BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038340
         (1627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|2...   377   e-102
ref|XP_002515265.1| pentatricopeptide repeat-containing protein,...   372   e-100
ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|2...   366   1e-98
ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containi...   364   4e-98
ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   357   7e-96

>ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|222861744|gb|EEE99286.1|
            predicted protein [Populus trichocarpa]
          Length = 473

 Score =  377 bits (968), Expect = e-102
 Identities = 194/408 (47%), Positives = 278/408 (68%), Gaps = 1/408 (0%)
 Frame = -3

Query: 1319 RKNLXPADYARQLDLISQVKGLSAAENYFNGLPESAKDISTYGALLNCYCREKLTDKAQT 1140
            +K      +A  LDLI++ +G++AAENYF+GL  S ++ ST+GALL+CYCRE +++KA T
Sbjct: 72   QKRKMNVSHAVYLDLIAKKEGIAAAENYFDGLSPSEQNHSTHGALLSCYCRELMSEKALT 131

Query: 1139 LFQKMDKLR-IVSSLAFNNLMSLYMRRHMPEAVIPLVQEMKNRKIPLTVHTYNIWMTSYS 963
            LF+KMDK++ +++SL FNNL+SL++R   PE V+P+VQEMK + +     TYN+WM SY 
Sbjct: 132  LFEKMDKMKFLLTSLPFNNLISLHLRLDQPEKVLPIVQEMKQKGVSPCTFTYNMWMQSYG 191

Query: 962  QMNDIEGVERVFEEMKVNNGEEQYNWTTYSNLAAAYVKAGHXXXXXXXXXXXXXETRNMG 783
             +ND EGVERV +EMK++ G++ ++WTTY+NLA  YVKAGH                   
Sbjct: 192  CLNDFEGVERVLDEMKMD-GQKNFSWTTYTNLATIYVKAGHFDKAESALKK----VEEQI 246

Query: 782  QRCDREPFHYLISLYAGTSNPVEVYRIWKHLKSSFRVTTNVSTLIMVQSLARLDDIDGFK 603
            +R  RE +H+LI+LYAGTSN  EV R+W  LKS+F  TTNVS L M+ +LA+L D++G  
Sbjct: 247  ERDYREAYHFLITLYAGTSNLGEVNRVWNSLKSNFHTTTNVSYLTMLHTLAKLKDVEGLL 306

Query: 602  KIFQEWESTCSSYDLRIAKAAILLYVKHGLISEAEDVFDNILKRCKGPFYQHGKPLILYY 423
            K F+EWES+C SYD+R+A  AI   ++H +  EA  +FD+ LKR +G F+   +  ++++
Sbjct: 307  KCFKEWESSCHSYDMRLANVAIRACLEHDMYEEAALIFDDALKRTEGLFFNAREMFMVFF 366

Query: 422  INKKQVDLALRCLEAAMSEVKDNEWHQIYEDVNRFVMENLKKERDVNGAEKCCRILKRVK 243
            +   Q+DLAL+ ++AA SEVK+ EW    + V+ F     + E+DVNGAE+ C+ILK + 
Sbjct: 367  LKNHQLDLALKHMKAAFSEVKEIEWQPEPKTVSAF-FAYFEDEKDVNGAERLCKILKHIN 425

Query: 242  PLGSEAYKLLLETYVAASKIAPEMRRRIMDDGXXXXXXXXXXLGRVCP 99
             L S AY LLL+TY+AA K+APEMR+R+ +DG          L RVCP
Sbjct: 426  RLDSNAYDLLLKTYIAAGKLAPEMRQRLEEDGIEINPELENLLERVCP 473



 Score = 93.6 bits (231), Expect = 1e-16
 Identities = 50/104 (48%), Positives = 69/104 (66%)
 Frame = -2

Query: 1617 RDVLYRKLSAPGSSKGSASETLNKIFGQGDFTNKFELDSCMLQLRRNGRVNQALEVMEWM 1438
            R  LY++LS  G+S  S S+TLN    +G  TNK +L +C+ +LR+ GR + A+EVMEWM
Sbjct: 12   RKRLYKRLSELGASGESVSKTLNDFVLEGGKTNKVDLLACIRELRKYGRFDYAIEVMEWM 71

