BLASTX nr result

ID: Cnidium21_contig00038357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038357
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155878.1| PREDICTED: pentatricopeptide repeat-containi...    55   8e-06
ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containi...    55   8e-06

>ref|XP_004155878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Cucumis sativus]
          Length = 561

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/38 (65%), Positives = 29/38 (76%)
 Frame = -2

Query: 422 NEVHEFTVVDKSHPKSVRIYQMINGLSQHLKKDGCTAN 309
           NEVHEFTV D+SHPKS  IYQ+INGL   LK+  C +N
Sbjct: 522 NEVHEFTVFDRSHPKSDNIYQVINGLRHELKQVECFSN 559


>ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Cucumis sativus]
          Length = 601

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/38 (65%), Positives = 29/38 (76%)
 Frame = -2

Query: 422 NEVHEFTVVDKSHPKSVRIYQMINGLSQHLKKDGCTAN 309
           NEVHEFTV D+SHPKS  IYQ+INGL   LK+  C +N
Sbjct: 562 NEVHEFTVFDRSHPKSDNIYQVINGLRHELKQVECFSN 599


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