BLASTX nr result

ID: Cnidium21_contig00038282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038282
         (1098 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]   284   2e-74
ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like...   283   4e-74
ref|XP_002529293.1| ring finger protein, putative [Ricinus commu...   273   7e-71
ref|XP_002314635.1| predicted protein [Populus trichocarpa] gi|2...   268   2e-69
ref|XP_003555510.1| PREDICTED: RING-H2 finger protein ATL16-like...   255   1e-65

>emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]
          Length = 419

 Score =  284 bits (727), Expect = 2e-74
 Identities = 165/320 (51%), Positives = 205/320 (64%), Gaps = 32/320 (10%)
 Frame = +3

Query: 192  MDVISIN--IHVSQSLSQIKXXXXXXXXXXXHNG---FPXXXXXXXXXXXXXXXXXXXXX 356
            MD++S +  IH SQ+ S IK           H+    FP                     
Sbjct: 68   MDLVSTDSSIHGSQAFSPIKSQASSVLPSPSHSSDTSFPIIAIAVIGILATAFLLVSYYI 127

Query: 357  FVIKCCLNWHRIDILGRFSLSRNRRNEDPLMGYTPGIESRGLDESVIRSIPIFQFKNIKK 536
            FVIKCCLNWHRID+L RFS SR+R  EDPLM Y+P IESRGLDESVIRSIPIFQF+  K 
Sbjct: 128  FVIKCCLNWHRIDLLRRFSFSRSRHREDPLMVYSPAIESRGLDESVIRSIPIFQFR--KG 185

Query: 537  QDPEKGI-SFSECAVCLNEFHEQEKLRMIPNCGHLFHIDCIDVWLQNNANCPLCRTSISL 713
               E G  S  ECAVCLNEF E+EKLR+IPNC H+FHIDCIDVWLQ+NANCPLCRTSIS 
Sbjct: 186  GGREFGERSHCECAVCLNEFQEEEKLRIIPNCSHIFHIDCIDVWLQSNANCPLCRTSIST 245

Query: 714  SLQFPVLDQVIALTTTPVHHDQALDNDNFVGLEEDYVVIELGEEHNQE------------ 857
            + +FPV  Q+IA +++P   D +   +N++G +ED+VVIELG + + +            
Sbjct: 246  TPRFPV-HQIIAPSSSP--QDPSPYANNYIGGDEDFVVIELGNDSSADSSLLRPPERLNS 302

Query: 858  -------------KPANKIVKKRSKKIGFCH-SSMGDECIDIRVKDERLSVQPIRRSFSM 995
                         K   +IV K+++K  F H +SMGDECID R KD++ S+QPIRRSFSM
Sbjct: 303  RELSAPSISPSPRKLEQRIVPKKARK--FHHVASMGDECIDTRGKDDQFSIQPIRRSFSM 360

Query: 996  DSATDRQLYLAVQEIVNQNK 1055
            DS+ DRQLYLA+QEI+ QN+
Sbjct: 361  DSSNDRQLYLAIQEILQQNR 380


>ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like [Vitis vinifera]
          Length = 359

 Score =  283 bits (725), Expect = 4e-74
 Identities = 165/320 (51%), Positives = 205/320 (64%), Gaps = 32/320 (10%)
 Frame = +3

Query: 192  MDVISIN--IHVSQSLSQIKXXXXXXXXXXXHNG---FPXXXXXXXXXXXXXXXXXXXXX 356
            MD++S +  IH SQ+ S IK           H+    FP                     
Sbjct: 8    MDLVSTDSSIHGSQAFSPIKSQASSVLPSPSHSSDTSFPIIAIAVIGILATAFLLVSYYI 67

Query: 357  FVIKCCLNWHRIDILGRFSLSRNRRNEDPLMGYTPGIESRGLDESVIRSIPIFQFKNIKK 536
            FVIKCCLNWHRID+L RFS SR+R  EDPLM Y+P IESRGLDESVIRSIPIFQF+  K 
Sbjct: 68   FVIKCCLNWHRIDLLRRFSFSRSRHPEDPLMVYSPAIESRGLDESVIRSIPIFQFR--KG 125

