BLASTX nr result
ID: Cnidium21_contig00038284
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00038284
(648 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containi... 343 1e-92
emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera] 340 2e-91
emb|CBI22375.3| unnamed protein product [Vitis vinifera] 336 3e-90
ref|XP_002521980.1| pentatricopeptide repeat-containing protein,... 335 3e-90
ref|XP_003590960.1| Pentatricopeptide repeat-containing protein ... 316 3e-84
>ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 343 bits (881), Expect = 1e-92
Identities = 165/215 (76%), Positives = 194/215 (90%)
Frame = +1
Query: 1 KVRVSTDSTLTHLHSHNFQESHLVKLLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTK 180
KV VS ++ HL S++F+E+HL+KLLNRSCKAGK+NESLYFLECLVN+GY PDVILCTK
Sbjct: 49 KVGVSAEARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTK 108
Query: 181 LIKGFFNSKNVEKATRVMEILESKGDPDIFAYNALISGFCKLNRIEPANRVLERMRDRGF 360
LIKGFFN KN+EKA+RVMEILES +PD+FAYNA+ISGFCK+NRIE A +VL RM+ RGF
Sbjct: 109 LIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGF 168
Query: 361 FPDVVTYNIMIGSLCSRGRLDLALKMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMK 540
PD+VTYNIMIGSLC+R +L LALK++DQLL DNCMPTVITYTILIEATI++GGI+EAMK
Sbjct: 169 LPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMK 228
Query: 541 LLDEMLIRGLQPDMYTYNALIRGMCREGMIERAFE 645
LL+EML RGL PDMYTYNA+IRGMC+EGM+ERA E
Sbjct: 229 LLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAE 263
Score = 116 bits (291), Expect = 3e-24
Identities = 61/191 (31%), Positives = 103/191 (53%), Gaps = 1/191 (0%)
Frame = +1
Query: 76 LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
L+ + G NE++ LE ++ RG PD+ +I+G VE+A ++ L SKG
Sbjct: 213 LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKG 272
Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
PD+ +YN L+ F + + +++ M RG P+ VTY+I+I SLC GR+D A+
Sbjct: 273 CKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAI 332
Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
++ ++E P +Y LI A +G +D A+ ++D M+ G PD+ YN ++ +
Sbjct: 333 SVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAAL 392
Query: 613 CREGMIERAFE 645
C+ G +A E
Sbjct: 393 CKNGNANQALE 403
Score = 116 bits (290), Expect = 4e-24
Identities = 61/224 (27%), Positives = 114/224 (50%), Gaps = 36/224 (16%)
Frame = +1
Query: 76 LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
++ CK G + + L ++G KPDVI L++ F N ++ +++ + S+G
Sbjct: 248 IIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 307
Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
+P+ Y+ LIS C+ RI+ A VL+ M ++ PD +Y+ +I +LC GRLDLA+
Sbjct: 308 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 367
Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDE-------------------- 552
+MD ++ + C+P ++ Y ++ A +G ++A+++ ++
Sbjct: 368 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 427
Query: 553 ---------------MLIRGLQPDMYTYNALIRGMCREGMIERA 639
M+ +G+ PD TYN+LI +CR+G++E A
Sbjct: 428 WSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEA 471
Score = 114 bits (285), Expect = 2e-23
Identities = 60/189 (31%), Positives = 107/189 (56%), Gaps = 1/189 (0%)
Frame = +1
Query: 76 LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
++ C K +L L+ L+ P VI T LI+ + +A +++E + ++G
Sbjct: 178 MIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG 237
Query: 256 D-PDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
PD++ YNA+I G CK +E A ++ + +G PDV++YNI++ + ++G+ D
Sbjct: 238 LLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGE 297
Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
K++ ++ C P +TY+ILI + G IDEA+ +L M+ + L PD Y+Y+ LI +
Sbjct: 298 KLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISAL 357
Query: 613 CREGMIERA 639
C+EG ++ A
Sbjct: 358 CKEGRLDLA 366
Score = 101 bits (251), Expect = 1e-19
Identities = 57/189 (30%), Positives = 97/189 (51%), Gaps = 1/189 (0%)