Query: 1437 QTRNIKFQPTDHAKFLDLVSKVKGISAAENYFSGLPESAKEKST 1306
            Q R +      HA +LDL++K +GI+AAENYF GL  S +  ST
Sbjct: 72   QKRKMN---VSHAVYLDLIAKKEGIAAAENYFDGLSPSEQNHST 112


>ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545745|gb|EEF47249.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  372 bits (956), Expect = e-100
 Identities = 196/412 (47%), Positives = 275/412 (66%), Gaps = 2/412 (0%)
 Frame = -3

Query: 1325 QQRKNLXPADYARQLDLISQVKGLSAAENYFNGLPESAKDIST-YGALLNCYCREKLTDK 1149
            +++ N   AD A +LDLI + +G++AAE+YFNGL  SAK+  T YGALLNCYC+E ++DK
Sbjct: 98   KRKMNFSYADRAIRLDLIGKARGIAAAEDYFNGLSPSAKNHHTSYGALLNCYCKELMSDK 157

Query: 1148 AQTLFQKMDKLRIV-SSLAFNNLMSLYMRRHMPEAVIPLVQEMKNRKIPLTVHTYNIWMT 972
            A  LFQ+MD+ + + SSL FNNLMS+YMR   PE V PLV EMK RK+     TYNIWM 
Sbjct: 158  ALALFQEMDEKKFLYSSLPFNNLMSMYMRLGQPEKVPPLVDEMKKRKVSPCSFTYNIWMQ 217

Query: 971  SYSQMNDIEGVERVFEEMKVNNGEEQYNWTTYSNLAAAYVKAGHXXXXXXXXXXXXXETR 792
            SY  +ND +GV+RV  E+  + G++   WTTYSNLA  Y+KAG                 
Sbjct: 218  SYGCLNDFQGVDRVLREIVNDGGKDNLQWTTYSNLATIYLKAGIFEKAESALKKLEAI-- 275

Query: 791  NMGQRCDREPFHYLISLYAGTSNPVEVYRIWKHLKSSFRVTTNVSTLIMVQSLARLDDID 612
             MG R +RE +H+LIS+YAGT N  EV R+W  LKSSF +  N+S L+M+Q+LA+L D++
Sbjct: 276  -MGFR-NREAYHFLISIYAGTGNSNEVNRVWGLLKSSFNMINNLSYLVMLQALAKLKDVE 333

Query: 611  GFKKIFQEWESTCSSYDLRIAKAAILLYVKHGLISEAEDVFDNILKRCKGPFYQHGKPLI 432
            G  K F+EWES C++YD+RIA  AI ++++H +  EAE +FD+ LKR +GPF++  +  +
Sbjct: 334  GVAKCFREWESGCTNYDMRIANVAIRVFLQHDMYEEAELIFDDALKRTRGPFFKARERFM 393

Query: 431  LYYINKKQVDLALRCLEAAMSEVKDNEWHQIYEDVNRFVMENLKKERDVNGAEKCCRILK 252
            L+++   Q+DLAL+ + AA SE + +EW  + E VN +  +  + E+DV+GAEK  +ILK
Sbjct: 394  LFFLKIHQLDLALKHMRAAFSESEKHEWKPLQETVNAY-FDYFRTEKDVDGAEKLSKILK 452

Query: 251  RVKPLGSEAYKLLLETYVAASKIAPEMRRRIMDDGXXXXXXXXXXLGRVCPE 96
             +  L S  Y LLL+TY+AA K+APEMR+R+ +D           L  VCP+
Sbjct: 453  HINCLNSSVYSLLLKTYIAAGKLAPEMRQRLEEDNIEISDELEYLLESVCPK 504



 Score = 94.4 bits (233), Expect = 8e-17
 Identities = 48/101 (47%), Positives = 64/101 (63%)
 Frame = -2

Query: 1608 LYRKLSAPGSSKGSASETLNKIFGQGDFTNKFELDSCMLQLRRNGRVNQALEVMEWMQTR 1429
            LY KLSA G++ GS S TLN+   +G    K EL  C+ +LR+  R + A E+MEWM+ R
Sbjct: 40   LYHKLSALGATGGSVSRTLNEHIMEGKTITKIELSRCIRELRKYRRFDHAFEIMEWMEKR 99

