BLASTX nr result

ID: Cnidium21_contig00038539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038539
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25117.3| unnamed protein product [Vitis vinifera]               45   2e-06
ref|XP_002271290.1| PREDICTED: agamous-like MADS-box protein AGL...    45   2e-06
ref|XP_002270922.1| PREDICTED: agamous-like MADS-box protein AGL...    46   3e-06

>emb|CBI25117.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score = 44.7 bits (104), Expect(2) = 2e-06
 Identities = 20/29 (68%), Positives = 25/29 (86%)
 Frame = +1

Query: 4   ETAIVVFSPGKNKVYSFGHPNVKHVIDKF 90
           E AI+VFSPGK K+YSFGHP V+ +ID+F
Sbjct: 49  EIAIIVFSPGK-KMYSFGHPGVESIIDRF 76



 Score = 33.1 bits (74), Expect(2) = 2e-06
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
 Frame = +3

Query: 171 DQFTGQNPIPTTDSGVLQPSERHLAQLTH-----LTELDDQLETLMAYGEGIAAERKQRL 335
           D+F   NP+P   SG LQ  E H +         LT++ +QLE     GE +   +K   
Sbjct: 74  DRFLTGNPLP--HSGALQLFEAHRSANVRDLNMQLTQVLNQLEGEKKRGEALTQMKKASQ 131

Query: 336 AMDWFRAPV 362
           A  W+ AP+
Sbjct: 132 AQYWWAAPI 140


>ref|XP_002271290.1| PREDICTED: agamous-like MADS-box protein AGL62-like [Vitis
           vinifera]
          Length = 212

 Score = 44.7 bits (104), Expect(2) = 2e-06
 Identities = 20/29 (68%), Positives = 25/29 (86%)
 Frame = +1

Query: 4   ETAIVVFSPGKNKVYSFGHPNVKHVIDKF 90
           E AI+VFSPGK K+YSFGHP V+ +ID+F
Sbjct: 49  EIAIIVFSPGK-KMYSFGHPGVESIIDRF 76



 Score = 33.1 bits (74), Expect(2) = 2e-06
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
 Frame = +3

Query: 171 DQFTGQNPIPTTDSGVLQPSERHLAQLTH-----LTELDDQLETLMAYGEGIAAERKQRL 335
           D+F   NP+P   SG LQ  E H +         LT++ +QLE     GE +   +K   
Sbjct: 74  DRFLTGNPLP--HSGALQLFEAHRSANVRDLNMQLTQVLNQLEGEKKRGEALTQMKKASQ 131

Query: 336 AMDWFRAPV 362
           A  W+ AP+
Sbjct: 132 AQYWWAAPI 140


>ref|XP_002270922.1| PREDICTED: agamous-like MADS-box protein AGL62 [Vitis vinifera]
           gi|297736388|emb|CBI25111.3| unnamed protein product
           [Vitis vinifera]
          Length = 214

 Score = 45.8 bits (107), Expect(2) = 3e-06
 Identities = 21/29 (72%), Positives = 26/29 (89%)
 Frame = +1

Query: 4   ETAIVVFSPGKNKVYSFGHPNVKHVIDKF 90
           ETAI+VFSPGK K+YSFGHP V+ +ID+F
Sbjct: 49  ETAIIVFSPGK-KLYSFGHPCVESIIDRF 76



 Score = 30.8 bits (68), Expect(2) = 3e-06
 Identities = 33/117 (28%), Positives = 46/117 (39%), Gaps = 8/117 (6%)
 Frame = +3

Query: 171 DQFTGQNPIPTTDSGVLQPSERHLAQLTH-----LTELDDQLETLMAYGEGIAAERKQRL 335
           D+F  +NP+P  +SG LQ  E H           LT++ +QLE     GE +    K   
Sbjct: 74  DRFLMRNPLP--NSGALQLFEAHRTTNVRNLNVQLTQVVNQLEGEKKRGEALTQMWKACK 131

Query: 336 AMDWFRAPVXXXXXXXXXXXXSQFMGLMSSVVDRTKNLAVMPQAQN---FTTSNSVG 497
              W+ AP+                 L   V  +   L  M +A+N   F   NSVG
Sbjct: 132 PQCWWAAPIEEFSLEQLELLKVSLEDLRRKVARQADEL--MIEAKNPPAFFPGNSVG 186


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