Frame = +1
Query: 76 LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
L++ C+ G+ +E++ L+ ++ + PD LI ++ A +M+ + S G
Sbjct: 318 LISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 377
Query: 256 D-PDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
PDI YN +++ CK A + ++R G P+V +YN MI +L S G AL
Sbjct: 378 CLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRAL 437
Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
M+ ++ P ITY LI DG ++EA+ LLD+M G +P + +YN ++ G+
Sbjct: 438 GMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGL 497
Query: 613 CREGMIERA 639
C+ I+ A
Sbjct: 498 CKVRRIDDA 506
Score = 92.4 bits (228), Expect = 6e-17
Identities = 55/164 (33%), Positives = 85/164 (51%), Gaps = 1/164 (0%)
Frame = +1
Query: 76 LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
+L CK G N++L L G P+V +I ++ + +A ++ + SKG
Sbjct: 388 ILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 447
Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
DPD YN+LIS C+ +E A +L+ M GF P V++YNI++ LC R+D A+
Sbjct: 448 VDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAI 507
Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIR 564
M +++E C P TY +LIE G EAM+L + + R
Sbjct: 508 GMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR 551
Score = 90.5 bits (223), Expect = 2e-16
Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Frame = +1
Query: 76 LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
L++ CK G+ + ++ ++ +++ G PD++ ++ + N +A + L G
Sbjct: 353 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 412
Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
P++ +YN +IS A ++ M +G PD +TYN +I LC G ++ A+
Sbjct: 413 CPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAI 472
Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
++D + + PTVI+Y I++ ID+A+ + EM+ +G +P+ TY LI G+
Sbjct: 473 GLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 532
Query: 613 CREGMIERAFE 645
G A E
Sbjct: 533 GFAGWRTEAME 543
>emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 340 bits (871), Expect = 2e-91
Identities = 163/215 (75%), Positives = 193/215 (89%)
Frame = +1
Query: 1 KVRVSTDSTLTHLHSHNFQESHLVKLLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTK 180
KV VS ++ HL S++F+E+HL+KLLNRSCKAGK+NESLYFLECLVN+GY PDVILCTK
Sbjct: 59 KVGVSAEARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTK 118
Query: 181 LIKGFFNSKNVEKATRVMEILESKGDPDIFAYNALISGFCKLNRIEPANRVLERMRDRGF 360
LIKGFFN KN+EKA+RVMEILES +PD+FAYNA+ISGFCK+N+IE A +VL RM+ RGF
Sbjct: 119 LIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGF 178
Query: 361 FPDVVTYNIMIGSLCSRGRLDLALKMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMK 540
PD+VTYNIMIGSLC+R +L LAL ++DQLL DNCMPTVITYTILIEATI++GGI+EAMK
Sbjct: 179 LPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMK 238
Query: 541 LLDEMLIRGLQPDMYTYNALIRGMCREGMIERAFE 645
LL+EML RGL PDMYTYNA+IRGMC+EGM+ERA E
Sbjct: 239 LLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAE 273
Score = 117 bits (294), Expect = 1e-24
Identities = 61/191 (31%), Positives = 104/191 (54%), Gaps = 1/191 (0%)
Frame = +1
Query: 76 LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
L+ + G NE++ LE ++ RG PD+ +I+G VE+A ++ L SKG
Sbjct: 223 LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKG 282
Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
+PD+ +YN L+ F + + +++ M RG P+ VTY+I+I SLC GR+D A+
Sbjct: 283 CEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAI 342
Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
++ ++E P +Y LI A +G +D A+ ++D M+ G PD+ YN ++ +
Sbjct: 343 SVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAAL 402
Query: 613 CREGMIERAFE 645
C+ G +A E
Sbjct: 403 CKNGNANQALE 413
Score = 115 bits (287), Expect = 9e-24
Identities = 60/224 (26%), Positives = 114/224 (50%), Gaps = 36/224 (16%)
Frame = +1
Query: 76 LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
