BLASTX nr result
ID: Cnidium21_contig00038445
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00038445
(523 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi... 250 8e-65
ref|XP_002510452.1| pentatricopeptide repeat-containing protein,... 239 1e-61
emb|CBI19766.3| unnamed protein product [Vitis vinifera] 237 9e-61
ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containi... 232 2e-59
ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containi... 232 2e-59
>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Vitis vinifera]
Length = 1545
Score = 250 bits (639), Expect = 8e-65
Identities = 118/174 (67%), Positives = 146/174 (83%)
Frame = +1
Query: 1 SKALELFRDMLLERVEPNGITLASAISACASHKDIIKGKELHCIAIKVGYADSVLVGNSL 180
S+ALELFR+MLL +EPNG+T+ S ISACAS K + KG ELH +A+K+G + +LVGNSL
Sbjct: 338 SQALELFREMLLAGIEPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGNSL 397
Query: 181 ISMYSKCDKLEAAEEVFDKIIEKDVYTYNSMIGGYIQAGYCGKAHYLFTRMRDSGVQPNV 360
I MYSK +LE A VFD I++KDVYT+NSMIGGY QAGYCGKA+ LF +M +S V PNV
Sbjct: 398 IDMYSKSGELEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNV 457
Query: 361 VTWNVMIAGYIQNEGEDQALDLFHKMEKDGIIKRDTATWNALISGHVQNGNKNK 522
VTWN MI+GYIQN EDQA+DLFH+MEKDG+IKRDTA+WN+LI+G++QNG+KNK
Sbjct: 458 VTWNAMISGYIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKNK 511
Score = 120 bits (301), Expect = 1e-25
Identities = 58/173 (33%), Positives = 102/173 (58%)
Frame = +1
Query: 4 KALELFRDMLLERVEPNGITLASAISACASHKDIIKGKELHCIAIKVGYADSVLVGNSLI 183
+ ++ F M+ + + P+ L + AC + D GK +H + I+ G ++ V NS++
Sbjct: 168 EVVQHFFFMMEDGIVPDEFLLPKILQACGNCGDAETGKLIHSLVIRCGMNFNIRVSNSIL 227
Query: 184 SMYSKCDKLEAAEEVFDKIIEKDVYTYNSMIGGYIQAGYCGKAHYLFTRMRDSGVQPNVV 363
++Y+KC +L A F+ + +D ++NS+I GY Q G K+H LF +M++ G++P +V
Sbjct: 228 AVYAKCGRLSCARRFFENMDYRDRVSWNSIITGYCQKGELEKSHQLFEKMQEEGIEPGLV 287
Query: 364 TWNVMIAGYIQNEGEDQALDLFHKMEKDGIIKRDTATWNALISGHVQNGNKNK 522
TWN++I Y Q+ D A++L KME I+ D TW ++ISG QN +++
Sbjct: 288 TWNILINSYSQSGKCDDAMELMKKMESFRIVP-DVFTWTSMISGFAQNNRRSQ 339
Score = 80.9 bits (198), Expect = 1e-13
Identities = 47/149 (31%), Positives = 77/149 (51%)
Frame = +1
Query: 1 SKALELFRDMLLERVEPNGITLASAISACASHKDIIKGKELHCIAIKVGYADSVLVGNSL 180
+KAL +FR M + PN +T+ S + ACA+ K KE+H ++ + V N L
Sbjct: 510 NKALGIFRQMQSFCIRPNSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCL 569
Query: 181 ISMYSKCDKLEAAEEVFDKIIEKDVYTYNSMIGGYIQAGYCGKAHYLFTRMRDSGVQPNV 360
I Y+K + A+ +F I KD+ ++NS+I GY+ G A LF +M GV+P+
Sbjct: 570 IDTYAKSGNIVYAQTIFQGISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSR 629
Query: 361 VTWNVMIAGYIQNEGEDQALDLFHKMEKD 447
T+ +I + + D+ +F M +D
Sbjct: 630 GTFLSIIYAFSLSGMVDKGKQVFSSMMED 658
>ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223551153|gb|EEF52639.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1218
Score = 239 bits (611), Expect = 1e-61
Identities = 114/174 (65%), Positives = 141/174 (81%)
Frame = +1
Query: 1 SKALELFRDMLLERVEPNGITLASAISACASHKDIIKGKELHCIAIKVGYADSVLVGNSL 180