Query: 1428 NIKFQPTDHAKFLDLVSKVKGISAAENYFSGLPESAKEKST 1306
             + F   D A  LDL+ K +GI+AAE+YF+GL  SAK   T
Sbjct: 100  KMNFSYADRAIRLDLIGKARGIAAAEDYFNGLSPSAKNHHT 140


>ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|222843242|gb|EEE80789.1|
            predicted protein [Populus trichocarpa]
          Length = 476

 Score =  366 bits (939), Expect = 1e-98
 Identities = 195/422 (46%), Positives = 276/422 (65%), Gaps = 12/422 (2%)
 Frame = -3

Query: 1325 QQRK-NLXPADYARQLDLISQVKGLSAAENYFNGLPESAKDISTYGALLNCYCREKLTDK 1149
            Q+RK N    D+A  LDL ++ KG++AAENYF+ LP S ++  TY  LLNCYC+E +++K
Sbjct: 58   QKRKMNFSHVDHAVYLDLTAKTKGIAAAENYFDNLPPSVQNHVTYSTLLNCYCKELMSEK 117

Query: 1148 AQTLFQKMDKLRIVS-SLAFNNLMSLYMRRHMPEAVIPLVQEMKNRKIPLTVHTYNIWMT 972
            A TLF+KMDK++++S S+ FNNLM+L+MR   PE V+ +VQEMK R +     TYNIWM 
Sbjct: 118  ALTLFEKMDKMKLLSTSMPFNNLMTLHMRLGQPEKVLGIVQEMKQRGVSPGTFTYNIWMQ 177

Query: 971  SYSQMNDIEGVERVFEEMKVNNGEEQYNWTTYSNLAAAYVKAGHXXXXXXXXXXXXXETR 792
            SY  +ND EGV+RV +EMK + G+E ++WTTYSNLA  YVKAG              +  
Sbjct: 178  SYGCLNDFEGVQRVLDEMKTD-GKENFSWTTYSNLATIYVKAGLFDKAESALRKLEEQIE 236

Query: 791  NMGQRCD----------REPFHYLISLYAGTSNPVEVYRIWKHLKSSFRVTTNVSTLIMV 642
              G+ CD          RE +H+LISLYAGTSN  EV+R+W  LKSSFR TTN+S L ++
Sbjct: 237  -CGRDCDFQKKRRHDADREAYHFLISLYAGTSNLSEVHRVWNSLKSSFRTTTNISYLNVL 295

Query: 641  QSLARLDDIDGFKKIFQEWESTCSSYDLRIAKAAILLYVKHGLISEAEDVFDNILKRCKG 462
            Q+LA+L D++G  K F+EWES+C SYD+ +A  AI   ++H +  EA  +FD  LKR KG
Sbjct: 296  QALAKLKDVEGILKCFKEWESSCHSYDMGLANVAIRACLEHDMYEEAASIFDEALKRTKG 355

Query: 461  PFYQHGKPLILYYINKKQVDLALRCLEAAMSEVKDNEWHQIYEDVNRFVMENLKKERDVN 282
             F++  +  +++++   Q DLAL+ ++AA SE K+ EW    + V+ F +   +  +DV+
Sbjct: 356  LFFKAREMFMVFFLKNHQPDLALKHMKAAFSEAKEIEWQPDQKTVSAF-LNYFEDGKDVD 414

Query: 281  GAEKCCRILKRVKPLGSEAYKLLLETYVAASKIAPEMRRRIMDDGXXXXXXXXXXLGRVC 102
            GAE+ C+I K++  L S AY LLL+TY AA ++APEMR+R+ +D           L RV 
Sbjct: 415  GAERLCKIWKQINRLNSNAYILLLKTYTAAGRLAPEMRQRLEEDNIEINPELENLLERVS 474

Query: 101  PE 96
            P+
Sbjct: 475  PK 476



 Score =  106 bits (265), Expect = 2e-20
 Identities = 51/101 (50%), Positives = 70/101 (69%)
 Frame = -2