Query: 537  QDPEKGI-SFSECAVCLNEFHEQEKLRMIPNCGHLFHIDCIDVWLQNNANCPLCRTSISL 713
               E G  S  ECAVCLNEF E+EKLR+IPNC H+FHIDCIDVWLQ+NANCPLCRTSIS 
Sbjct: 126  GGREFGERSHCECAVCLNEFQEEEKLRIIPNCSHIFHIDCIDVWLQSNANCPLCRTSIST 185

Query: 714  SLQFPVLDQVIALTTTPVHHDQALDNDNFVGLEEDYVVIELGEEHNQE------------ 857
            + +FPV  Q+IA +++P   D +   +N++G +ED+VVIELG + + +            
Sbjct: 186  TPRFPV-HQIIAPSSSP--QDPSPYANNYIGGDEDFVVIELGNDSSADSSLLRPPERLNS 242

Query: 858  -------------KPANKIVKKRSKKIGFCH-SSMGDECIDIRVKDERLSVQPIRRSFSM 995
                         K   +IV K+++K  F H +SMGDECID R KD++ S+QPIRRSFSM
Sbjct: 243  RELSAPSISPSPRKLEQRIVPKKARK--FHHVASMGDECIDTRGKDDQFSIQPIRRSFSM 300

Query: 996  DSATDRQLYLAVQEIVNQNK 1055
            DS+ DRQLYLA+QEI+ QN+
Sbjct: 301  DSSNDRQLYLAIQEILQQNR 320


>ref|XP_002529293.1| ring finger protein, putative [Ricinus communis]
            gi|223531217|gb|EEF33062.1| ring finger protein, putative
            [Ricinus communis]
          Length = 376

 Score =  273 bits (697), Expect = 7e-71
 Identities = 146/281 (51%), Positives = 187/281 (66%), Gaps = 43/281 (15%)
 Frame = +3

Query: 357  FVIKCCLNWHRIDILGRFSLSRNRRNEDPLMGYTPGIESRGLDESVIRSIPIFQFKNIKK 536
            FVIKCCLNWHRIDIL RFSLSRNR  EDPLMGY+P +E+RGLDESVIRSIPIF+FK    
Sbjct: 61   FVIKCCLNWHRIDILRRFSLSRNRNQEDPLMGYSPAMENRGLDESVIRSIPIFKFKKEGN 120

Query: 537  QDPE-KGISFSECAVCLNEFHEQEKLRMIPNCGHLFHIDCIDVWLQNNANCPLCRTSISL 713
               +  G + SECAVCLNEF E EKLR+IPNC H+FHIDCIDVWLQNNANCPLCR SIS 
Sbjct: 121  GSGDIGGRTLSECAVCLNEFQENEKLRIIPNCSHVFHIDCIDVWLQNNANCPLCRNSISS 180

Query: 714  SLQFPVLDQVIALTTTPVHHDQALDNDNFVGLEEDYVVIELGEEHN-------------- 851
            + +    D++IA +++P   D    +++ +G +EDYVVIELG  +N              
Sbjct: 181  TTRSIPFDRIIAPSSSP--QDPNPYSESLIGGDEDYVVIELGNINNNIINNSHNPADQTL 238

Query: 852  ----------------------------QEKPANKIVKKRSKKIGFCHSSMGDECIDIRV 947
                                        +++ ++  V+K+S+K     +SMGDECIDIR 
Sbjct: 239  LAAQERLMNSGELSIARPISPSSRRQKLEQRGSSGAVQKKSRKFSKL-TSMGDECIDIRG 297

Query: 948  KDERLSVQPIRRSFSMDSATDRQLYLAVQEIVNQNKNGNIN 1070
            KD++ ++QPIRRSFSMDS+ DRQLYL++QEI+ Q++   I+
Sbjct: 298  KDDQFAIQPIRRSFSMDSSADRQLYLSIQEIILQSRQQPID 338


>ref|XP_002314635.1| predicted protein [Populus trichocarpa] gi|222863675|gb|EEF00806.1|
            predicted protein [Populus trichocarpa]
          Length = 340

 Score =  268 bits (685), Expect = 2e-69
 Identities = 149/260 (57%), Positives = 181/260 (69%), Gaps = 27/260 (10%)
 Frame = +3