SKAL LF DM+L RVEPNG+T++SA+SACAS K + +G E+H +A+K+G+ + VLVGNSL
Sbjct: 327 SKALHLFNDMILARVEPNGVTISSAVSACASLKVLNEGLEIHALAVKLGFVEDVLVGNSL 386
Query: 181 ISMYSKCDKLEAAEEVFDKIIEKDVYTYNSMIGGYIQAGYCGKAHYLFTRMRDSGVQPNV 360
I MYSKC KLE A +VFD + EKDVYT+NSMIGGY Q GYCGKAH LF +M+ S QPN
Sbjct: 387 IDMYSKCGKLENAWKVFDMMPEKDVYTWNSMIGGYCQVGYCGKAHMLFMKMQKSETQPNA 446
Query: 361 VTWNVMIAGYIQNEGEDQALDLFHKMEKDGIIKRDTATWNALISGHVQNGNKNK 522
+TWN MI GYI N EDQA+DLF +ME+DG IKRDTA+WN+LISG++Q G K+K
Sbjct: 447 ITWNNMIWGYIHNGDEDQAMDLFRRMEEDGKIKRDTASWNSLISGYLQIGQKDK 500
Score = 124 bits (312), Expect = 6e-27
Identities = 64/173 (36%), Positives = 100/173 (57%)
Frame = +1
Query: 4 KALELFRDMLLERVEPNGITLASAISACASHKDIIKGKELHCIAIKVGYADSVLVGNSLI 183
+ +ELF M+ E P+ L + AC + +DI G+ +H +AIK G V NS++
Sbjct: 157 EVVELFYMMMEENCLPDAFLLPKILQACGNSRDIKSGEMVHSLAIKCGVDGYPFVNNSIL 216
Query: 184 SMYSKCDKLEAAEEVFDKIIEKDVYTYNSMIGGYIQAGYCGKAHYLFTRMRDSGVQPNVV 363
++Y+KC KL A + F+ + + + +N++I GY Q G +A LF MR+ G++P +V
Sbjct: 217 AVYAKCGKLSLASKCFEMMDKSETAAWNALISGYCQHGQIEEAQRLFDAMREEGIEPGLV 276
Query: 364 TWNVMIAGYIQNEGEDQALDLFHKMEKDGIIKRDTATWNALISGHVQNGNKNK 522
+WN++IAGY Q D A++L KME G D TW ++ISG QN +K
Sbjct: 277 SWNILIAGYNQLGYFDIAMELMKKMEVLG-TSPDVVTWTSMISGLAQNDKASK 328
Score = 73.2 bits (178), Expect = 2e-11
Identities = 40/124 (32%), Positives = 67/124 (54%)
Frame = +1
Query: 4 KALELFRDMLLERVEPNGITLASAISACASHKDIIKGKELHCIAIKVGYADSVLVGNSLI 183
KAL +FR M + N +T+ S + ACA+ + KE+H I+ + + NSLI
Sbjct: 500 KALSIFRQMQSFSININSVTILSVLPACANLIALKMVKEIHGCVIRRNLDSLLPITNSLI 559
Query: 184 SMYSKCDKLEAAEEVFDKIIEKDVYTYNSMIGGYIQAGYCGKAHYLFTRMRDSGVQPNVV 363
Y+K + + +FD+ + KD T+NS+I GY+ G A L +M+ G++PN
Sbjct: 560 DTYAKSGNIGYSRTIFDRALFKDFITWNSLIAGYVLFGCSDAALGLVDQMKKLGIKPNRS 619
Query: 364 TWNV 375
T+++
Sbjct: 620 TFSL 623
>emb|CBI19766.3| unnamed protein product [Vitis vinifera]
Length = 494
Score = 237 bits (604), Expect = 9e-61
Identities = 111/165 (67%), Positives = 137/165 (83%)
Frame = +1
Query: 28 MLLERVEPNGITLASAISACASHKDIIKGKELHCIAIKVGYADSVLVGNSLISMYSKCDK 207
MLL +EPNG+T+ S ISACAS K + KG ELH +A+K+G + +LVGNSLI MYSK +
Sbjct: 1 MLLAGIEPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMYSKSGE 60
Query: 208 LEAAEEVFDKIIEKDVYTYNSMIGGYIQAGYCGKAHYLFTRMRDSGVQPNVVTWNVMIAG 387
LE A VFD I++KDVYT+NSMIGGY QAGYCGKA+ LF +M +S V PNVVTWN MI+G
Sbjct: 61 LEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMISG 120
Query: 388 YIQNEGEDQALDLFHKMEKDGIIKRDTATWNALISGHVQNGNKNK 522
YIQN EDQA+DLFH+MEKDG+IKRDTA+WN+LI+G++QNG+KNK
Sbjct: 121 YIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKNK 165
Score = 80.9 bits (198), Expect = 1e-13
Identities = 47/149 (31%), Positives = 77/149 (51%)
Frame = +1
Query: 1 SKALELFRDMLLERVEPNGITLASAISACASHKDIIKGKELHCIAIKVGYADSVLVGNSL 180
+KAL +FR M + PN +T+ S + ACA+ K KE+H ++ + V N L
Sbjct: 164 NKALGIFRQMQSFCIRPNSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCL 223
Query: 181 ISMYSKCDKLEAAEEVFDKIIEKDVYTYNSMIGGYIQAGYCGKAHYLFTRMRDSGVQPNV 360
I Y+K + A+ +F I KD+ ++NS+I GY+ G A LF +M GV+P+
