BLASTX nr result

ID: Cnidium21_contig00038438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038438
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271937.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   295   2e-78
emb|CBI41066.3| unnamed protein product [Vitis vinifera]              295   2e-78
ref|XP_002525032.1| copine, putative [Ricinus communis] gi|22353...   286   9e-76
ref|XP_002315654.1| predicted protein [Populus trichocarpa] gi|2...   286   2e-75
gb|ABK24359.1| unknown [Picea sitchensis]                             285   2e-75

>ref|XP_002271937.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Vitis vinifera]
          Length = 420

 Score =  295 bits (756), Expect = 2e-78
 Identities = 140/171 (81%), Positives = 160/171 (93%)
 Frame = -2

Query: 515 GARSYQRRSLHHLGDSLNPYEQAISIIGRTLSAFDEDNLIPCYGFGDATTHDQDVFSFFS 336
           GARS+ R+SLHH+GDSLNPY+QAISIIGRTLSAFDEDNLIPCYGFGDATTHDQ+VFSFF 
Sbjct: 92  GARSFNRKSLHHVGDSLNPYQQAISIIGRTLSAFDEDNLIPCYGFGDATTHDQEVFSFFP 151

Query: 335 DDKPCTGFEEALTRYREIVPRIRLAGPTSFTPIIETAIGIVNETGGQYHVLLIIADGQVT 156
           DD+PC GFEE L+RY+E+VP+IRLAGPTSF PIIETAI IV+ +GGQYHVL+IIADGQVT
Sbjct: 152 DDRPCNGFEEVLSRYKELVPQIRLAGPTSFAPIIETAIEIVDTSGGQYHVLVIIADGQVT 211

Query: 155 RSVDTNPGQLSSQERSTIAAIVEASKYPLSIILVGVGDGPWDMMMQFDDNI 3
           RSVDT+ GQLS QE++TI AIV+AS+YPLSI+LVGVGDGPWD+M QFDDNI
Sbjct: 212 RSVDTHYGQLSRQEQNTINAIVKASEYPLSIVLVGVGDGPWDVMQQFDDNI 262


>emb|CBI41066.3| unnamed protein product [Vitis vinifera]
          Length = 415

 Score =  295 bits (756), Expect = 2e-78
 Identities = 140/171 (81%), Positives = 160/171 (93%)
 Frame = -2

Query: 515 GARSYQRRSLHHLGDSLNPYEQAISIIGRTLSAFDEDNLIPCYGFGDATTHDQDVFSFFS 336
           GARS+ R+SLHH+GDSLNPY+QAISIIGRTLSAFDEDNLIPCYGFGDATTHDQ+VFSFF 
Sbjct: 92  GARSFNRKSLHHVGDSLNPYQQAISIIGRTLSAFDEDNLIPCYGFGDATTHDQEVFSFFP 151

Query: 335 DDKPCTGFEEALTRYREIVPRIRLAGPTSFTPIIETAIGIVNETGGQYHVLLIIADGQVT 156
           DD+PC GFEE L+RY+E+VP+IRLAGPTSF PIIETAI IV+ +GGQYHVL+IIADGQVT
Sbjct: 152 DDRPCNGFEEVLSRYKELVPQIRLAGPTSFAPIIETAIEIVDTSGGQYHVLVIIADGQVT 211

Query: 155 RSVDTNPGQLSSQERSTIAAIVEASKYPLSIILVGVGDGPWDMMMQFDDNI 3
           RSVDT+ GQLS QE++TI AIV+AS+YPLSI+LVGVGDGPWD+M QFDDNI
Sbjct: 212 RSVDTHYGQLSRQEQNTINAIVKASEYPLSIVLVGVGDGPWDVMQQFDDNI 262


>ref|XP_002525032.1| copine, putative [Ricinus communis] gi|223535694|gb|EEF37359.1|
           copine, putative [Ricinus communis]
          Length = 398

 Score =  286 bits (733), Expect = 9e-76
 Identities = 136/171 (79%), Positives = 153/171 (89%)
 Frame = -2

Query: 515 GARSYQRRSLHHLGDSLNPYEQAISIIGRTLSAFDEDNLIPCYGFGDATTHDQDVFSFFS 336
           GARS+ R+SLHHLGD+ NPYEQAISIIGRT+S FDEDNLIPCYGFGDATTHDQ+VFSF  
Sbjct: 84  GARSFNRKSLHHLGDTPNPYEQAISIIGRTMSEFDEDNLIPCYGFGDATTHDQEVFSFHP 143

