BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038317
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278909.1| PREDICTED: pentatricopeptide repeat-containi...   171   5e-41
ref|XP_003540386.1| PREDICTED: pentatricopeptide repeat-containi...   151   5e-35
ref|NP_563765.1| pentatricopeptide repeat-containing protein [Ar...   150   9e-35
ref|XP_002892331.1| pentatricopeptide repeat-containing protein ...   150   1e-34
ref|XP_004139374.1| PREDICTED: pentatricopeptide repeat-containi...   148   4e-34

>ref|XP_002278909.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06270
           [Vitis vinifera] gi|302143379|emb|CBI21940.3| unnamed
           protein product [Vitis vinifera]
          Length = 343

 Score =  171 bits (434), Expect = 5e-41
 Identities = 85/125 (68%), Positives = 102/125 (81%), Gaps = 1/125 (0%)
 Frame = +3

Query: 3   IRRINVVVELVKEMV-KFGLTPRQEIVVKVIAAMRARKDVWRAVEIVELLQSEDILVGFE 179
           +RR     EL+KEMV K GLTPRQ  V+ ++AA+RA+K++W+AVE++E L+ ED   GF 
Sbjct: 219 MRRTTDATELMKEMVAKIGLTPRQGTVLNLVAALRAKKEIWKAVEMIEFLEGEDFNAGFA 278

Query: 180 SYESVLEGCLECGEYVLAGKVVMGMTNRGFIPYIRARQKVVEGLANAGDWKLAYAVRQRF 359
           SYESVLEGCL C E+VLAGKVVMGMT RGFIPYI  RQKVVEGLAN G+WKLA AVRQRF
Sbjct: 279 SYESVLEGCLACHEFVLAGKVVMGMTARGFIPYIGVRQKVVEGLANLGEWKLALAVRQRF 338

Query: 360 AELKS 374
           A+L+S
Sbjct: 339 ADLRS 343


>ref|XP_003540386.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06270-like [Glycine max]
          Length = 342

 Score =  151 bits (382), Expect = 5e-35
 Identities = 74/125 (59%), Positives = 98/125 (78%), Gaps = 1/125 (0%)
 Frame = +3

Query: 3   IRRINVVVELVKEMV-KFGLTPRQEIVVKVIAAMRARKDVWRAVEIVELLQSEDILVGFE 179
           +R+    ++L+K+MV ++GLTP Q  +VK++AA+RA +++W+AVE++E L+ E   VGFE
Sbjct: 218 VRKTAKALDLMKQMVVQYGLTPGQGTLVKLLAALRANREIWKAVEMIEFLEKEGNSVGFE 277

Query: 180 SYESVLEGCLECGEYVLAGKVVMGMTNRGFIPYIRARQKVVEGLANAGDWKLAYAVRQRF 359
           SYE V+EGCLE  EYVLA KV  GMT RGFIPYIR RQK++EGLA+  +W LA AVRQRF
Sbjct: 278 SYELVIEGCLEKREYVLAAKVATGMTERGFIPYIRVRQKIIEGLASIDEWNLACAVRQRF 337

Query: 360 AELKS 374
           A LKS
Sbjct: 338 AALKS 342


>ref|NP_563765.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75264068|sp|Q9LNC0.1|PPR16_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g06270 gi|8844132|gb|AAF80224.1|AC025290_13 Contains
           similarity to an unknown protein F23N19.4 gi|6630464
           from Arabidopsis thaliana gb|AC007190 and contains
           multiple PPR PF|01535 repeats. EST gb|T44174 comes from
           this gene [Arabidopsis thaliana]
           gi|17529194|gb|AAL38823.1| unknown protein [Arabidopsis
           thaliana] gi|20465473|gb|AAM20196.1| unknown protein
           [Arabidopsis thaliana] gi|21536601|gb|AAM60933.1|
           unknown [Arabidopsis thaliana]
           gi|332189849|gb|AEE27970.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 343

 Score =  150 bits (380), Expect = 9e-35
 Identities = 74/124 (59%), Positives = 99/124 (79%), Gaps = 1/124 (0%)
 Frame = +3

Query: 6   RRINVVVELVKEMV-KFGLTPRQEIVVKVIAAMRARKDVWRAVEIVELLQSEDILVGFES 182
           R+   VV++VKEMV K G++PR+ ++ KV AA+RA +++W+A+E++E ++S D  V FES
Sbjct: 220 RKTTDVVKIVKEMVSKAGISPRKGMLTKVAAALRANREIWKAIEMIEFVESRDYPVEFES 279

Query: 183 YESVLEGCLECGEYVLAGKVVMGMTNRGFIPYIRARQKVVEGLANAGDWKLAYAVRQRFA 362
           YE V+EGCLE  EY+LAGKVVM MT+RGFIPYI+ RQKVVE L N G+WKLA  VRQR +
Sbjct: 280 YEVVVEGCLEVREYILAGKVVMRMTDRGFIPYIKVRQKVVERLINIGEWKLACTVRQRVS 339

Query: 363 ELKS 374
           EL+S
Sbjct: 340 ELRS 343


>ref|XP_002892331.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338173|gb|EFH68590.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 343

 Score =  150 bits (379), Expect = 1e-34
 Identities = 73/124 (58%), Positives = 100/124 (80%), Gaps = 1/124 (0%)
 Frame = +3

Query: 6   RRINVVVELVKEMV-KFGLTPRQEIVVKVIAAMRARKDVWRAVEIVELLQSEDILVGFES 182
           R+ N VV++VKEMV K G++PR+ ++ KV AA+RA +++W+A+E++E ++S D  V FES
Sbjct: 220 RKTNDVVKIVKEMVSKAGISPRKGMLTKVAAALRANREIWKAIEMIEFVESRDYPVEFES 279

Query: 183 YESVLEGCLECGEYVLAGKVVMGMTNRGFIPYIRARQKVVEGLANAGDWKLAYAVRQRFA 362
           YE V+EGCLE  EY+LAGK+VM MT+RGFIPYI+ RQKVVE L + G+WKLA  VRQR +
Sbjct: 280 YEVVVEGCLEVREYILAGKMVMRMTDRGFIPYIKVRQKVVERLISIGEWKLACTVRQRLS 339

Query: 363 ELKS 374
           EL+S
Sbjct: 340 ELRS 343


>ref|XP_004139374.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06270-like [Cucumis sativus]
           gi|449483078|ref|XP_004156487.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g06270-like [Cucumis sativus]
          Length = 343

 Score =  148 bits (374), Expect = 4e-34
 Identities = 77/125 (61%), Positives = 97/125 (77%), Gaps = 1/125 (0%)
 Frame = +3

Query: 3   IRRINVVVELVKEMV-KFGLTPRQEIVVKVIAAMRARKDVWRAVEIVELLQSEDILVGFE 179
           +RR +  VEL+KEMV K  L PRQ  +  V+AA+R  ++V RAVEI+ELL+ +   VGFE
Sbjct: 219 VRRTDKAVELLKEMVVKVKLMPRQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFE 278

Query: 180 SYESVLEGCLECGEYVLAGKVVMGMTNRGFIPYIRARQKVVEGLANAGDWKLAYAVRQRF 359
           SYE ++EGCLEC EY+LAGKV MGMT+RGFIPYI+ RQ+VVEGLA  G+ +LA AVR+RF
Sbjct: 279 SYELLVEGCLECREYILAGKVTMGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRF 338

Query: 360 AELKS 374
            EL S
Sbjct: 339 VELGS 343