BLASTX nr result

ID: Cnidium21_contig00038284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038284
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containi...   343   1e-92
emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]   340   2e-91
emb|CBI22375.3| unnamed protein product [Vitis vinifera]              336   3e-90
ref|XP_002521980.1| pentatricopeptide repeat-containing protein,...   335   3e-90
ref|XP_003590960.1| Pentatricopeptide repeat-containing protein ...   316   3e-84

>ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  343 bits (881), Expect = 1e-92
 Identities = 165/215 (76%), Positives = 194/215 (90%)
 Frame = +1

Query: 1   KVRVSTDSTLTHLHSHNFQESHLVKLLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTK 180
           KV VS ++   HL S++F+E+HL+KLLNRSCKAGK+NESLYFLECLVN+GY PDVILCTK
Sbjct: 49  KVGVSAEARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTK 108

Query: 181 LIKGFFNSKNVEKATRVMEILESKGDPDIFAYNALISGFCKLNRIEPANRVLERMRDRGF 360
           LIKGFFN KN+EKA+RVMEILES  +PD+FAYNA+ISGFCK+NRIE A +VL RM+ RGF
Sbjct: 109 LIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGF 168

Query: 361 FPDVVTYNIMIGSLCSRGRLDLALKMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMK 540
            PD+VTYNIMIGSLC+R +L LALK++DQLL DNCMPTVITYTILIEATI++GGI+EAMK
Sbjct: 169 LPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMK 228

Query: 541 LLDEMLIRGLQPDMYTYNALIRGMCREGMIERAFE 645
           LL+EML RGL PDMYTYNA+IRGMC+EGM+ERA E
Sbjct: 229 LLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAE 263



 Score =  116 bits (291), Expect = 3e-24
 Identities = 61/191 (31%), Positives = 103/191 (53%), Gaps = 1/191 (0%)
 Frame = +1

Query: 76  LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
           L+  +   G  NE++  LE ++ RG  PD+     +I+G      VE+A  ++  L SKG
Sbjct: 213 LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKG 272

Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
             PD+ +YN L+  F    + +   +++  M  RG  P+ VTY+I+I SLC  GR+D A+
Sbjct: 273 CKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAI 332

Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
            ++  ++E    P   +Y  LI A   +G +D A+ ++D M+  G  PD+  YN ++  +
Sbjct: 333 SVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAAL 392

Query: 613 CREGMIERAFE 645
           C+ G   +A E
Sbjct: 393 CKNGNANQALE 403



 Score =  116 bits (290), Expect = 4e-24
 Identities = 61/224 (27%), Positives = 114/224 (50%), Gaps = 36/224 (16%)
 Frame = +1

Query: 76  LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
           ++   CK G    +   +  L ++G KPDVI    L++ F N    ++  +++  + S+G
Sbjct: 248 IIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 307

Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
            +P+   Y+ LIS  C+  RI+ A  VL+ M ++   PD  +Y+ +I +LC  GRLDLA+
Sbjct: 308 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 367

Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDE-------------------- 552
            +MD ++ + C+P ++ Y  ++ A   +G  ++A+++ ++                    
Sbjct: 368 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 427

Query: 553 ---------------MLIRGLQPDMYTYNALIRGMCREGMIERA 639
                          M+ +G+ PD  TYN+LI  +CR+G++E A
Sbjct: 428 WSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEA 471



 Score =  114 bits (285), Expect = 2e-23
 Identities = 60/189 (31%), Positives = 107/189 (56%), Gaps = 1/189 (0%)
 Frame = +1

Query: 76  LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
           ++   C   K   +L  L+ L+     P VI  T LI+       + +A +++E + ++G
Sbjct: 178 MIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG 237

Query: 256 D-PDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
             PD++ YNA+I G CK   +E A  ++  +  +G  PDV++YNI++ +  ++G+ D   
Sbjct: 238 LLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGE 297

Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
           K++ ++    C P  +TY+ILI +    G IDEA+ +L  M+ + L PD Y+Y+ LI  +
Sbjct: 298 KLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISAL 357

Query: 613 CREGMIERA 639
           C+EG ++ A
Sbjct: 358 CKEGRLDLA 366



 Score =  101 bits (251), Expect = 1e-19
 Identities = 57/189 (30%), Positives = 97/189 (51%), Gaps = 1/189 (0%)
 Frame = +1

