BLASTX nr result

ID: Cnidium21_contig00038577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038577
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285023.2| PREDICTED: uncharacterized protein LOC100267...   112   3e-23
ref|XP_003550833.1| PREDICTED: uncharacterized protein LOC100795...   106   2e-21
ref|XP_003525657.1| PREDICTED: uncharacterized protein LOC100809...   104   9e-21
ref|XP_002324847.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_002524440.1| RNA binding protein, putative [Ricinus commu...   101   7e-20

>ref|XP_002285023.2| PREDICTED: uncharacterized protein LOC100267997 [Vitis vinifera]
          Length = 415

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/81 (67%), Positives = 65/81 (80%)
 Frame = +3

Query: 3   SSCWLGCKEKISLPPTKEELTEKIHSLELHAYRSTIGAFHAAGPLSWEQETLVTDLRISL 182
           S C LG +E   L PTKEEL  +IH LELHAYR TI A HA+GPLSWEQETLVT+LR+SL
Sbjct: 332 SFCRLGYEEGNCLLPTKEELAAEIHRLELHAYRCTIEALHASGPLSWEQETLVTNLRLSL 391

Query: 183 HISNDEHLLEIKNLMSTTTSV 245
           HISNDEHL+E++NL+S   S+
Sbjct: 392 HISNDEHLMELRNLVSADISI 412


>ref|XP_003550833.1| PREDICTED: uncharacterized protein LOC100795963 [Glycine max]
          Length = 404

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/84 (60%), Positives = 64/84 (76%)
 Frame = +3

Query: 3   SSCWLGCKEKISLPPTKEELTEKIHSLELHAYRSTIGAFHAAGPLSWEQETLVTDLRISL 182
           S C    +E    PPT+EEL  +IH LELHAYR TI A HA+GPLSWEQE L+T+LR+SL
Sbjct: 321 SVCQRSDEEGDCSPPTQEELAAEIHRLELHAYRCTIEALHASGPLSWEQEALMTNLRLSL 380

Query: 183 HISNDEHLLEIKNLMSTTTSVSCR 254
           HISNDEHL+E++NL+S+  S+  R
Sbjct: 381 HISNDEHLMELRNLISSENSIPLR 404


>ref|XP_003525657.1| PREDICTED: uncharacterized protein LOC100809539 [Glycine max]
          Length = 397

 Score =  104 bits (259), Expect = 9e-21
 Identities = 50/84 (59%), Positives = 63/84 (75%)
 Frame = +3

Query: 3   SSCWLGCKEKISLPPTKEELTEKIHSLELHAYRSTIGAFHAAGPLSWEQETLVTDLRISL 182
           S C    +E    PPT+EEL  +IH LELHAY  TI A HA+GPLSWEQE L+T+LR+SL
Sbjct: 314 SVCQRSDEEGNCSPPTQEELAAEIHRLELHAYHCTIEALHASGPLSWEQEALMTNLRLSL 373

Query: 183 HISNDEHLLEIKNLMSTTTSVSCR 254
           HISNDEHL+E++NL+S+  S+  R
Sbjct: 374 HISNDEHLMELRNLISSENSIPFR 397


>ref|XP_002324847.1| predicted protein [Populus trichocarpa] gi|222866281|gb|EEF03412.1|
           predicted protein [Populus trichocarpa]
          Length = 398

 Score =  102 bits (253), Expect = 4e-20
 Identities = 48/76 (63%), Positives = 63/76 (82%)
 Frame = +3

Query: 18  GCKEKISLPPTKEELTEKIHSLELHAYRSTIGAFHAAGPLSWEQETLVTDLRISLHISND 197
           G KE+    P  E++T +IHSLELHAYR T+G F+A+GPLSWEQE L+T+LRISL+ISND
Sbjct: 320 GDKEENCSLPLGEDVTVRIHSLELHAYRCTLGVFYASGPLSWEQEALLTNLRISLNISND 379

Query: 198 EHLLEIKNLMSTTTSV 245
           EHL+E++NL+S  TS+
Sbjct: 380 EHLMELRNLISAGTSI 395


>ref|XP_002524440.1| RNA binding protein, putative [Ricinus communis]
           gi|223536228|gb|EEF37880.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 383

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/84 (55%), Positives = 62/84 (73%)
 Frame = +3

Query: 3   SSCWLGCKEKISLPPTKEELTEKIHSLELHAYRSTIGAFHAAGPLSWEQETLVTDLRISL 182
           S C  G +E  +  PT EEL  ++H LELHAYR T+ A +A+GP SWEQE +VT+LR+SL
Sbjct: 300 SFCHRGYEEGTNCFPTNEELAAEVHRLELHAYRCTMEALYASGPFSWEQEEMVTNLRLSL 359

Query: 183 HISNDEHLLEIKNLMSTTTSVSCR 254
           HISNDEHL+E++NL+S   S+  R
Sbjct: 360 HISNDEHLMEVRNLVSADNSIPSR 383


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