BLASTX nr result
ID: Cnidium21_contig00038474
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00038474
(387 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containi... 196 1e-48
ref|XP_002308024.1| predicted protein [Populus trichocarpa] gi|2... 171 7e-41
ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containi... 169 2e-40
ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containi... 169 2e-40
ref|XP_002529510.1| pentatricopeptide repeat-containing protein,... 167 8e-40
>ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 196 bits (499), Expect = 1e-48
Identities = 90/124 (72%), Positives = 106/124 (85%)
Frame = +1
Query: 4 KAYKLLVKLADSGVLPDIMTYNILINGFCKTKNINSALKLFKELQFKGHSPDTVTYGTLI 183
KAYKLL++LADSGV+PDIMTYN+LINGFCK KNIN A KLF+ELQ KGHSPD+VTYGTLI
Sbjct: 512 KAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLI 571
Query: 184 DGLQRVDREKDSFALIDLMTSNGCAPNASVYKTLMTWSCRRRKFYVAFSFWLRYLRSLHG 363
DG RVDRE+D+F ++D M NGC P+++VYK LMTWSCR+ K VAFS WL+YLRSL
Sbjct: 572 DGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPS 631
Query: 364 QEEE 375
QE+E
Sbjct: 632 QEDE 635
Score = 62.4 bits (150), Expect = 4e-08
Identities = 31/94 (32%), Positives = 51/94 (54%)
Frame = +1
Query: 49 PDIMTYNILINGFCKTKNINSALKLFKELQFKGHSPDTVTYGTLIDGLQRVDREKDSFAL 228
P+ T+ IL+NG CK + ALK+F E+ KG P+T+ Y ++ GL + R D L
Sbjct: 199 PNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRL 258
Query: 229 IDLMTSNGCAPNASVYKTLMTWSCRRRKFYVAFS 330
++ M +GC P++ L+ C+ + AF+
Sbjct: 259 LNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFA 292
Score = 60.8 bits (146), Expect = 1e-07
Identities = 31/93 (33%), Positives = 49/93 (52%)
Frame = +1
Query: 25 KLADSGVLPDIMTYNILINGFCKTKNINSALKLFKELQFKGHSPDTVTYGTLIDGLQRVD 204
K+ +G+ PD++ Y ILI GFC+ ++ AL + ++ +G SPDT Y LI G V
Sbjct: 331 KMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVG 390
Query: 205 REKDSFALIDLMTSNGCAPNASVYKTLMTWSCR 303
+ +L ++ N C P + Y L+ CR
Sbjct: 391 LLDKARSLQLEISKNDCFPTSCTYTILICGMCR 423
Score = 58.5 bits (140), Expect = 5e-07
Identities = 26/103 (25%), Positives = 53/103 (51%)
Frame = +1
Query: 7 AYKLLVKLADSGVLPDIMTYNILINGFCKTKNINSALKLFKELQFKGHSPDTVTYGTLID 186
A K+ ++ G+ P+ M Y I+++G C+ K + +L ++ G PD++T L+D
Sbjct: 220 ALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLD 279
Query: 187 GLQRVDREKDSFALIDLMTSNGCAPNASVYKTLMTWSCRRRKF 315
G ++ + ++FAL+ L G Y +L+ R +++
Sbjct: 280 GFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRY 322
>ref|XP_002308024.1| predicted protein [Populus trichocarpa] gi|222854000|gb|EEE91547.1|
predicted protein [Populus trichocarpa]
Length = 789
Score = 171 bits (432), Expect = 7e-41
Identities = 77/125 (61%), Positives = 98/125 (78%)
Frame = +1
Query: 1 HKAYKLLVKLADSGVLPDIMTYNILINGFCKTKNINSALKLFKELQFKGHSPDTVTYGTL 180
HKAY++L++LADSG P I TYNIL+NGFCK N N A KLF+E+QFKG SPDTVTYGTL
Sbjct: 506 HKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTL 565
Query: 181 IDGLQRVDREKDSFALIDLMTSNGCAPNASVYKTLMTWSCRRRKFYVAFSFWLRYLRSLH 360