Query: 76  LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
           L++  C+ G+ +E++  L+ ++ +   PD      LI        ++ A  +M+ + S G
Sbjct: 318 LISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 377

Query: 256 D-PDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
             PDI  YN +++  CK      A  +  ++R  G  P+V +YN MI +L S G    AL
Sbjct: 378 CLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRAL 437

Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
            M+  ++     P  ITY  LI     DG ++EA+ LLD+M   G +P + +YN ++ G+
Sbjct: 438 GMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGL 497

Query: 613 CREGMIERA 639
           C+   I+ A
Sbjct: 498 CKVRRIDDA 506



 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 55/164 (33%), Positives = 85/164 (51%), Gaps = 1/164 (0%)
 Frame = +1

Query: 76  LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
           +L   CK G  N++L     L   G  P+V     +I   ++  +  +A  ++  + SKG
Sbjct: 388 ILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 447

Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
            DPD   YN+LIS  C+   +E A  +L+ M   GF P V++YNI++  LC   R+D A+
Sbjct: 448 VDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAI 507

Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIR 564
            M  +++E  C P   TY +LIE     G   EAM+L + +  R
Sbjct: 508 GMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR 551



 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
 Frame = +1

Query: 76  LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
           L++  CK G+ + ++  ++ +++ G  PD++    ++     + N  +A  +   L   G
Sbjct: 353 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 412

Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
             P++ +YN +IS          A  ++  M  +G  PD +TYN +I  LC  G ++ A+
Sbjct: 413 CPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAI 472

Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
            ++D + +    PTVI+Y I++        ID+A+ +  EM+ +G +P+  TY  LI G+
Sbjct: 473 GLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 532

Query: 613 CREGMIERAFE 645
              G    A E
Sbjct: 533 GFAGWRTEAME 543


>emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  340 bits (871), Expect = 2e-91
 Identities = 163/215 (75%), Positives = 193/215 (89%)
 Frame = +1

Query: 1   KVRVSTDSTLTHLHSHNFQESHLVKLLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTK 180
           KV VS ++   HL S++F+E+HL+KLLNRSCKAGK+NESLYFLECLVN+GY PDVILCTK
Sbjct: 59  KVGVSAEARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTK 118

Query: 181 LIKGFFNSKNVEKATRVMEILESKGDPDIFAYNALISGFCKLNRIEPANRVLERMRDRGF 360
           LIKGFFN KN+EKA+RVMEILES  +PD+FAYNA+ISGFCK+N+IE A +VL RM+ RGF
Sbjct: 119 LIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGF 178

Query: 361 FPDVVTYNIMIGSLCSRGRLDLALKMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMK 540
            PD+VTYNIMIGSLC+R +L LAL ++DQLL DNCMPTVITYTILIEATI++GGI+EAMK
Sbjct: 179 LPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMK 238

Query: 541 LLDEMLIRGLQPDMYTYNALIRGMCREGMIERAFE 645
           LL+EML RGL PDMYTYNA+IRGMC+EGM+ERA E
Sbjct: 239 LLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAE 273



 Score =  117 bits (294), Expect = 1e-24
 Identities = 61/191 (31%), Positives = 104/191 (54%), Gaps = 1/191 (0%)
 Frame = +1

Query: 76  LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
           L+  +   G  NE++  LE ++ RG  PD+     +I+G      VE+A  ++  L SKG
Sbjct: 223 LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKG 282

Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
            +PD+ +YN L+  F    + +   +++  M  RG  P+ VTY+I+I SLC  GR+D A+
Sbjct: 283 CEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAI 342

Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
            ++  ++E    P   +Y  LI A   +G +D A+ ++D M+  G  PD+  YN ++  +
Sbjct: 343 SVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAAL 402

Query: 613 CREGMIERAFE 645
           C+ G   +A E
Sbjct: 403 CKNGNANQALE 413



 Score =  115 bits (287), Expect = 9e-24
 Identities = 60/224 (26%), Positives = 114/224 (50%), Gaps = 36/224 (16%)
 Frame = +1

Query: 76  LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
           ++   CK G    +   +  L ++G +PDVI    L++ F N    ++  +++  + S+G
Sbjct: 258 IIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 317

Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
            +P+   Y+ LIS  C+  RI+ A  VL+ M ++   PD  +Y+ +I +LC  GRLDLA+
Sbjct: 318 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 377

Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDE-------------------- 552
            +MD ++ + C+P ++ Y  ++ A   +G  ++A+++ ++                    
Sbjct: 378 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISAL 437

Query: 553 ---------------MLIRGLQPDMYTYNALIRGMCREGMIERA 639
                          M+ +G+ PD  TYN+LI  +CR+G++E A
Sbjct: 438 WSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEA 481



 Score =  114 bits (285), Expect = 2e-23
 Identities = 60/189 (31%), Positives = 107/189 (56%), Gaps = 1/189 (0%)
 Frame = +1

Query: 76  LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
           ++   C   K   +L  L+ L+     P VI  T LI+       + +A +++E + ++G
Sbjct: 188 MIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG 247

Query: 256 D-PDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
             PD++ YNA+I G CK   +E A  ++  +  +G  PDV++YNI++ +  ++G+ D   
Sbjct: 248 LLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGE 307

Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
           K++ ++    C P  +TY+ILI +    G IDEA+ +L  M+ + L PD Y+Y+ LI  +
Sbjct: 308 KLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISAL 367

Query: 613 CREGMIERA 639
           C+EG ++ A
Sbjct: 368 CKEGRLDLA 376



 Score =  101 bits (251), Expect = 1e-19
 Identities = 57/189 (30%), Positives = 97/189 (51%), Gaps = 1/189 (0%)
 Frame = +1

Query: 76  LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
           L++  C+ G+ +E++  L+ ++ +   PD      LI        ++ A  +M+ + S G
Sbjct: 328 LISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 387

Query: 256 D-PDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
             PDI  YN +++  CK      A  +  ++R  G  P+V +YN MI +L S G    AL
Sbjct: 388 CLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRAL 447

Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
            M+  ++     P  ITY  LI     DG ++EA+ LLD+M   G +P + +YN ++ G+
Sbjct: 448 GMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGL 507

Query: 613 CREGMIERA 639
           C+   I+ A
Sbjct: 508 CKVRRIDDA 516



 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 55/164 (33%), Positives = 85/164 (51%), Gaps = 1/164 (0%)
 Frame = +1

Query: 76  LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
           +L   CK G  N++L     L   G  P+V     +I   ++  +  +A  ++  + SKG
Sbjct: 398 ILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 457

Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
            DPD   YN+LIS  C+   +E A  +L+ M   GF P V++YNI++  LC   R+D A+
Sbjct: 458 IDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAI 517

Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIR 564
            M  +++E  C P   TY +LIE     G   EAM+L + +  R
Sbjct: 518 GMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR 561



 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
 Frame = +1

Query: 76  LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
           L++  CK G+ + ++  ++ +++ G  PD++    ++     + N  +A  +   L   G
Sbjct: 363 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 422

Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
             P++ +YN +IS          A  ++  M  +G  PD +TYN +I  LC  G ++ A+
Sbjct: 423 CPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAI 482

Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
            ++D + +    PTVI+Y I++        ID+A+ +  EM+ +G +P+  TY  LI G+
Sbjct: 483 GLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 542

Query: 613 CREGMIERAFE 645
              G    A E
Sbjct: 543 GFAGWRTEAME 553


>emb|CBI22375.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  336 bits (861), Expect = 3e-90
 Identities = 161/209 (77%), Positives = 189/209 (90%)
 Frame = +1

Query: 1   KVRVSTDSTLTHLHSHNFQESHLVKLLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTK 180
           KV VS ++   HL S++F+E+HL+KLLNRSCKAGK+NESLYFLECLVN+GY PDVILCTK
Sbjct: 49  KVGVSAEARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTK 108

Query: 181 LIKGFFNSKNVEKATRVMEILESKGDPDIFAYNALISGFCKLNRIEPANRVLERMRDRGF 360
           LIKGFFN KN+EKA+RVMEILES  +PD+FAYNA+ISGFCK+NRIE A +VL RM+ RGF
Sbjct: 109 LIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGF 168

Query: 361 FPDVVTYNIMIGSLCSRGRLDLALKMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMK 540
            PD+VTYNIMIGSLC+R +L LALK++DQLL DNCMPTVITYTILIEATI++GGI+EAMK
Sbjct: 169 LPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMK 228