++ CK G + + L ++G +PDVI L++ F N ++ +++ + S+G
Sbjct: 258 IIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 317
Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
+P+ Y+ LIS C+ RI+ A VL+ M ++ PD +Y+ +I +LC GRLDLA+
Sbjct: 318 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 377
Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDE-------------------- 552
+MD ++ + C+P ++ Y ++ A +G ++A+++ ++
Sbjct: 378 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 437
Query: 553 ---------------MLIRGLQPDMYTYNALIRGMCREGMIERA 639
M+ +G+ PD TYN+LI +CR+G++E A
Sbjct: 438 WSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEA 481
Score = 114 bits (285), Expect = 2e-23
Identities = 60/189 (31%), Positives = 107/189 (56%), Gaps = 1/189 (0%)
Frame = +1
Query: 76 LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
++ C K +L L+ L+ P VI T LI+ + +A +++E + ++G
Sbjct: 188 MIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG 247
Query: 256 D-PDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
PD++ YNA+I G CK +E A ++ + +G PDV++YNI++ + ++G+ D
Sbjct: 248 LLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGE 307
Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
K++ ++ C P +TY+ILI + G IDEA+ +L M+ + L PD Y+Y+ LI +
Sbjct: 308 KLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISAL 367
Query: 613 CREGMIERA 639
C+EG ++ A
Sbjct: 368 CKEGRLDLA 376
Score = 101 bits (251), Expect = 1e-19
Identities = 57/189 (30%), Positives = 97/189 (51%), Gaps = 1/189 (0%)
Frame = +1
Query: 76 LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
L++ C+ G+ +E++ L+ ++ + PD LI ++ A +M+ + S G
Sbjct: 328 LISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 387
Query: 256 D-PDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
PDI YN +++ CK A + ++R G P+V +YN MI +L S G AL
Sbjct: 388 CLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRAL 447
Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
M+ ++ P ITY LI DG ++EA+ LLD+M G +P + +YN ++ G+
Sbjct: 448 GMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGL 507
Query: 613 CREGMIERA 639
C+ I+ A
Sbjct: 508 CKVRRIDDA 516
Score = 92.4 bits (228), Expect = 6e-17
Identities = 55/164 (33%), Positives = 85/164 (51%), Gaps = 1/164 (0%)
Frame = +1
Query: 76 LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
+L CK G N++L L G P+V +I ++ + +A ++ + SKG
Sbjct: 398 ILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 457
Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
DPD YN+LIS C+ +E A +L+ M GF P V++YNI++ LC R+D A+
Sbjct: 458 IDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAI 517
Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIR 564
M +++E C P TY +LIE G EAM+L + + R
Sbjct: 518 GMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR 561
Score = 90.9 bits (224), Expect = 2e-16
Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Frame = +1
Query: 76 LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
L++ CK G+ + ++ ++ +++ G PD++ ++ + N +A + L G
Sbjct: 363 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 422
Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
P++ +YN +IS A ++ M +G PD +TYN +I LC G ++ A+
Sbjct: 423 CPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAI 482
Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
++D + + PTVI+Y I++ ID+A+ + EM+ +G +P+ TY LI G+
Sbjct: 483 GLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 542
Query: 613 CREGMIERAFE 645
G A E
Sbjct: 543 GFAGWRTEAME 553
>emb|CBI22375.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 336 bits (861), Expect = 3e-90
Identities = 161/209 (77%), Positives = 189/209 (90%)
Frame = +1
Query: 1 KVRVSTDSTLTHLHSHNFQESHLVKLLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTK 180
KV VS ++ HL S++F+E+HL+KLLNRSCKAGK+NESLYFLECLVN+GY PDVILCTK
Sbjct: 49 KVGVSAEARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTK 108