I+GL R RE+D++ + D M NGC P+A+VY+T+MTW CRR + AFS WL+YLR++
Sbjct: 566 INGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIR 625
Query: 361 GQEEE 375
QE+E
Sbjct: 626 SQEDE 630
Score = 69.7 bits (169), Expect = 2e-10
Identities = 39/107 (36%), Positives = 57/107 (53%)
Frame = +1
Query: 10 YKLLVKLADSGVLPDIMTYNILINGFCKTKNINSALKLFKELQFKGHSPDTVTYGTLIDG 189
Y ++KL LP++ T++ILI+G CK+ N+ AL LF E+ +G PD TY +I G
Sbjct: 184 YTRMMKL---NCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISG 240
Query: 190 LQRVDREKDSFALIDLMTSNGCAPNASVYKTLMTWSCRRRKFYVAFS 330
L R R D++ L D M +G P+ L+ C + AFS
Sbjct: 241 LCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFS 287
Score = 66.2 bits (160), Expect = 3e-09
Identities = 31/103 (30%), Positives = 58/103 (56%)
Frame = +1
Query: 7 AYKLLVKLADSGVLPDIMTYNILINGFCKTKNINSALKLFKELQFKGHSPDTVTYGTLID 186
A L ++ G+LPD TY ++I+G C++K ++ A +LF +++ G PD VT L++
Sbjct: 215 ALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLN 274
Query: 187 GLQRVDREKDSFALIDLMTSNGCAPNASVYKTLMTWSCRRRKF 315
G +DR ++F+L+ L +G + Y L+ R +++
Sbjct: 275 GFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRY 317
Score = 63.2 bits (152), Expect = 2e-08
Identities = 33/99 (33%), Positives = 54/99 (54%)
Frame = +1
Query: 7 AYKLLVKLADSGVLPDIMTYNILINGFCKTKNINSALKLFKELQFKGHSPDTVTYGTLID 186
A +LL ++ +SGV+PD + YN+LI GFC ++ A L E+ P+ TY LI
Sbjct: 355 ALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILIS 414
Query: 187 GLQRVDREKDSFALIDLMTSNGCAPNASVYKTLMTWSCR 303
G+ R +D+ + + M GC P+A + +L+ C+
Sbjct: 415 GMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCK 453
Score = 62.0 bits (149), Expect = 5e-08
Identities = 34/94 (36%), Positives = 48/94 (51%)
Frame = +1
Query: 7 AYKLLVKLADSGVLPDIMTYNILINGFCKTKNINSALKLFKELQFKGHSPDTVTYGTLID 186
AY+L K+ DSGV PD +T N L+NGFC ++ A L + + G+ D Y LI
Sbjct: 250 AYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIR 309
Query: 187 GLQRVDREKDSFALIDLMTSNGCAPNASVYKTLM 288
GL R R +D L M + P+ +Y +M
Sbjct: 310 GLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMM 343
Score = 55.8 bits (133), Expect = 3e-06
Identities = 28/93 (30%), Positives = 46/93 (49%)
Frame = +1
Query: 25 KLADSGVLPDIMTYNILINGFCKTKNINSALKLFKELQFKGHSPDTVTYGTLIDGLQRVD 204
K+ + V PD+ Y I++ G + + AL+L E+ G PDTV Y LI G +
Sbjct: 326 KMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMG 385
Query: 205 REKDSFALIDLMTSNGCAPNASVYKTLMTWSCR 303
++ +L ++ + C PN Y L++ CR
Sbjct: 386 LLSEARSLQLEISRHDCFPNVKTYSILISGMCR 418
>ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 169 bits (428), Expect = 2e-40
Identities = 77/124 (62%), Positives = 91/124 (73%)
Frame = +1
Query: 4 KAYKLLVKLADSGVLPDIMTYNILINGFCKTKNINSALKLFKELQFKGHSPDTVTYGTLI 183
KAYKLL++L DSGVLPDI TYNILINGFCK NIN A KLFKE+Q KGH PD+VTYGTLI
Sbjct: 509 KAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLI 568
Query: 184 DGLQRVDREKDSFALIDLMTSNGCAPNASVYKTLMTWSCRRRKFYVAFSFWLRYLRSLHG 363
DGL R R +D+ + + M GC P +S YKT+MTWSCR +A S W++YLR G