Query: 335 DDKPCTGFEEALTRYREIVPRIRLAGPTSFTPIIETAIGIVNETGGQYHVLLIIADGQVT 156
           DD PC GFEE L+RYR+I+P + LAGPTSF PIIETAIGIV+ +GGQYHVL+IIADGQVT
Sbjct: 144 DDHPCNGFEEVLSRYRDIIPNVNLAGPTSFAPIIETAIGIVDSSGGQYHVLMIIADGQVT 203

Query: 155 RSVDTNPGQLSSQERSTIAAIVEASKYPLSIILVGVGDGPWDMMMQFDDNI 3
           RSVDT   QLS QE+STI AIV+AS+YPLSI+LVGVGDGPWDMM +FDDNI
Sbjct: 204 RSVDTGYAQLSPQEQSTINAIVKASEYPLSIVLVGVGDGPWDMMHKFDDNI 254


>ref|XP_002315654.1| predicted protein [Populus trichocarpa] gi|222864694|gb|EEF01825.1|
           predicted protein [Populus trichocarpa]
          Length = 403

 Score =  286 bits (731), Expect = 2e-75
 Identities = 138/171 (80%), Positives = 151/171 (88%)
 Frame = -2

Query: 515 GARSYQRRSLHHLGDSLNPYEQAISIIGRTLSAFDEDNLIPCYGFGDATTHDQDVFSFFS 336
           GARS+ RRSLHH+G+  NPYEQAISIIGRTLSAFDEDNLIPCYGFGDA+THDQDVFSFF 
Sbjct: 69  GARSFNRRSLHHIGNGQNPYEQAISIIGRTLSAFDEDNLIPCYGFGDASTHDQDVFSFFP 128

Query: 335 DDKPCTGFEEALTRYREIVPRIRLAGPTSFTPIIETAIGIVNETGGQYHVLLIIADGQVT 156
           D++ C GFEE L +Y+EIVP +RLAGPTSF P+IE AI IV ++GGQYHVLLIIADGQVT
Sbjct: 129 DERFCNGFEEVLMQYKEIVPNLRLAGPTSFAPVIEMAITIVEQSGGQYHVLLIIADGQVT 188

Query: 155 RSVDTNPGQLSSQERSTIAAIVEASKYPLSIILVGVGDGPWDMMMQFDDNI 3
           RSVDT  GQLS QER TI AIV ASKYPLSIILVGVGDGPWDMM +FDDNI
Sbjct: 189 RSVDTQSGQLSPQERRTIDAIVRASKYPLSIILVGVGDGPWDMMREFDDNI 239


>gb|ABK24359.1| unknown [Picea sitchensis]
          Length = 423

 Score =  285 bits (730), Expect = 2e-75
 Identities = 137/171 (80%), Positives = 154/171 (90%)
 Frame = -2

Query: 515 GARSYQRRSLHHLGDSLNPYEQAISIIGRTLSAFDEDNLIPCYGFGDATTHDQDVFSFFS 336
           GARS+ RRSLHH+GD+ NPYEQAISIIGRTLSAFDEDNLIPC+GFGDA+THDQ VFSF+ 
Sbjct: 95  GARSFNRRSLHHIGDTPNPYEQAISIIGRTLSAFDEDNLIPCFGFGDASTHDQHVFSFYP 154

Query: 335 DDKPCTGFEEALTRYREIVPRIRLAGPTSFTPIIETAIGIVNETGGQYHVLLIIADGQVT 156
           DD+ C GFEEAL RYREIVP +RLAGPTSF P+IE AI IV ++GGQYHVLLIIADGQVT
Sbjct: 155 DDRLCNGFEEALRRYREIVPHLRLAGPTSFAPMIEGAIRIVEQSGGQYHVLLIIADGQVT 214

Query: 155 RSVDTNPGQLSSQERSTIAAIVEASKYPLSIILVGVGDGPWDMMMQFDDNI 3
           RSVD   GQLS+QE++T+ AIVEAS+YPLSI+LVGVGDGPWDMM QFDDNI
Sbjct: 215 RSVDIENGQLSTQEQNTVNAIVEASEYPLSIVLVGVGDGPWDMMRQFDDNI 265


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