Query: 181 LIKGFFNSKNVEKATRVMEILESKGDPDIFAYNALISGFCKLNRIEPANRVLERMRDRGF 360
LIKGFFN KN+EKA+RVMEILES +PD+FAYNA+ISGFCK+NRIE A +VL RM+ RGF
Sbjct: 109 LIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGF 168
Query: 361 FPDVVTYNIMIGSLCSRGRLDLALKMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMK 540
PD+VTYNIMIGSLC+R +L LALK++DQLL DNCMPTVITYTILIEATI++GGI+EAMK
Sbjct: 169 LPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMK 228
Query: 541 LLDEMLIRGLQPDMYTYNALIRGMCREGM 627
LL+EML RGL PDMYTYNA+IRGMC+EGM
Sbjct: 229 LLEEMLARGLLPDMYTYNAIIRGMCKEGM 257
Score = 108 bits (271), Expect = 7e-22
Identities = 59/191 (30%), Positives = 102/191 (53%), Gaps = 1/191 (0%)
Frame = +1
Query: 76 LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
++ C K +L L+ L+ P VI T LI+ + +A +++E + ++G
Sbjct: 178 MIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG 237
Query: 256 D-PDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
PD++ YNA+I G CK + +++ M RG P+ VTY+I+I SLC GR+D A+
Sbjct: 238 LLPDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAI 297
Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
++ ++E P +Y LI A +G +D A+ ++D M+ G PD+ YN ++ +
Sbjct: 298 SVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAAL 357
Query: 613 CREGMIERAFE 645
C+ G +A E
Sbjct: 358 CKNGNANQALE 368
Score = 97.8 bits (242), Expect = 2e-18
Identities = 48/169 (28%), Positives = 96/169 (56%), Gaps = 1/169 (0%)
Frame = +1
Query: 76 LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
L+ + G NE++ LE ++ RG PD+ +I+G ++ +++ + S+G
Sbjct: 213 LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSRG 272
Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
+P+ Y+ LIS C+ RI+ A VL+ M ++ PD +Y+ +I +LC GRLDLA+
Sbjct: 273 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 332
Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPD 579
+MD ++ + C+P ++ Y ++ A +G ++A+++ +++ G P+
Sbjct: 333 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPN 381
>ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538784|gb|EEF40384.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 584
Score = 335 bits (860), Expect = 3e-90
Identities = 161/215 (74%), Positives = 191/215 (88%)
Frame = +1
Query: 1 KVRVSTDSTLTHLHSHNFQESHLVKLLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTK 180
KVRVS ++ TH+ S +F+E HL+KLLNRSC+AGKYNESLYFLEC+V++GY PDVILCTK
Sbjct: 50 KVRVSAETRQTHVLSFDFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTK 109
Query: 181 LIKGFFNSKNVEKATRVMEILESKGDPDIFAYNALISGFCKLNRIEPANRVLERMRDRGF 360
LIKGFFNS+N+ KATRVMEILE G PD+FAYNALISGF K N++E ANRVL+RM+ RGF
Sbjct: 110 LIKGFFNSRNIGKATRVMEILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGF 169
Query: 361 FPDVVTYNIMIGSLCSRGRLDLALKMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMK 540
PDVVTYNIMIGS CSRG+LDLAL++ ++LL+DNC PTVITYTILIEATILDGGID AMK
Sbjct: 170 LPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMK 229
Query: 541 LLDEMLIRGLQPDMYTYNALIRGMCREGMIERAFE 645
LLDEML +GL+PD TYNA+IRGMC+E M+++AFE
Sbjct: 230 LLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFE 264
Score = 135 bits (340), Expect = 7e-30
Identities = 70/192 (36%), Positives = 112/192 (58%), Gaps = 1/192 (0%)
Frame = +1
Query: 76 LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
++ C GK + +L E L+ +P VI T LI+ ++ A ++++ + SKG
Sbjct: 179 MIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKG 238
Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
+PD YNA+I G CK ++ A +L + RG PD++TYNI++ +L SRG+
Sbjct: 239 LEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGE 298
Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
K++ +++ C P V+T++ILI DG ++EA+ LL M +GL+PD Y Y+ LI G
Sbjct: 299 KLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGF 358
Query: 613 CREGMIERAFEF 648
CREG ++ A EF
Sbjct: 359 CREGRLDLATEF 370
Score = 125 bits (314), Expect = 7e-27
Identities = 66/191 (34%), Positives = 108/191 (56%), Gaps = 1/191 (0%)
