BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038380
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]          71   8e-11
gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsi...    71   1e-10
gb|ABW81018.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...    68   7e-10
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]                64   1e-08
dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]                    62   4e-08

>emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]
          Length = 1455

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
 Frame = +3

Query: 3   TIKLPMTIGQGPREATQMLNFLVIKATS-TYNAILGRTGLHAFKAIASTYHMKVKFPTRN 179
           +I L M+ G+G    T+ + F +I A + TYN I GR  L  F+A+ S  H+KVKFP  N
Sbjct: 548 SIPLLMSWGRGHLRRTKEIRFWIINALAKTYNVICGRPSLCLFEAVPSVLHLKVKFPANN 607

Query: 180 GVGEERGDQKMARSCYVAALRADGVGGQV 266
           G+GE +G+Q  AR C +  + A   GG +
Sbjct: 608 GIGEVKGNQARARECRLNTMAAIEEGGDI 636


>gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 889

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/78 (46%), Positives = 50/78 (64%)
 Frame = +3

Query: 3   TIKLPMTIGQGPREATQMLNFLVIKATSTYNAILGRTGLHAFKAIASTYHMKVKFPTRNG 182
           TI+LP TI +G R+ T   NFLV+   + +NAILGR  LH  KA+ STYH  +KFP+  G
Sbjct: 125 TIQLP-TIARGVRQLT---NFLVVDKKAPFNAILGRPWLHVMKAVPSTYHQCIKFPSYKG 180

Query: 183 VGEERGDQKMARSCYVAA 236
           +    G Q+ +R CY+ +
Sbjct: 181 IAVVYGSQRSSRKCYMGS 198


>gb|ABW81018.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 672

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/80 (41%), Positives = 53/80 (66%)
 Frame = +3

Query: 3   TIKLPMTIGQGPREATQMLNFLVIKATSTYNAILGRTGLHAFKAIASTYHMKVKFPTRNG 182
           TIKLP+      ++ +++++F+V    + YN ILG   ++  KA+ STY+  +KFPT NG
Sbjct: 593 TIKLPVLA----KKVSKIVDFVVFDKPAAYNIILGTPWIYRMKAVPSTYYQCIKFPTSNG 648

Query: 183 VGEERGDQKMARSCYVAALR 242
           V   RGDQ+ +R+CY+A+ R
Sbjct: 649 VETIRGDQEASRTCYLASHR 668


>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
 Frame = +3

Query: 6   IKLPMTIGQGPREATQMLNFLVIKATSTYNAILGRTGLHAFKAIASTYHMKVKFPTRNG- 182
           I L  T G      T  + +L++ A ++YN +LGR  ++  KAI ST H+ +KFP+ NG 
Sbjct: 701 IDLYTTFGDDYLSKTINIRYLLVNANTSYNILLGRPSINRLKAIVSTPHLAMKFPSVNGD 760

Query: 183 VGEERGDQKMARSCYVAALRAD 248
           +     DQK AR CYVA+L+ +
Sbjct: 761 IATVHIDQKTARECYVASLKVE 782


>dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]
          Length = 1542

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/78 (38%), Positives = 46/78 (58%)
 Frame = +3

Query: 9   KLPMTIGQGPREATQMLNFLVIKATSTYNAILGRTGLHAFKAIASTYHMKVKFPTRNGVG 188
           +LP+T+G  P E   ML F+V++  S Y  ILGR  +   + + ST+++ +K+     VG
Sbjct: 614 ELPITVGSKPFERIVMLYFVVVEERSPYQMILGRPFIRISQCVISTHYLALKYRVNGVVG 673

Query: 189 EERGDQKMARSCYVAALR 242
             +G QKM RSCY  A +
Sbjct: 674 VVKGVQKMTRSCYATAAK 691