Sbjct: 224 IDTYAKSGNIVYAQTIFQGISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSR 283
Query: 361 VTWNVMIAGYIQNEGEDQALDLFHKMEKD 447
T+ +I + + D+ +F M +D
Sbjct: 284 GTFLSIIYAFSLSGMVDKGKQVFSSMMED 312
>ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like, partial [Cucumis sativus]
Length = 1090
Score = 232 bits (592), Expect = 2e-59
Identities = 116/174 (66%), Positives = 137/174 (78%)
Frame = +1
Query: 1 SKALELFRDMLLERVEPNGITLASAISACASHKDIIKGKELHCIAIKVGYADSVLVGNSL 180
S+AL+ F+ M+L VEPN IT+ASA SACAS K + G E+HC AIK+G A LVGNSL
Sbjct: 333 SQALDFFKKMILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSL 392
Query: 181 ISMYSKCDKLEAAEEVFDKIIEKDVYTYNSMIGGYIQAGYCGKAHYLFTRMRDSGVQPNV 360
I MYSKC KLEAA VFD I+EKDVYT+NSMIGGY QAGY GKA+ LF R+R+S V PNV
Sbjct: 393 IDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNV 452
Query: 361 VTWNVMIAGYIQNEGEDQALDLFHKMEKDGIIKRDTATWNALISGHVQNGNKNK 522
VTWN MI+G IQN EDQA+DLF MEKDG +KR+TA+WN+LI+G+ Q G KNK
Sbjct: 453 VTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQLGEKNK 506
Score = 101 bits (252), Expect = 6e-20
Identities = 57/168 (33%), Positives = 92/168 (54%)
Frame = +1
Query: 4 KALELFRDMLLERVEPNGITLASAISACASHKDIIKGKELHCIAIKVGYADSVLVGNSLI 183
+ +ELF M+ + V P+ + AC + +D+ K +H + I+ G + + + NS++
Sbjct: 163 EVVELFFLMMGDGVLPDAFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSIL 222
Query: 184 SMYSKCDKLEAAEEVFDKIIEKDVYTYNSMIGGYIQAGYCGKAHYLFTRMRDSGVQPNVV 363
+ + KC KL A + F + E+D ++N MI GY Q G +A L M + G +P +V
Sbjct: 223 TAFVKCGKLSLARKFFGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLV 282
Query: 364 TWNVMIAGYIQNEGEDQALDLFHKMEKDGIIKRDTATWNALISGHVQN 507
T+N+MIA Y Q D +DL KME G+ D TW ++ISG Q+
Sbjct: 283 TYNIMIASYSQLGDCDLVIDLKKKMESVGLAP-DVYTWTSMISGFSQS 329
Score = 84.7 bits (208), Expect = 7e-15
Identities = 46/130 (35%), Positives = 71/130 (54%)
Frame = +1
Query: 1 SKALELFRDMLLERVEPNGITLASAISACASHKDIIKGKELHCIAIKVGYADSVLVGNSL 180
+KAL +FR M PN +T+ S + ACA+ K KE+H ++ + V NSL
Sbjct: 505 NKALAIFRQMQSLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANSL 564
Query: 181 ISMYSKCDKLEAAEEVFDKIIEKDVYTYNSMIGGYIQAGYCGKAHYLFTRMRDSGVQPNV 360
+ Y+K ++ + VF+ + KD+ T+NS+I GYI G A LF +MR+ G++PN
Sbjct: 565 VDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIRPNR 624
Query: 361 VTWNVMIAGY 390
T +I Y
Sbjct: 625 GTLASIIHAY 634
Score = 59.3 bits (142), Expect = 3e-07
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 37/188 (19%)
Frame = +1
Query: 61 TLASAISACASHKDIIKGKELHCIAIKVGYADSV--LVGNSLISMYSKCDKLEAAEEVFD 234
T + + C I G+ELH +++G V V L+SMY+KC L+ A +VFD
Sbjct: 82 TYINLLQTCIDVGSIELGRELH---VRMGLVHRVNPFVETKLVSMYAKCGCLKDARKVFD 138
Query: 235 KIIEKDVYTYNSMIGGYIQAGYCGKAHYLFTRMRDSGVQPNVVTW--------------- 369
+ E+++YT+++MIG Y + + LF M GV P+ +
Sbjct: 139 GMQERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVLPDAFLFPKILQACGNCEDLET 198
Query: 370 --------------------NVMIAGYIQNEGEDQALDLFHKMEKDGIIKRDTATWNALI 489
N ++ +++ A F M+ +RD +WN +I