Frame = +1
Query: 76 LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
LL GK++E + +++ G KP+V+ + LI VE+A ++ ++ KG
Sbjct: 284 LLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKG 343
Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
PD + Y+ LI+GFC+ R++ A LE M G PD+V YN ++ LC G+ D AL
Sbjct: 344 LKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQAL 403
Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
++ ++L E C P V +Y L A G A++++ ++L +G+ PD TYN+LI +
Sbjct: 404 EVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCL 463
Query: 613 CREGMIERAFE 645
CR+GM++ A E
Sbjct: 464 CRDGMVDEAIE 474
Score = 110 bits (276), Expect = 2e-22
Identities = 63/191 (32%), Positives = 101/191 (52%), Gaps = 1/191 (0%)
Frame = +1
Query: 76 LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
L+ C+ GK E++ L + +G KPD LI GF ++ AT +E + S G
Sbjct: 319 LIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDG 378
Query: 256 D-PDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
PDI YN +++G C+ + + A V E++ + G P+V +YN + +L S G AL
Sbjct: 379 CLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRAL 438
Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
+M+ +LL P ITY LI DG +DEA++LL +M +P++ +YN ++ G+
Sbjct: 439 EMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGL 498
Query: 613 CREGMIERAFE 645
C+ A E
Sbjct: 499 CKVNRANDAIE 509
Score = 102 bits (254), Expect = 6e-20
Identities = 54/191 (28%), Positives = 100/191 (52%), Gaps = 1/191 (0%)
Frame = +1
Query: 76 LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
L+ + G + ++ L+ ++++G +PD + +I+G V+KA ++ L S+G
Sbjct: 214 LIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRG 273
Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
PDI YN L+ + +++ M G P+VVT++I+IG+LC G+++ A+
Sbjct: 274 CKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAV 333
Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
++ + E P Y LI +G +D A + L+ M+ G PD+ YN ++ G+
Sbjct: 334 NLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGL 393
Query: 613 CREGMIERAFE 645
CR G ++A E
Sbjct: 394 CRTGKADQALE 404
Score = 80.5 bits (197), Expect = 3e-13
Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 1/156 (0%)
Frame = +1
Query: 91 CKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATR-VMEILESKGDPDI 267
C+ GK +++L E L G P+V L ++S + +A ++++L DPD
Sbjct: 394 CRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDE 453
Query: 268 FAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLALKMMDQ 447
YN+LIS C+ ++ A +L M+ + P+VV+YNI++ LC R + A++++
Sbjct: 454 ITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAA 513
Query: 448 LLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEM 555
+ E C P TY +LIE G EAM+L + +
Sbjct: 514 MTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSL 549
>ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 590
Score = 316 bits (809), Expect = 3e-84
Identities = 148/214 (69%), Positives = 182/214 (85%)
Frame = +1
Query: 7 RVSTDSTLTHLHSHNFQESHLVKLLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLI 186
RV+ H ++F++++ +K LNRSCK+ KY+ESLYFL+ +VNRGYKPDVILCTKLI
Sbjct: 60 RVNETKPTKHDQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLI 119
Query: 187 KGFFNSKNVEKATRVMEILESKGDPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFP 366
KGFFN K +EKA +VMEILE G PD+FAYNA+ISGFCK +R++ A++VL+RM+ RGF P
Sbjct: 120 KGFFNMKKIEKAIQVMEILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEP 179
Query: 367 DVVTYNIMIGSLCSRGRLDLALKMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLL 546
DVVTYNI+IG+ C RGRLDLAL++MDQLL+DNC PTVITYTILIEATI GGIDEAMKLL
Sbjct: 180 DVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLL 239
Query: 547 DEMLIRGLQPDMYTYNALIRGMCREGMIERAFEF 648
DEML RGL+PD YTYN ++ GMC+EGM++RAFEF
Sbjct: 240 DEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEF 273
Score = 122 bits (305), Expect = 8e-26