Query: 1608 LYRKLSAPGSSKGSASETLNKIFGQGDFTNKFELDSCMLQLRRNGRVNQALEVMEWMQTR 1429
            +YR+LS  G+S GS S+TLN++  +G  T+K  L +C+ +LR+ GR + A+EVMEWMQ R
Sbjct: 1    MYRRLSELGASGGSVSKTLNELILEGGKTSKINLTTCIKKLRKYGRFDHAIEVMEWMQKR 60

Query: 1428 NIKFQPTDHAKFLDLVSKVKGISAAENYFSGLPESAKEKST 1306
             + F   DHA +LDL +K KGI+AAENYF  LP S +   T
Sbjct: 61   KMNFSHVDHAVYLDLTAKTKGIAAAENYFDNLPPSVQNHVT 101


>ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
            mitochondrial-like [Cucumis sativus]
            gi|449518825|ref|XP_004166436.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g02370,
            mitochondrial-like [Cucumis sativus]
          Length = 474

 Score =  364 bits (934), Expect = 4e-98
 Identities = 192/401 (47%), Positives = 263/401 (65%)
 Frame = -3

Query: 1298 DYARQLDLISQVKGLSAAENYFNGLPESAKDISTYGALLNCYCREKLTDKAQTLFQKMDK 1119
            DYA +LDLIS+V G++AAE YF  LP SAK+  TYGALLNCYC+E + +KA TLF+KMD+
Sbjct: 78   DYALRLDLISKVNGVTAAEKYFYDLPPSAKNRCTYGALLNCYCKEMMEEKALTLFKKMDE 137

Query: 1118 LRIVSSLAFNNLMSLYMRRHMPEAVIPLVQEMKNRKIPLTVHTYNIWMTSYSQMNDIEGV 939
            L+I +SL+FNNLM++YMR   PE V PL+ EMK R   LT  TYN+WM S + +NDI  V
Sbjct: 138  LKISTSLSFNNLMTMYMRMDHPEKVPPLIGEMKQRGFYLTTFTYNVWMNSCASLNDIGKV 197

Query: 938  ERVFEEMKVNNGEEQYNWTTYSNLAAAYVKAGHXXXXXXXXXXXXXETRNMGQRCDREPF 759
            E + EEMK+ +   +++WTTYSNLA+ YVKAG              E ++   + DR  +
Sbjct: 198  EEILEEMKMED-RNKFDWTTYSNLASFYVKAGQFEKAELALKKLEEEMKS--DKNDRLVY 254

Query: 758  HYLISLYAGTSNPVEVYRIWKHLKSSFRVTTNVSTLIMVQSLARLDDIDGFKKIFQEWES 579
            H LISLYA TSN  EV RIW  LKS +   TN+S L+M+Q+L +L DI+G K+ ++EWES
Sbjct: 255  HCLISLYASTSNLSEVNRIWNALKSVYSTMTNISYLVMLQALRKLKDIEGLKRTYKEWES 314

Query: 578  TCSSYDLRIAKAAILLYVKHGLISEAEDVFDNILKRCKGPFYQHGKPLILYYINKKQVDL 399
             C ++DLRI    I  Y++  +  +A  +F++  KR KGPF +  +  ++Y++  KQVD 
Sbjct: 315  NCRNFDLRIVNDIIGAYLQQDMYEDAAMIFEDATKRSKGPFSRAREMFMVYFLKLKQVDS 374

Query: 398  ALRCLEAAMSEVKDNEWHQIYEDVNRFVMENLKKERDVNGAEKCCRILKRVKPLGSEAYK 219
            A   LE+A+SE K+ EWH        F +   ++E+DV GAE   RILKR+K L +  Y 
Sbjct: 375  AFSHLESALSESKEKEWHPSLATTTAF-LNYFEEEKDVEGAEDFARILKRLKCLDASGYH 433

Query: 218  LLLETYVAASKIAPEMRRRIMDDGXXXXXXXXXXLGRVCPE 96
            LLL+TYVAA K+AP+MR+R+ +D           LG VCP+
Sbjct: 434  LLLKTYVAAGKLAPDMRKRLKEDDIEISSELEELLGTVCPQ 474



 Score =  102 bits (255), Expect = 2e-19
 Identities = 48/105 (45%), Positives = 73/105 (69%)
 Frame = -2