Sbjct: 569 DGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRG 628
Query: 364 QEEE 375
E+E
Sbjct: 629 WEDE 632
Score = 65.5 bits (158), Expect = 4e-09
Identities = 34/115 (29%), Positives = 63/115 (54%)
Frame = +1
Query: 7 AYKLLVKLADSGVLPDIMTYNILINGFCKTKNINSALKLFKELQFKGHSPDTVTYGTLID 186
A L ++ D G+LP+ + Y+I+++G C+ K I A +LF +++ G + D +TY L++
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLN 276
Query: 187 GLQRVDREKDSFALIDLMTSNGCAPNASVYKTLMTWSCRRRKFYVAFSFWLRYLR 351
G + D+F L+ L+T +G Y L+ R R++ A ++ + LR
Sbjct: 277 GFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLR 331
Score = 61.2 bits (147), Expect = 8e-08
Identities = 30/107 (28%), Positives = 56/107 (52%)
Frame = +1
Query: 4 KAYKLLVKLADSGVLPDIMTYNILINGFCKTKNINSALKLFKELQFKGHSPDTVTYGTLI 183
KA + + D PD+ +N++++ + + AL ++ ++ +PD VTYG LI
Sbjct: 146 KAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILI 205
Query: 184 DGLQRVDREKDSFALIDLMTSNGCAPNASVYKTLMTWSCRRRKFYVA 324
GL + + +D+ L D MT G PN +Y +++ C+ +K + A
Sbjct: 206 HGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDA 252
Score = 60.5 bits (145), Expect = 1e-07
Identities = 29/85 (34%), Positives = 46/85 (54%)
Frame = +1
Query: 49 PDIMTYNILINGFCKTKNINSALKLFKELQFKGHSPDTVTYGTLIDGLQRVDREKDSFAL 228
PD++TY ILI+G CKT AL LF E+ +G P+ + Y ++ GL + + D+ L
Sbjct: 196 PDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRL 255
Query: 229 IDLMTSNGCAPNASVYKTLMTWSCR 303
M ++GC + Y L+ C+
Sbjct: 256 FSKMRASGCNRDLITYNVLLNGFCK 280
Score = 60.1 bits (144), Expect = 2e-07
Identities = 31/94 (32%), Positives = 50/94 (53%)
Frame = +1
Query: 7 AYKLLVKLADSGVLPDIMTYNILINGFCKTKNINSALKLFKELQFKGHSPDTVTYGTLID 186
A +L K+ SG D++TYN+L+NGFCK+ ++ A L + L GH + YG LI+
Sbjct: 252 AQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLIN 311
Query: 187 GLQRVDREKDSFALIDLMTSNGCAPNASVYKTLM 288
GL R R +++ M P+ +Y ++
Sbjct: 312 GLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMI 345
>ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 169 bits (428), Expect = 2e-40
Identities = 77/124 (62%), Positives = 91/124 (73%)
Frame = +1
Query: 4 KAYKLLVKLADSGVLPDIMTYNILINGFCKTKNINSALKLFKELQFKGHSPDTVTYGTLI 183
KAYKLL++L DSGVLPDI TYNILINGFCK NIN A KLFKE+Q KGH PD+VTYGTLI
Sbjct: 509 KAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLI 568
Query: 184 DGLQRVDREKDSFALIDLMTSNGCAPNASVYKTLMTWSCRRRKFYVAFSFWLRYLRSLHG 363
DGL R R +D+ + + M GC P +S YKT+MTWSCR +A S W++YLR G
Sbjct: 569 DGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRG 628
Query: 364 QEEE 375
E+E
Sbjct: 629 WEDE 632
Score = 65.5 bits (158), Expect = 4e-09
Identities = 34/115 (29%), Positives = 63/115 (54%)
Frame = +1
Query: 7 AYKLLVKLADSGVLPDIMTYNILINGFCKTKNINSALKLFKELQFKGHSPDTVTYGTLID 186
A L ++ D G+LP+ + Y+I+++G C+ K I A +LF +++ G + D +TY L++
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLN 276
Query: 187 GLQRVDREKDSFALIDLMTSNGCAPNASVYKTLMTWSCRRRKFYVAFSFWLRYLR 351
G + D+F L+ L+T +G Y L+ R R++ A ++ + LR
Sbjct: 277 GFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLR 331
