BLASTX nr result
ID: Cnidium21_contig00038479
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00038479 (294 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ... 112 3e-23 gb|ACY01928.1| hypothetical protein [Beta vulgaris] 94 2e-17 emb|CAN65491.1| hypothetical protein VITISV_003157 [Vitis vinifera] 61 8e-08 emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera] 60 2e-07 >gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris] Length = 1631 Score = 112 bits (280), Expect = 3e-23 Identities = 57/98 (58%), Positives = 71/98 (72%), Gaps = 1/98 (1%) Frame = -3 Query: 292 LEELGPVVSNWKTQEMSFKVDGVTVTLKGDPTSVRSKISLKAMLRTIRKEGGGLWLELNQ 113 LE LG VVSNWKTQ+MSF++ GV TL GDPT RSK+SLKAMLRT+RKEGGGLWLE NQ Sbjct: 575 LETLGTVVSNWKTQKMSFQLGGVPYTLTGDPTLARSKVSLKAMLRTLRKEGGGLWLECNQ 634 Query: 112 V-ADEENQHNEGSTTPEIPDYLSEVIQKYCEVFDSPPG 2 V A + EIP +L E+++++ VF++P G Sbjct: 635 VEAGGAGSIRDSKVEQEIPPFLQELMRRFEGVFETPVG 672 >gb|ACY01928.1| hypothetical protein [Beta vulgaris] Length = 1583 Score = 93.6 bits (231), Expect = 2e-17 Identities = 46/97 (47%), Positives = 65/97 (67%) Frame = -3 Query: 292 LEELGPVVSNWKTQEMSFKVDGVTVTLKGDPTSVRSKISLKAMLRTIRKEGGGLWLELNQ 113 LE+LG +V+NWKTQ + +K TVTL+G+P R+++SLKAM RT+RKEGGG ++LNQ Sbjct: 511 LEKLGTMVTNWKTQTLQYKEGNETVTLRGNPALSRTEVSLKAMYRTLRKEGGGFLVDLNQ 570 Query: 112 VADEENQHNEGSTTPEIPDYLSEVIQKYCEVFDSPPG 2 +A E E PE+P L ++ Y +VF+ P G Sbjct: 571 MASHEGLPRE---LPEVPSCLQPLLSSYQQVFNMPLG 604 >emb|CAN65491.1| hypothetical protein VITISV_003157 [Vitis vinifera] Length = 1242 Score = 61.2 bits (147), Expect = 8e-08 Identities = 36/88 (40%), Positives = 49/88 (55%) Frame = -3 Query: 292 LEELGPVVSNWKTQEMSFKVDGVTVTLKGDPTSVRSKISLKAMLRTIRKEGGGLWLELNQ 113 L LG V NWK M K+ + + LKGDP+ R+++SLKAM+R ++ G G+W+EL Q Sbjct: 296 LGTLGDVKVNWKMLTMKIKLGKIVILLKGDPSLSRTEVSLKAMVRALQHHGQGVWVELCQ 355 Query: 112 VADEENQHNEGSTTPEIPDYLSEVIQKY 29 STT E LSE + KY Sbjct: 356 T----------STTSE----LSEGVHKY 369 >emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera] Length = 1448 Score = 60.1 bits (144), Expect = 2e-07 Identities = 32/93 (34%), Positives = 52/93 (55%) Frame = -3 Query: 292 LEELGPVVSNWKTQEMSFKVDGVTVTLKGDPTSVRSKISLKAMLRTIRKEGGGLWLELNQ 113 L LG V NWK M K+ + LKGDP+ R ++SLKAM R ++ G+W+E Q Sbjct: 92 LGTLGDVKVNWKMLTMKIKMGKAVIVLKGDPSLSRIEVSLKAMTRALQHHSQGVWVEXYQ 151 Query: 112 VADEENQHNEGSTTPEIPDYLSEVIQKYCEVFD 14 + + +EG E+P + EV+ ++ ++F+ Sbjct: 152 TSTTSDL-SEG--VQEVPKIVKEVLAQHQQIFE 181