Identities = 66/192 (34%), Positives = 105/192 (54%), Gaps = 1/192 (0%)
Frame = +1
Query: 76 LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
L+ C G+ + +L ++ L+ KP VI T LI+ +++A ++++ + S+G
Sbjct: 187 LIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRG 246
Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
PD + YN +++G CK ++ A L R+ G V TYNI++ L + G+ +
Sbjct: 247 LRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGE 306
Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
K+M +L C P ITY+ LI A DG IDEA +L M + L PD Y+Y+ LI +
Sbjct: 307 KLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISAL 366
Query: 613 CREGMIERAFEF 648
CREG ++ A EF
Sbjct: 367 CREGKVDLAIEF 378
Score = 110 bits (276), Expect = 2e-22
Identities = 62/214 (28%), Positives = 112/214 (52%), Gaps = 1/214 (0%)
Frame = +1
Query: 7 RVSTDSTLTHLHSHNFQESHLVKLLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLI 186
R+S + + + ++N LL GK+ + ++ +G +P+ I + LI
Sbjct: 276 RISKNGCVAGVSTYNI-------LLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLI 328
Query: 187 KGFFNSKNVEKATRVMEILESKG-DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFF 363
+++A V+++++ K PD ++Y+ LIS C+ +++ A L+ M G
Sbjct: 329 TALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHL 388
Query: 364 PDVVTYNIMIGSLCSRGRLDLALKMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKL 543
PD+++YN ++ SLC G D AL + ++L E C P +Y L A G A+ +
Sbjct: 389 PDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGM 448
Query: 544 LDEMLIRGLQPDMYTYNALIRGMCREGMIERAFE 645
+ EML G+ PD TYN+LI +CR+G++++A E
Sbjct: 449 ILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIE 482
Score = 91.7 bits (226), Expect = 1e-16
Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 2/192 (1%)
Frame = +1
Query: 76 LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
L+ C+ GK +E+ L+ + + PD LI V+ A ++ + S G
Sbjct: 327 LITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGG 386
Query: 256 D-PDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
PDI +YN++++ CK + A + E++ + G P+ +YN + G+L S G AL
Sbjct: 387 HLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRAL 446
Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEML-IRGLQPDMYTYNALIRG 609
M+ ++L + P ITY LI DG +D+A++LL +M QP + +YN ++ G
Sbjct: 447 GMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLG 506
Query: 610 MCREGMIERAFE 645
+C+ I A E
Sbjct: 507 LCKVQRIIDAIE 518
Score = 87.0 bits (214), Expect = 3e-15
Identities = 52/182 (28%), Positives = 96/182 (52%), Gaps = 3/182 (1%)
Frame = +1
Query: 76 LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
L++ C+ GK + ++ FL+ +++ G+ PD++ ++ + N ++A + E L G
Sbjct: 362 LISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVG 421
Query: 256 -DPDIFAYNALISGFCKL-NRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLA 429
P+ +YN L ++I +LE M G PD +TYN +I LC G +D A
Sbjct: 422 CPPNAGSYNTLFGALWSSGDKIRALGMILE-MLSNGIDPDEITYNSLISCLCRDGLVDQA 480
Query: 430 LKMMDQLLE-DNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIR 606
++++ + E + C PTVI+Y ++ I +A+++L M+ G P+ TY LI+
Sbjct: 481 IELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQ 540
Query: 607 GM 612
G+
Sbjct: 541 GI 542
Score = 67.8 bits (164), Expect = 2e-09
Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 2/158 (1%)
Frame = +1
Query: 76 LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKAT-RVMEILESK 252
+L CK G +E+L E L G P+ L ++S + +A ++E+L +
Sbjct: 397 ILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNG 456
Query: 253 GDPDIFAYNALISGFCKLNRIEPANRVLERM-RDRGFFPDVVTYNIMIGSLCSRGRLDLA 429
DPD YN+LIS C+ ++ A +L M P V++YN ++ LC R+ A
Sbjct: 457 IDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDA 516
Query: 430 LKMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKL 543
++++ ++ + C+P TYT+LI+ G +AM+L
Sbjct: 517 IEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMEL 554