BLASTX nr result

ID: Cnidium21_contig00038519 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038519
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   130   9e-29
ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   130   9e-29
ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   130   9e-29
ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   130   9e-29
gb|AAV44035.1| putative helicase [Oryza sativa Japonica Group]        129   3e-28

>ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355513988|gb|AES95611.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1427

 Score =  130 bits (328), Expect = 9e-29
 Identities = 62/141 (43%), Positives = 92/141 (65%)
 Frame = +2

Query: 14   WNLRKRGKQIGRLAYTHHSSGELWYLRLLLTKVRGATSYDFLRTIDGKLWSTFHETCKEY 193
            W  RK G+ IGR+ Y H +SGE +YLR+LL  V G TSY+ ++T+ G  + TF ETC   
Sbjct: 742  WKKRKAGRTIGRIYYAHPTSGERYYLRILLNIVHGPTSYEEIKTVGGVTYQTFKETCNAL 801

Query: 194  GLLDDDNEWNEVLKQCSACGFPQQIRQLFVHIMVNCKVSDLKTLWNSHWKQIVDDILMNQ 373
            GLL+D+ EWN+ L + S      Q+R+LFV I++  +V+D+  LW ++WK + DDI+  +
Sbjct: 802  GLLNDNKEWNDALNEASQWATGTQLRELFVTILLYGEVADIGKLWETNWKTLSDDIVYKK 861

Query: 374  RKLTGNPQLILNEKQQQFYAL 436
            R L  + +L LN++Q Q Y L
Sbjct: 862  RILFQHSRLELNDEQIQSYCL 882


>ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355510179|gb|AES91321.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1558

 Score =  130 bits (328), Expect = 9e-29
 Identities = 62/141 (43%), Positives = 92/141 (65%)
 Frame = +2

Query: 14   WNLRKRGKQIGRLAYTHHSSGELWYLRLLLTKVRGATSYDFLRTIDGKLWSTFHETCKEY 193
            W  RK G+ IGR+ Y H +SGE +YLR+LL  V G TSY+ ++T+ G  + TF ETC   
Sbjct: 742  WKKRKAGRTIGRIYYAHPTSGEKYYLRILLNIVHGPTSYEEIKTVGGVTYQTFKETCNAL 801

Query: 194  GLLDDDNEWNEVLKQCSACGFPQQIRQLFVHIMVNCKVSDLKTLWNSHWKQIVDDILMNQ 373
            GLL+D+ EWN+ L + S      Q+R+LFV I++  +V+D+  LW ++WK + DDI+  +
Sbjct: 802  GLLNDNREWNDALNEASQWATGTQLRELFVTILLYGEVADIGKLWETNWKTLSDDIVYKK 861

Query: 374  RKLTGNPQLILNEKQQQFYAL 436
            R L  + +L LN++Q Q Y L
Sbjct: 862  RILFQHSRLELNDEQIQSYCL 882


>ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355510129|gb|AES91271.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1531

 Score =  130 bits (328), Expect = 9e-29
 Identities = 62/141 (43%), Positives = 92/141 (65%)
 Frame = +2

Query: 14   WNLRKRGKQIGRLAYTHHSSGELWYLRLLLTKVRGATSYDFLRTIDGKLWSTFHETCKEY 193
            W  RK G+ IGR+ Y H +SGE +YLR+LL  V G TSY+ ++T+ G  + TF ETC   
Sbjct: 715  WKKRKAGRTIGRIYYAHPTSGEKYYLRILLNIVHGPTSYEEIKTVGGVTYQTFKETCNAL 774

Query: 194  GLLDDDNEWNEVLKQCSACGFPQQIRQLFVHIMVNCKVSDLKTLWNSHWKQIVDDILMNQ 373
            GLL+D+ EWN+ L + S      Q+R+LFV I++  +V+D+  LW ++WK + DDI+  +
Sbjct: 775  GLLNDNREWNDALNEASQWATGTQLRELFVTILLYGEVADIGKLWETNWKTLSDDIVYKK 834

Query: 374  RKLTGNPQLILNEKQQQFYAL 436
            R L  + +L LN++Q Q Y L
Sbjct: 835  RILFQHSRLELNDEQIQSYCL 855


>ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355507968|gb|AES89110.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1558

 Score =  130 bits (328), Expect = 9e-29
 Identities = 62/141 (43%), Positives = 92/141 (65%)
 Frame = +2

Query: 14   WNLRKRGKQIGRLAYTHHSSGELWYLRLLLTKVRGATSYDFLRTIDGKLWSTFHETCKEY 193
            W  RK G+ IGR+ Y H +SGE +YLR+LL  V G TSY+ ++T+ G  + TF ETC   
Sbjct: 742  WKKRKAGRTIGRIYYAHPTSGEKYYLRILLNIVHGPTSYEEIKTVGGVTYQTFKETCNAL 801

Query: 194  GLLDDDNEWNEVLKQCSACGFPQQIRQLFVHIMVNCKVSDLKTLWNSHWKQIVDDILMNQ 373
            GLL+D+ EWN+ L + S      Q+R+LFV I++  +V+D+  LW ++WK + DDI+  +
Sbjct: 802  GLLNDNREWNDALNEASQWATGTQLRELFVTILLYGEVADIGKLWETNWKTLSDDIVYKK 861

Query: 374  RKLTGNPQLILNEKQQQFYAL 436
            R L  + +L LN++Q Q Y L
Sbjct: 862  RILFQHSRLELNDEQIQSYCL 882


>gb|AAV44035.1| putative helicase [Oryza sativa Japonica Group]
          Length = 1634

 Score =  129 bits (323), Expect = 3e-28
 Identities = 59/141 (41%), Positives = 90/141 (63%)
 Frame = +2

Query: 14   WNLRKRGKQIGRLAYTHHSSGELWYLRLLLTKVRGATSYDFLRTIDGKLWSTFHETCKEY 193
            WN RK+GK IGR+ Y H +SG+ +YLR+LL  V+G  +++ +RT+DG +  +F   C+  
Sbjct: 958  WNKRKKGKMIGRIYYAHPASGDKYYLRMLLNTVKGPRTFEEIRTVDGVVHPSFKSACEAL 1017

Query: 194  GLLDDDNEWNEVLKQCSACGFPQQIRQLFVHIMVNCKVSDLKTLWNSHWKQIVDDILMNQ 373
            G LDDD EW E +++ S      Q+R LF  I+ +C+V+D K +W S W+ + +DI   Q
Sbjct: 1018 GFLDDDREWVECIREASNYASGNQLRHLFTTILCHCEVTDPKRIWESCWEDLSEDIEYKQ 1077

Query: 374  RKLTGNPQLILNEKQQQFYAL 436
            RK    P L L E+Q++ +AL
Sbjct: 1078 RKNLNYPTLRLTEQQKKGHAL 1098


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