Score = 60.8 bits (146), Expect = 1e-07
Identities = 30/107 (28%), Positives = 56/107 (52%)
Frame = +1
Query: 4 KAYKLLVKLADSGVLPDIMTYNILINGFCKTKNINSALKLFKELQFKGHSPDTVTYGTLI 183
KA + + D PD+ +N++++ + + AL ++ ++ +PD VTYG LI
Sbjct: 146 KAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILI 205
Query: 184 DGLQRVDREKDSFALIDLMTSNGCAPNASVYKTLMTWSCRRRKFYVA 324
GL + + +D+ L D MT G PN +Y +++ C+ +K + A
Sbjct: 206 HGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDA 252
Score = 60.5 bits (145), Expect = 1e-07
Identities = 29/85 (34%), Positives = 46/85 (54%)
Frame = +1
Query: 49 PDIMTYNILINGFCKTKNINSALKLFKELQFKGHSPDTVTYGTLIDGLQRVDREKDSFAL 228
PD++TY ILI+G CKT AL LF E+ +G P+ + Y ++ GL + + D+ L
Sbjct: 196 PDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRL 255
Query: 229 IDLMTSNGCAPNASVYKTLMTWSCR 303
M ++GC + Y L+ C+
Sbjct: 256 FSKMRASGCNRDLITYNVLLNGFCK 280
Score = 60.1 bits (144), Expect = 2e-07
Identities = 31/94 (32%), Positives = 50/94 (53%)
Frame = +1
Query: 7 AYKLLVKLADSGVLPDIMTYNILINGFCKTKNINSALKLFKELQFKGHSPDTVTYGTLID 186
A +L K+ SG D++TYN+L+NGFCK+ ++ A L + L GH + YG LI+
Sbjct: 252 AQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLIN 311
Query: 187 GLQRVDREKDSFALIDLMTSNGCAPNASVYKTLM 288
GL R R +++ M P+ +Y ++
Sbjct: 312 GLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMI 345
>ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223531026|gb|EEF32879.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 804
Score = 167 bits (423), Expect = 8e-40
Identities = 76/125 (60%), Positives = 97/125 (77%)
Frame = +1
Query: 4 KAYKLLVKLADSGVLPDIMTYNILINGFCKTKNINSALKLFKELQFKGHSPDTVTYGTLI 183
KAY +L++L DSG P+I+TYNILI+GFCK NIN A KLFKELQ KG SPD+VTYGTLI
Sbjct: 507 KAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLI 566
Query: 184 DGLQRVDREKDSFALIDLMTSNGCAPNASVYKTLMTWSCRRRKFYVAFSFWLRYLRSLHG 363
+GL +RE+D+F ++D + NGC P VYK+ MTWSCRR K +AFS WL+YLRS+ G
Sbjct: 567 NGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPG 626
Query: 364 QEEEI 378
++ E+
Sbjct: 627 RDSEV 631
Score = 67.8 bits (164), Expect = 9e-10
Identities = 36/103 (34%), Positives = 54/103 (52%)
Frame = +1
Query: 7 AYKLLVKLADSGVLPDIMTYNILINGFCKTKNINSALKLFKELQFKGHSPDTVTYGTLID 186
AY+L + + D G +PD +TYN L++GFCK ++ AL L K + + D Y LID
Sbjct: 250 AYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLID 309
Query: 187 GLQRVDREKDSFALIDLMTSNGCAPNASVYKTLMTWSCRRRKF 315
GL R R +D+ MT + P+ +Y +M + KF
Sbjct: 310 GLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKF 352
Score = 62.0 bits (149), Expect = 5e-08
Identities = 31/98 (31%), Positives = 55/98 (56%)
Frame = +1
Query: 10 YKLLVKLADSGVLPDIMTYNILINGFCKTKNINSALKLFKELQFKGHSPDTVTYGTLIDG 189
Y ++KL LP+I T++ILI+G CK+ +AL++F E+ + P+ +TY +I G
Sbjct: 184 YNRMLKL---NCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISG 240
Query: 190 LQRVDREKDSFALIDLMTSNGCAPNASVYKTLMTWSCR 303
L + + ++ L M +GC P++ Y L+ C+
Sbjct: 241 LCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCK 278