BLASTX nr result

ID: Cnidium21_contig00038370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038370
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270507.1| PREDICTED: uncharacterized protein LOC100261...    88   6e-16
ref|XP_002314376.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_003529560.1| PREDICTED: uncharacterized protein LOC100776...    83   2e-14
gb|ABK96257.1| unknown [Populus trichocarpa x Populus deltoides]       83   2e-14
ref|XP_003550346.1| PREDICTED: uncharacterized protein LOC100818...    83   3e-14

>ref|XP_002270507.1| PREDICTED: uncharacterized protein LOC100261891 [Vitis vinifera]
           gi|296083344|emb|CBI22980.3| unnamed protein product
           [Vitis vinifera]
          Length = 143

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 54/130 (41%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
 Frame = +3

Query: 132 MVGLSIVLESDQFXXXXXXXXXXXAQVINKVMTINK-----KPTXXXXXXXXXXXXXXXX 296
           MVGLSIVLE+ +             QVINK+  + K      P                 
Sbjct: 1   MVGLSIVLEAQK------GINKKTPQVINKITMMTKPTPFPSPPARWNSHSPLLPAATTF 54

Query: 297 LDQCFLCKRRLLPCRDIYMYQGDRAFCSEECRCTQIFMDEQNEMXXXXXXXXXXXXXXXI 476
           LD+CFLCK++LLP +DIYMY+GDRAFCS ECRC QIFMDE+  +                
Sbjct: 55  LDECFLCKQKLLPGKDIYMYKGDRAFCSVECRCRQIFMDEEETV---------------- 98

Query: 477 NNRREKCSLA 506
             RR+ CSLA
Sbjct: 99  --RRDNCSLA 106


>ref|XP_002314376.1| predicted protein [Populus trichocarpa] gi|222863416|gb|EEF00547.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 50/106 (47%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
 Frame = +3

Query: 132 MVGLSIVLESDQFXXXXXXXXXXXAQVINKV-MTINKKPTXXXXXXXXXXXXXXXX---- 296
           MVGLSIVLE+ +             QVINKV M IN KPT                    
Sbjct: 1   MVGLSIVLETPK--------SGSALQVINKVTMMINNKPTSPPGFSSSRNHSPRFSFPVP 52

Query: 297 --LDQCFLCKRRLLPCRDIYMYQGDRAFCSEECRCTQIFMDEQNEM 428
             LDQCF C ++LLP +DIYMY+GDR FCS ECRC QIF+DE+  +
Sbjct: 53  TFLDQCFFCGQKLLPGKDIYMYKGDRGFCSVECRCRQIFLDEEETL 98


>ref|XP_003529560.1| PREDICTED: uncharacterized protein LOC100776779 [Glycine max]
          Length = 135

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 53/129 (41%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
 Frame = +3

Query: 132 MVGLSIVLESDQFXXXXXXXXXXXAQVINK----VMTINKKPTXXXXXXXXXXXXXXXXL 299
           MVGLS+VLE+ +             QVINK    + +I+ KP+                L
Sbjct: 1   MVGLSVVLEAQK-----SCINKKTPQVINKTSMMLSSIHNKPSPPLPQPSSLFQPPTF-L 54

Query: 300 DQCFLCKRRLLPCRDIYMYQGDRAFCSEECRCTQIFMDEQNEMXXXXXXXXXXXXXXXIN 479
           DQCFLC +RLLP +DIYMY+GDRAFCS +CRC QIF DE+  +                 
Sbjct: 55  DQCFLCGKRLLPGKDIYMYKGDRAFCSVDCRCKQIFTDEEEAI----------------- 97

Query: 480 NRREKCSLA 506
            ++EKCSLA
Sbjct: 98  -QKEKCSLA 105


>gb|ABK96257.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 143

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 49/106 (46%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
 Frame = +3

Query: 132 MVGLSIVLESDQFXXXXXXXXXXXAQVINKV-MTINKKPTXXXXXXXXXXXXXXXX---- 296
           MVGLSIVLE+ +             QVINKV + IN KPT                    
Sbjct: 1   MVGLSIVLETPK--------SGSALQVINKVTLMINNKPTSPPSFSSSRNHSPRFSFPVP 52

Query: 297 --LDQCFLCKRRLLPCRDIYMYQGDRAFCSEECRCTQIFMDEQNEM 428
             LDQCF C ++LLP +DIYMY+GDR FCS ECRC QIF+DE+  +
Sbjct: 53  TFLDQCFFCGQKLLPGKDIYMYKGDRGFCSVECRCRQIFLDEEETL 98


>ref|XP_003550346.1| PREDICTED: uncharacterized protein LOC100818870 [Glycine max]
          Length = 133

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 53/130 (40%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
 Frame = +3

Query: 132 MVGLSIVLESDQFXXXXXXXXXXXAQVINK-----VMTINKKPTXXXXXXXXXXXXXXXX 296
           MVGLS+VLE+ +             QVINK     + +I+ KP+                
Sbjct: 1   MVGLSVVLEAQK-----SCINKKTPQVINKTTMLMLSSIHNKPSPQPSSLFQPPTF---- 51

Query: 297 LDQCFLCKRRLLPCRDIYMYQGDRAFCSEECRCTQIFMDEQNEMXXXXXXXXXXXXXXXI 476
           LDQCFLC +RLLP +DIYMY+GDRAFCS +CRC QIF DE+  +                
Sbjct: 52  LDQCFLCGKRLLPGKDIYMYKGDRAFCSVDCRCKQIFSDEEEAI---------------- 95

Query: 477 NNRREKCSLA 506
             ++EKCSLA
Sbjct: 96  --QKEKCSLA 103


Top