Query: 357  FVIKCCLNWHRIDILGRFSLSRNRRNEDPLMGYTPG-IESRGLDESVIRSIPIFQFKNIK 533
            FVIKCCLNWHRID+L RFSLSRNR +EDPLM Y+P  IESRGLDESVIRSIP+F+FK   
Sbjct: 45   FVIKCCLNWHRIDLLRRFSLSRNRNHEDPLMAYSPSAIESRGLDESVIRSIPVFKFKKEG 104

Query: 534  KQDPEKGI-SFSECAVCLNEFHEQEKLRMIPNCGHLFHIDCIDVWLQNNANCPLCRTSIS 710
                  G  SF ECAVCLNEF E EKLR IPNC H+FHIDCIDVWLQ+NANCPLCRTSIS
Sbjct: 105  NNVRNVGERSFCECAVCLNEFQEAEKLRRIPNCSHVFHIDCIDVWLQSNANCPLCRTSIS 164

Query: 711  LSLQFPVLDQVIALTTTPVHHDQALDNDNFVGLEEDYVVIELG-------------EEHN 851
             + +FP+ D +IA ++TP  HD    +++ +G +EDYVVIEL              E  N
Sbjct: 165  STTRFPI-DHIIAPSSTP--HDANPYSESVMGGDEDYVVIELSNHNSTDQTLLAAQERLN 221

Query: 852  QEKPANKIVKKRSKKI--GFCH---------SSMGDECIDIRVKDERLS-VQPIRRSFSM 995
              + + + +    +KI  G  H         +SMGDECID R KD++   +QPIRRSFSM
Sbjct: 222  SGELSARSISPSPRKIEQGVGHKKARNLNKVTSMGDECIDTRGKDDQFGLIQPIRRSFSM 281

Query: 996  DSATDRQLYLAVQEIVNQNK 1055
            DS+ DRQLYL++QEIV Q++
Sbjct: 282  DSSADRQLYLSIQEIVQQSR 301


>ref|XP_003555510.1| PREDICTED: RING-H2 finger protein ATL16-like [Glycine max]
          Length = 364

 Score =  255 bits (652), Expect = 1e-65
 Identities = 140/263 (53%), Positives = 178/263 (67%), Gaps = 27/263 (10%)
 Frame = +3

Query: 357  FVIKCCLNWHRIDILGRFSLSRNRRNEDPLMGYTPGIESRGLDESVIRSIPIFQFKNIKK 536
            FVIKCCLNWHRID+L RFS SR R  EDP   Y+PG ++RGLDE++IR IP+ Q+K    
Sbjct: 67   FVIKCCLNWHRIDVLRRFSPSRRR--EDPPPTYSPGTDTRGLDEALIRLIPVIQYKAQGD 124

Query: 537  QDPEKGISFSECAVCLNEFHEQEKLRMIPNCGHLFHIDCIDVWLQNNANCPLCRTSISLS 716
                +   F ECAVCLNEF E EKLR+IPNC H+FHIDCIDVWLQ+NANCPLCRT+ISL+
Sbjct: 125  NRDLEERRFCECAVCLNEFQEDEKLRIIPNCCHVFHIDCIDVWLQSNANCPLCRTTISLT 184

Query: 717  LQFPVLDQVIALTTTPVH-HDQALDNDNFVGLEEDYVVIELGEEHNQ-----------EK 860
             +F + DQ++ L  +  + HDQ    +N +G +ED+VVIELG +H++           E 
Sbjct: 185  SRFHI-DQLLNLRPSSSYPHDQTPPRENLIGGDEDFVVIELGSDHDRSQNLQERGNALEL 243

Query: 861  PA--------------NKIVKKRSKKIGFCHSSMGDECIDIRVKDERLSVQPIRRSFSMD 998
            P                 + KK++ K+    +SMGDECIDIR KD++ SVQPIRRSFSMD
Sbjct: 244  PTCPISPSSPRKLLEHRNVQKKKTMKLQKV-TSMGDECIDIRAKDDQFSVQPIRRSFSMD 302

Query: 999  SATDRQLYLAVQEIV-NQNKNGN 1064
            S+ DRQ YLAVQE + +QN+  N
Sbjct: 303  SSGDRQFYLAVQEALRHQNRQVN 325


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