BLASTX nr result

ID: Cnidium21_contig00038467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038467
         (664 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38715.3| unnamed protein product [Vitis vinifera]              296   2e-78
emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]   296   2e-78
ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi comple...   288   5e-76
ref|XP_002320901.1| predicted protein [Populus trichocarpa] gi|2...   287   1e-75
ref|XP_003626608.1| Pentatricopeptide repeat-containing protein ...   276   2e-72

>emb|CBI38715.3| unnamed protein product [Vitis vinifera]
          Length = 429

 Score =  296 bits (758), Expect = 2e-78
 Identities = 147/220 (66%), Positives = 181/220 (82%)
 Frame = +3

Query: 3   PSTILSQNRVQKLISSQSDPLLAKEIFDLASSQPNFHPSYSTFHYLILKLAHSHHFSHIN 182
           PS I S +RVQKLI+SQSDPLLAKEIFDLAS QPNF  SYS+FH LILKL  +  FS + 
Sbjct: 53  PSPIGSPSRVQKLIASQSDPLLAKEIFDLASLQPNFKHSYSSFHILILKLGWARQFSLMQ 112

Query: 183 SLLTHLKSRNYPISPSLFSRLIRVYGETNHPEKALKLFYTILEFNTKPLPKHLNAILRVL 362
            LL  LKS  Y I+PSLFS +I +YGE N P++ALK F+++L+F++KPLPKHLN +L++L
Sbjct: 113 DLLMRLKSEQYSINPSLFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNRLLQLL 172

Query: 363 VARRGFLRSALDLFRSAHRYGVLANVESYNILMSAFCLNCDLSIAYRLFNEMFKRDLVPD 542
           V+ R ++R A DLF+SAHRYGV  + +SYNILMSAFC N DLSIAY LFN+MFKRD+ PD
Sbjct: 173 VSHRNYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPD 232

Query: 543 IESYRILIRSAHRRSQVSKAVDLLEDMLNKGFVPDALSYT 662
           +ESYRIL++   R+SQV++AVDLLEDMLNKG+VPDALSYT
Sbjct: 233 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGYVPDALSYT 272


>emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
          Length = 422

 Score =  296 bits (758), Expect = 2e-78
 Identities = 147/220 (66%), Positives = 181/220 (82%)
 Frame = +3

Query: 3   PSTILSQNRVQKLISSQSDPLLAKEIFDLASSQPNFHPSYSTFHYLILKLAHSHHFSHIN 182
           PS I S +RVQKLI+SQSDPLLAKEIFDLAS QPNF  SYS+FH LILKL  +  FS + 
Sbjct: 8   PSPIGSPSRVQKLIASQSDPLLAKEIFDLASLQPNFKHSYSSFHILILKLGWARQFSLMQ 67

Query: 183 SLLTHLKSRNYPISPSLFSRLIRVYGETNHPEKALKLFYTILEFNTKPLPKHLNAILRVL 362
            LL  LKS  Y I+PSLFS +I +YGE N P++ALK F+++L+F++KPLPKHLN +L++L
Sbjct: 68  DLLMRLKSEQYSINPSLFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNXLLQLL 127

Query: 363 VARRGFLRSALDLFRSAHRYGVLANVESYNILMSAFCLNCDLSIAYRLFNEMFKRDLVPD 542
           V+ R ++R A DLF+SAHRYGV  + +SYNILMSAFC N DLSIAY LFN+MFKRD+ PD
Sbjct: 128 VSHRNYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPD 187

Query: 543 IESYRILIRSAHRRSQVSKAVDLLEDMLNKGFVPDALSYT 662
           +ESYRIL++   R+SQV++AVDLLEDMLNKG+VPDALSYT
Sbjct: 188 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGYVPDALSYT 227


>ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Vitis
           vinifera]
          Length = 1105

 Score =  288 bits (738), Expect = 5e-76
 Identities = 143/216 (66%), Positives = 177/216 (81%)
 Frame = +3

Query: 3   PSTILSQNRVQKLISSQSDPLLAKEIFDLASSQPNFHPSYSTFHYLILKLAHSHHFSHIN 182
           PS I S +RVQKLI+SQSDPLLAKEIFDLAS QPNF  SYS+FH LILKL  +  FS + 
Sbjct: 39  PSPIGSPSRVQKLIASQSDPLLAKEIFDLASLQPNFKHSYSSFHILILKLGWARQFSLMQ 98

Query: 183 SLLTHLKSRNYPISPSLFSRLIRVYGETNHPEKALKLFYTILEFNTKPLPKHLNAILRVL 362
            LL  LKS  Y I+PSLFS +I +YGE N P++ALK F+++L+F++KPLPKHLN +L++L
Sbjct: 99  DLLMRLKSEQYSINPSLFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNRLLQLL 158