Query: 541 LLDEMLIRGLQPDMYTYNALIRGMCREGM 627
           LL+EML RGL PDMYTYNA+IRGMC+EGM
Sbjct: 229 LLEEMLARGLLPDMYTYNAIIRGMCKEGM 257



 Score =  108 bits (271), Expect = 7e-22
 Identities = 59/191 (30%), Positives = 102/191 (53%), Gaps = 1/191 (0%)
 Frame = +1

Query: 76  LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
           ++   C   K   +L  L+ L+     P VI  T LI+       + +A +++E + ++G
Sbjct: 178 MIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG 237

Query: 256 D-PDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
             PD++ YNA+I G CK    +   +++  M  RG  P+ VTY+I+I SLC  GR+D A+
Sbjct: 238 LLPDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAI 297

Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
            ++  ++E    P   +Y  LI A   +G +D A+ ++D M+  G  PD+  YN ++  +
Sbjct: 298 SVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAAL 357

Query: 613 CREGMIERAFE 645
           C+ G   +A E
Sbjct: 358 CKNGNANQALE 368



 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 48/169 (28%), Positives = 96/169 (56%), Gaps = 1/169 (0%)
 Frame = +1

Query: 76  LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
           L+  +   G  NE++  LE ++ RG  PD+     +I+G       ++  +++  + S+G
Sbjct: 213 LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSRG 272

Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
            +P+   Y+ LIS  C+  RI+ A  VL+ M ++   PD  +Y+ +I +LC  GRLDLA+
Sbjct: 273 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 332

Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPD 579
            +MD ++ + C+P ++ Y  ++ A   +G  ++A+++ +++   G  P+
Sbjct: 333 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPN 381


>ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538784|gb|EEF40384.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score =  335 bits (860), Expect = 3e-90
 Identities = 161/215 (74%), Positives = 191/215 (88%)
 Frame = +1

Query: 1   KVRVSTDSTLTHLHSHNFQESHLVKLLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTK 180
           KVRVS ++  TH+ S +F+E HL+KLLNRSC+AGKYNESLYFLEC+V++GY PDVILCTK
Sbjct: 50  KVRVSAETRQTHVLSFDFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTK 109

Query: 181 LIKGFFNSKNVEKATRVMEILESKGDPDIFAYNALISGFCKLNRIEPANRVLERMRDRGF 360
           LIKGFFNS+N+ KATRVMEILE  G PD+FAYNALISGF K N++E ANRVL+RM+ RGF
Sbjct: 110 LIKGFFNSRNIGKATRVMEILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGF 169

Query: 361 FPDVVTYNIMIGSLCSRGRLDLALKMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMK 540
            PDVVTYNIMIGS CSRG+LDLAL++ ++LL+DNC PTVITYTILIEATILDGGID AMK
Sbjct: 170 LPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMK 229

Query: 541 LLDEMLIRGLQPDMYTYNALIRGMCREGMIERAFE 645
           LLDEML +GL+PD  TYNA+IRGMC+E M+++AFE
Sbjct: 230 LLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFE 264



 Score =  135 bits (340), Expect = 7e-30
 Identities = 70/192 (36%), Positives = 112/192 (58%), Gaps = 1/192 (0%)
 Frame = +1

Query: 76  LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
           ++   C  GK + +L   E L+    +P VI  T LI+       ++ A ++++ + SKG
Sbjct: 179 MIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKG 238

Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
            +PD   YNA+I G CK   ++ A  +L  +  RG  PD++TYNI++ +L SRG+     
Sbjct: 239 LEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGE 298

Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
           K++ +++   C P V+T++ILI     DG ++EA+ LL  M  +GL+PD Y Y+ LI G 
Sbjct: 299 KLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGF 358

Query: 613 CREGMIERAFEF 648
           CREG ++ A EF
Sbjct: 359 CREGRLDLATEF 370



 Score =  125 bits (314), Expect = 7e-27
 Identities = 66/191 (34%), Positives = 108/191 (56%), Gaps = 1/191 (0%)
 Frame = +1

Query: 76  LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
           LL      GK++E    +  +++ G KP+V+  + LI        VE+A  ++  ++ KG
Sbjct: 284 LLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKG 343

Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
             PD + Y+ LI+GFC+  R++ A   LE M   G  PD+V YN ++  LC  G+ D AL
Sbjct: 344 LKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQAL 403

Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
           ++ ++L E  C P V +Y  L  A    G    A++++ ++L +G+ PD  TYN+LI  +
Sbjct: 404 EVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCL 463

Query: 613 CREGMIERAFE 645
           CR+GM++ A E
Sbjct: 464 CRDGMVDEAIE 474



 Score =  110 bits (276), Expect = 2e-22
 Identities = 63/191 (32%), Positives = 101/191 (52%), Gaps = 1/191 (0%)
 Frame = +1

Query: 76  LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
           L+   C+ GK  E++  L  +  +G KPD      LI GF     ++ AT  +E + S G
Sbjct: 319 LIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDG 378

Query: 256 D-PDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
             PDI  YN +++G C+  + + A  V E++ + G  P+V +YN +  +L S G    AL
Sbjct: 379 CLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRAL 438

Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
           +M+ +LL     P  ITY  LI     DG +DEA++LL +M     +P++ +YN ++ G+
Sbjct: 439 EMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGL 498

Query: 613 CREGMIERAFE 645
           C+      A E
Sbjct: 499 CKVNRANDAIE 509



 Score =  102 bits (254), Expect = 6e-20
 Identities = 54/191 (28%), Positives = 100/191 (52%), Gaps = 1/191 (0%)
 Frame = +1

Query: 76  LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
           L+  +   G  + ++  L+ ++++G +PD +    +I+G      V+KA  ++  L S+G
Sbjct: 214 LIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRG 273

Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
             PDI  YN L+       +     +++  M   G  P+VVT++I+IG+LC  G+++ A+
Sbjct: 274 CKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAV 333

Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
            ++  + E    P    Y  LI     +G +D A + L+ M+  G  PD+  YN ++ G+
Sbjct: 334 NLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGL 393

Query: 613 CREGMIERAFE 645
           CR G  ++A E
Sbjct: 394 CRTGKADQALE 404



 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 1/156 (0%)
 Frame = +1

Query: 91  CKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATR-VMEILESKGDPDI 267
           C+ GK +++L   E L   G  P+V     L    ++S +  +A   ++++L    DPD 
Sbjct: 394 CRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDE 453

Query: 268 FAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLALKMMDQ 447
             YN+LIS  C+   ++ A  +L  M+   + P+VV+YNI++  LC   R + A++++  
Sbjct: 454 ITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAA 513

Query: 448 LLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEM 555
           + E  C P   TY +LIE     G   EAM+L + +
Sbjct: 514 MTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSL 549


>ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355480008|gb|AES61211.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  316 bits (809), Expect = 3e-84
 Identities = 148/214 (69%), Positives = 182/214 (85%)
 Frame = +1

Query: 7   RVSTDSTLTHLHSHNFQESHLVKLLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLI 186
           RV+      H   ++F++++ +K LNRSCK+ KY+ESLYFL+ +VNRGYKPDVILCTKLI
Sbjct: 60  RVNETKPTKHDQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLI 119

Query: 187 KGFFNSKNVEKATRVMEILESKGDPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFP 366
           KGFFN K +EKA +VMEILE  G PD+FAYNA+ISGFCK +R++ A++VL+RM+ RGF P
Sbjct: 120 KGFFNMKKIEKAIQVMEILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEP 179

Query: 367 DVVTYNIMIGSLCSRGRLDLALKMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLL 546
           DVVTYNI+IG+ C RGRLDLAL++MDQLL+DNC PTVITYTILIEATI  GGIDEAMKLL
Sbjct: 180 DVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLL 239

Query: 547 DEMLIRGLQPDMYTYNALIRGMCREGMIERAFEF 648
           DEML RGL+PD YTYN ++ GMC+EGM++RAFEF
Sbjct: 240 DEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEF 273



 Score =  122 bits (305), Expect = 8e-26
 Identities = 66/192 (34%), Positives = 105/192 (54%), Gaps = 1/192 (0%)
 Frame = +1

Query: 76  LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
           L+   C  G+ + +L  ++ L+    KP VI  T LI+       +++A ++++ + S+G
Sbjct: 187 LIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRG 246

Query: 256 -DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
             PD + YN +++G CK   ++ A   L R+   G    V TYNI++  L + G+ +   
Sbjct: 247 LRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGE 306

Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIRGM 612
           K+M  +L   C P  ITY+ LI A   DG IDEA  +L  M  + L PD Y+Y+ LI  +
Sbjct: 307 KLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISAL 366

