populus trichocarpa] gi|222860275|gb|EEE97822.1|
           predicted protein [Populus trichocarpa]
          Length = 312

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 28/44 (63%), Positives = 39/44 (88%)
 Frame = +1

Query: 199 MKRLVLENTLLYDWTVWLSGALFLYFFSVSGTMFSLIRKMPMFM 330
           +K+L+ ++T L+DW VWL GA+F+YFFSVSG MF++IRKMPMF+
Sbjct: 177 IKKLLTKDTFLHDWKVWLLGAVFVYFFSVSGAMFNIIRKMPMFL 220


>ref|XP_004134751.1| PREDICTED: polyubiquitin-like isoform 3 [Cucumis sativus]
          Length = 344

 Score = 63.9 bits (154), Expect(2) = 2e-09
 Identities = 27/47 (57%), Positives = 38/47 (80%)
 Frame = +1

Query: 190 PIMMKRLVLENTLLYDWTVWLSGALFLYFFSVSGTMFSLIRKMPMFM 330
           P  +K+++   TLL D  VWL+GA+F+YFFSV+GTM ++IRKMPMF+
Sbjct: 205 PFALKKVIAGETLLNDRKVWLTGAIFIYFFSVAGTMHNIIRKMPMFL 251



 Score = 23.1 bits (48), Expect(2) = 2e-09
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 84  EFVE*NTEVIVGTIFRPRIVLK 149
           EFVE  T ++VG I RP +  K
Sbjct: 169 EFVESKTSLVVGPIQRPPMFSK 190


>gb|ABB97041.1| unknown [Brassica rapa]
          Length = 346

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 28/47 (59%), Positives = 40/47 (85%)
 Frame = +1

Query: 190 PIMMKRLVLENTLLYDWTVWLSGALFLYFFSVSGTMFSLIRKMPMFM 330
           P ++KR++   TLL+D  +WLSGA+F+YFFSV+GTM ++IRKMPMF+
Sbjct: 207 PFVIKRILRGETLLHDHRLWLSGAIFIYFFSVAGTMHNIIRKMPMFL 253


>ref|NP_176372.1| OST3 and OST6 domain-containing protein [Arabidopsis thaliana]
           gi|75213403|sp|Q9SYB5.1|OST3B_ARATH RecName:
           Full=Probable dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase subunit 3B; Flags: Precursor
           gi|4508079|gb|AAD21423.1| Hypothetical protein
           [Arabidopsis thaliana] gi|332195765|gb|AEE33886.1| OST3
           and OST6 domain-containing protein [Arabidopsis
           thaliana]
          Length = 346

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 27/47 (57%), Positives = 40/47 (85%)
 Frame = +1

Query: 190 PIMMKRLVLENTLLYDWTVWLSGALFLYFFSVSGTMFSLIRKMPMFM 330
           P ++KR++   T+L+D  +WLSGA+F+YFFSV+GTM ++IRKMPMF+
Sbjct: 207 PFIIKRVLKGETILHDTRLWLSGAIFIYFFSVAGTMHNIIRKMPMFL 253


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