Sbjct: 199 VKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMD-----ERDGVSWNVMI 253
Query: 490 SGHVQNGN 513
+G+ Q GN
Sbjct: 254 AGYCQKGN 261
>ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Cucumis sativus]
Length = 1463
Score = 232 bits (592), Expect = 2e-59
Identities = 116/174 (66%), Positives = 137/174 (78%)
Frame = +1
Query: 1 SKALELFRDMLLERVEPNGITLASAISACASHKDIIKGKELHCIAIKVGYADSVLVGNSL 180
S+AL+ F+ M+L VEPN IT+ASA SACAS K + G E+HC AIK+G A LVGNSL
Sbjct: 333 SQALDFFKKMILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSL 392
Query: 181 ISMYSKCDKLEAAEEVFDKIIEKDVYTYNSMIGGYIQAGYCGKAHYLFTRMRDSGVQPNV 360
I MYSKC KLEAA VFD I+EKDVYT+NSMIGGY QAGY GKA+ LF R+R+S V PNV
Sbjct: 393 IDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNV 452
Query: 361 VTWNVMIAGYIQNEGEDQALDLFHKMEKDGIIKRDTATWNALISGHVQNGNKNK 522
VTWN MI+G IQN EDQA+DLF MEKDG +KR+TA+WN+LI+G+ Q G KNK
Sbjct: 453 VTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQLGEKNK 506
Score = 101 bits (252), Expect = 6e-20
Identities = 57/168 (33%), Positives = 92/168 (54%)
Frame = +1
Query: 4 KALELFRDMLLERVEPNGITLASAISACASHKDIIKGKELHCIAIKVGYADSVLVGNSLI 183
+ +ELF M+ + V P+ + AC + +D+ K +H + I+ G + + + NS++
Sbjct: 163 EVVELFFLMMGDGVLPDAFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSIL 222
Query: 184 SMYSKCDKLEAAEEVFDKIIEKDVYTYNSMIGGYIQAGYCGKAHYLFTRMRDSGVQPNVV 363
+ + KC KL A + F + E+D ++N MI GY Q G +A L M + G +P +V
Sbjct: 223 TAFVKCGKLSLARKFFGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLV 282
Query: 364 TWNVMIAGYIQNEGEDQALDLFHKMEKDGIIKRDTATWNALISGHVQN 507
T+N+MIA Y Q D +DL KME G+ D TW ++ISG Q+
Sbjct: 283 TYNIMIASYSQLGDCDLVIDLKKKMESVGLAP-DVYTWTSMISGFSQS 329
Score = 84.7 bits (208), Expect = 7e-15
Identities = 46/130 (35%), Positives = 71/130 (54%)
Frame = +1
Query: 1 SKALELFRDMLLERVEPNGITLASAISACASHKDIIKGKELHCIAIKVGYADSVLVGNSL 180
+KAL +FR M PN +T+ S + ACA+ K KE+H ++ + V NSL
Sbjct: 505 NKALAIFRQMQSLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANSL 564
Query: 181 ISMYSKCDKLEAAEEVFDKIIEKDVYTYNSMIGGYIQAGYCGKAHYLFTRMRDSGVQPNV 360
+ Y+K ++ + VF+ + KD+ T+NS+I GYI G A LF +MR+ G++PN
Sbjct: 565 VDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIRPNR 624
Query: 361 VTWNVMIAGY 390
T +I Y
Sbjct: 625 GTLASIIHAY 634
Score = 59.3 bits (142), Expect = 3e-07
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 37/188 (19%)
Frame = +1
Query: 61 TLASAISACASHKDIIKGKELHCIAIKVGYADSV--LVGNSLISMYSKCDKLEAAEEVFD 234
T + + C I G+ELH +++G V V L+SMY+KC L+ A +VFD
Sbjct: 82 TYINLLQTCIDVGSIELGRELH---VRMGLVHRVNPFVETKLVSMYAKCGCLKDARKVFD 138
Query: 235 KIIEKDVYTYNSMIGGYIQAGYCGKAHYLFTRMRDSGVQPNVVTW--------------- 369
+ E+++YT+++MIG Y + + LF M GV P+ +
Sbjct: 139 GMQERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVLPDAFLFPKILQACGNCEDLET 198
Query: 370 --------------------NVMIAGYIQNEGEDQALDLFHKMEKDGIIKRDTATWNALI 489
N ++ +++ A F M+ +RD +WN +I
Sbjct: 199 VKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMD-----ERDGVSWNVMI 253
Query: 490 SGHVQNGN 513
+G+ Q GN
Sbjct: 254 AGYCQKGN 261