Query: 613 CREGMIERAFEF 648
           CREG ++ A EF
Sbjct: 367 CREGKVDLAIEF 378



 Score =  110 bits (276), Expect = 2e-22
 Identities = 62/214 (28%), Positives = 112/214 (52%), Gaps = 1/214 (0%)
 Frame = +1

Query: 7   RVSTDSTLTHLHSHNFQESHLVKLLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLI 186
           R+S +  +  + ++N        LL      GK+      +  ++ +G +P+ I  + LI
Sbjct: 276 RISKNGCVAGVSTYNI-------LLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLI 328

Query: 187 KGFFNSKNVEKATRVMEILESKG-DPDIFAYNALISGFCKLNRIEPANRVLERMRDRGFF 363
                   +++A  V+++++ K   PD ++Y+ LIS  C+  +++ A   L+ M   G  
Sbjct: 329 TALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHL 388

Query: 364 PDVVTYNIMIGSLCSRGRLDLALKMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKL 543
           PD+++YN ++ SLC  G  D AL + ++L E  C P   +Y  L  A    G    A+ +
Sbjct: 389 PDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGM 448

Query: 544 LDEMLIRGLQPDMYTYNALIRGMCREGMIERAFE 645
           + EML  G+ PD  TYN+LI  +CR+G++++A E
Sbjct: 449 ILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIE 482



 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 2/192 (1%)
 Frame = +1

Query: 76  LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
           L+   C+ GK +E+   L+ +  +   PD      LI        V+ A   ++ + S G
Sbjct: 327 LITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGG 386

Query: 256 D-PDIFAYNALISGFCKLNRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLAL 432
             PDI +YN++++  CK    + A  + E++ + G  P+  +YN + G+L S G    AL
Sbjct: 387 HLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRAL 446

Query: 433 KMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKLLDEML-IRGLQPDMYTYNALIRG 609
            M+ ++L +   P  ITY  LI     DG +D+A++LL +M      QP + +YN ++ G
Sbjct: 447 GMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLG 506

Query: 610 MCREGMIERAFE 645
           +C+   I  A E
Sbjct: 507 LCKVQRIIDAIE 518



 Score = 87.0 bits (214), Expect = 3e-15
 Identities = 52/182 (28%), Positives = 96/182 (52%), Gaps = 3/182 (1%)
 Frame = +1

Query: 76  LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKATRVMEILESKG 255
           L++  C+ GK + ++ FL+ +++ G+ PD++    ++     + N ++A  + E L   G
Sbjct: 362 LISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVG 421

Query: 256 -DPDIFAYNALISGFCKL-NRIEPANRVLERMRDRGFFPDVVTYNIMIGSLCSRGRLDLA 429
             P+  +YN L        ++I     +LE M   G  PD +TYN +I  LC  G +D A
Sbjct: 422 CPPNAGSYNTLFGALWSSGDKIRALGMILE-MLSNGIDPDEITYNSLISCLCRDGLVDQA 480

Query: 430 LKMMDQLLE-DNCMPTVITYTILIEATILDGGIDEAMKLLDEMLIRGLQPDMYTYNALIR 606
           ++++  + E + C PTVI+Y  ++        I +A+++L  M+  G  P+  TY  LI+
Sbjct: 481 IELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQ 540

Query: 607 GM 612
           G+
Sbjct: 541 GI 542



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 2/158 (1%)
 Frame = +1

Query: 76  LLNRSCKAGKYNESLYFLECLVNRGYKPDVILCTKLIKGFFNSKNVEKAT-RVMEILESK 252
           +L   CK G  +E+L   E L   G  P+      L    ++S +  +A   ++E+L + 
Sbjct: 397 ILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNG 456

Query: 253 GDPDIFAYNALISGFCKLNRIEPANRVLERM-RDRGFFPDVVTYNIMIGSLCSRGRLDLA 429
            DPD   YN+LIS  C+   ++ A  +L  M       P V++YN ++  LC   R+  A
Sbjct: 457 IDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDA 516

Query: 430 LKMMDQLLEDNCMPTVITYTILIEATILDGGIDEAMKL 543
           ++++  ++ + C+P   TYT+LI+     G   +AM+L
Sbjct: 517 IEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMEL 554


Top