Query: 1620 NRDVLYRKLSAPGSSKGSASETLNKIFGQGDFTNKFELDSCMLQLRRNGRVNQALEVMEW 1441
            N+  LY +LSA G++ GS ++T+N+   +G+   K+EL+ C+ +LR+  R +  L++MEW
Sbjct: 7    NQRGLYPRLSALGATGGSVAKTINQFIMEGNIVKKYELEKCIKELRKYRRYHHCLQIMEW 66

Query: 1440 MQTRNIKFQPTDHAKFLDLVSKVKGISAAENYFSGLPESAKEKST 1306
            M+TR I +  TD+A  LDL+SKV G++AAE YF  LP SAK + T
Sbjct: 67   METRKINYSFTDYALRLDLISKVNGVTAAEKYFYDLPPSAKNRCT 111


>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g02370, mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  357 bits (915), Expect = 7e-96
 Identities = 191/385 (49%), Positives = 256/385 (66%), Gaps = 1/385 (0%)
 Frame = -3

Query: 1301 ADYARQLDLISQVKGLSAAENYFNGLPESAKDISTYGALLNCYCREKLTDKAQTLFQKMD 1122
            ADYA +LDL+S+ KGL+ AE YFN L  SAK++ TYG LLNCYC+EK+ +KA  LF+KMD
Sbjct: 112  ADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKALALFEKMD 171

Query: 1121 KLRIVS-SLAFNNLMSLYMRRHMPEAVIPLVQEMKNRKIPLTVHTYNIWMTSYSQMNDIE 945
            +L   S SL FNNLMSL+MR   PE V PLV EMK R I     TYNI M SY+++NDIE
Sbjct: 172  ELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSYARLNDIE 231

Query: 944  GVERVFEEMKVNNGEEQYNWTTYSNLAAAYVKAGHXXXXXXXXXXXXXETRNMGQRCDRE 765
            G ERV EE+K  N E++ +WTTYSNLAA YV A                   MG   DR 
Sbjct: 232  GAERVLEEIKREN-EDKLSWTTYSNLAAVYVNA---RLFEKAELALKKLEEEMGFH-DRL 286

Query: 764  PFHYLISLYAGTSNPVEVYRIWKHLKSSFRVTTNVSTLIMVQSLARLDDIDGFKKIFQEW 585
             +H+LISLYAG +N  EV R+W  LKS+F  T N+S  IM+Q+LA L+D+DG K  F+EW
Sbjct: 287  AYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEW 346

Query: 584  ESTCSSYDLRIAKAAILLYVKHGLISEAEDVFDNILKRCKGPFYQHGKPLILYYINKKQV 405
            +S+C S+D+R+A  A+  ++   +I +AE +    +KR  GPFY      + +++  +++
Sbjct: 347  KSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAHHLKVREI 406

Query: 404  DLALRCLEAAMSEVKDNEWHQIYEDVNRFVMENLKKERDVNGAEKCCRILKRVKPLGSEA 225
            D AL+ +EAA SEVK+NEW    E V  F ++  ++E+DV GAEK C+ILK +  L S A
Sbjct: 407  DTALKYMEAAASEVKNNEWQPAPERVLAF-LKYFEEEKDVEGAEKFCKILKNISGLDSNA 465

Query: 224  YKLLLETYVAASKIAPEMRRRIMDD 150
            Y+LLL+T VAA +  PEMR+R+ +D
Sbjct: 466  YQLLLQTXVAAGRTEPEMRKRMKED 490



 Score = 92.0 bits (227), Expect = 4e-16
 Identities = 47/101 (46%), Positives = 65/101 (64%)
 Frame = -2

Query: 1608 LYRKLSAPGSSKGSASETLNKIFGQGDFTNKFELDSCMLQLRRNGRVNQALEVMEWMQTR 1429
            LY +LSA G++ GS ++TLN+   +G    K EL SC+ QLR+  +   ALE+M+WM+ R
Sbjct: 46   LYHRLSALGATGGSVADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMDWMENR 105

Query: 1428 NIKFQPTDHAKFLDLVSKVKGISAAENYFSGLPESAKEKST 1306
             I F   D+A  LDL+SK KG++ AE YF+ L  SAK   T
Sbjct: 106  KIFFSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLT 146