Query: 363 VARRGFLRSALDLFRSAHRYGVLANVESYNILMSAFCLNCDLSIAYRLFNEMFKRDLVPD 542
           V+ R ++R A DLF+SAHRYGV  + +SYNILMSAFC N DLSIAY LFN+MFKRD+ PD
Sbjct: 159 VSHRNYIRPAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPD 218

Query: 543 IESYRILIRSAHRRSQVSKAVDLLEDMLNKGFVPDA 650
           +ESYRIL++   R+SQV++AVDLLEDMLNKG+VPDA
Sbjct: 219 VESYRILMQGLCRKSQVNRAVDLLEDMLNKGYVPDA 254


>ref|XP_002320901.1| predicted protein [Populus trichocarpa] gi|222861674|gb|EEE99216.1|
           predicted protein [Populus trichocarpa]
          Length = 475

 Score =  287 bits (734), Expect = 1e-75
 Identities = 140/219 (63%), Positives = 178/219 (81%)
 Frame = +3

Query: 6   STILSQNRVQKLISSQSDPLLAKEIFDLASSQPNFHPSYSTFHYLILKLAHSHHFSHINS 185
           S I S +RVQKLI+SQSDPLLAKEIFD AS QPNF  SYS++  LILKL  + +FS I+ 
Sbjct: 62  SPIGSPSRVQKLIASQSDPLLAKEIFDYASRQPNFQHSYSSYLILILKLGRAKYFSFIDD 121

Query: 186 LLTHLKSRNYPISPSLFSRLIRVYGETNHPEKALKLFYTILEFNTKPLPKHLNAILRVLV 365
           LLT LKS+NYP++P+LFS +I +YGE N P+KALK+FYTIL+F+  P PKHLN IL +LV
Sbjct: 122 LLTDLKSKNYPVTPTLFSYIINIYGEANLPDKALKIFYTILKFDCNPSPKHLNGILEILV 181

Query: 366 ARRGFLRSALDLFRSAHRYGVLANVESYNILMSAFCLNCDLSIAYRLFNEMFKRDLVPDI 545
           + + +++ A DLF+ AH Y V  N +SYNIL+ AFCLN  +S+AY LFN+MFKRD++PD+
Sbjct: 182 SHQNYIKPAFDLFKDAHTYDVFPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDV 241

Query: 546 ESYRILIRSAHRRSQVSKAVDLLEDMLNKGFVPDALSYT 662
           ESYRIL+++  R+SQV+ AVDLLEDMLNKG+VPDALSYT
Sbjct: 242 ESYRILMQALCRKSQVNGAVDLLEDMLNKGYVPDALSYT 280


>ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240852|gb|ABD32710.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355501623|gb|AES82826.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 451

 Score =  276 bits (707), Expect = 2e-72
 Identities = 141/220 (64%), Positives = 173/220 (78%), Gaps = 1/220 (0%)
 Frame = +3

Query: 6   STILSQNRVQKLISSQSDPLLAKEIFDLASSQPNFHPSYSTFHYLILKLAHSHHFSHINS 185
           S I S  RVQKLI+SQSDPLLAKEIFD AS QPNF  +YST+  LILK   S HFS ++ 
Sbjct: 37  SPIGSPTRVQKLIASQSDPLLAKEIFDYASLQPNFRHNYSTYLILILKFGRSKHFSLLDD 96

Query: 186 LLTHLKSRN-YPISPSLFSRLIRVYGETNHPEKALKLFYTILEFNTKPLPKHLNAILRVL 362
           LL  LKS +  PI+P+LFS LI++YGE N P+KAL  FY +L+FN KPL KHLN IL +L
Sbjct: 97  LLRRLKSESSQPITPTLFSYLIKIYGEANLPDKALNTFYIMLQFNIKPLTKHLNRILDIL 156

Query: 363 VARRGFLRSALDLFRSAHRYGVLANVESYNILMSAFCLNCDLSIAYRLFNEMFKRDLVPD 542
           V+ R +LR A DLF+ AH++GV  + +SYNILM AFCLN D+SIAY LFN+MFKRD+VPD
Sbjct: 157 VSHRNYLRPAFDLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPD 216

Query: 543 IESYRILIRSAHRRSQVSKAVDLLEDMLNKGFVPDALSYT 662
           I+SYRIL+++  R+SQV+ AVDL EDMLNKGFVPD+ +YT
Sbjct: 217 IQSYRILMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYT 256


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