BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038277
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g...   182   2e-44
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi...   182   2e-44
gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]...   171   7e-41
gb|ABB47537.2| retrotransposon protein, putative, unclassified [...   169   3e-40
gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subc...   169   3e-40

>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
           gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
           Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 1427

 Score =  182 bits (463), Expect = 2e-44
 Identities = 81/151 (53%), Positives = 111/151 (73%)
 Frame = -1

Query: 457 MTMKVKWAANRLYKVILKDACGTCLLTKADEMTWLWQSRLGHVNFNSMNLMCKNKMAYGL 278
           + M+V+   NRLY++ LK A   CLLT+ DE  WLW +RLGHVNF +M L+    MA G+
Sbjct: 460 LVMRVRRTPNRLYRIELKLATPVCLLTRMDEPAWLWHARLGHVNFQAMKLLADKGMAGGI 519

Query: 277 AVFTHPKEICKGCLMSKQARRPFPSQSDFSAKECLELIHGDICGPISPPTQAGNRYFLLF 98
              THP ++C+ CL++KQ R+PFP+ ++F A+E LEL+H D+CGPI+P T AGNRYF+L 
Sbjct: 520 PAITHPNQLCQACLVAKQIRQPFPATANFRAEEPLELLHIDLCGPITPTTMAGNRYFMLI 579

Query: 97  VDDFSRAMWVYMLRTKDEALAHFRKFKAQVE 5
           VDDFSR MW+++++TKD+AL  F KFK   E
Sbjct: 580 VDDFSRWMWMFVIKTKDQALEAFTKFKPLAE 610


>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
          Length = 1427

 Score =  182 bits (463), Expect = 2e-44
 Identities = 81/151 (53%), Positives = 111/151 (73%)
 Frame = -1

Query: 457 MTMKVKWAANRLYKVILKDACGTCLLTKADEMTWLWQSRLGHVNFNSMNLMCKNKMAYGL 278
           + M+V+   NRLY++ LK A   CLLT+ DE  WLW +RLGHVNF +M L+    MA G+
Sbjct: 460 LVMRVRRTPNRLYRIELKLATPVCLLTRMDEPAWLWHARLGHVNFQAMKLLADKGMAGGI 519

Query: 277 AVFTHPKEICKGCLMSKQARRPFPSQSDFSAKECLELIHGDICGPISPPTQAGNRYFLLF 98
              THP ++C+ CL++KQ R+PFP+ ++F A+E LEL+H D+CGPI+P T AGNRYF+L 
Sbjct: 520 PAITHPNQLCQACLVAKQIRQPFPATANFRAEEPLELLHIDLCGPITPTTMAGNRYFMLI 579

Query: 97  VDDFSRAMWVYMLRTKDEALAHFRKFKAQVE 5
           VDDFSR MW+++++TKD+AL  F KFK   E
Sbjct: 580 VDDFSRWMWMFVIKTKDQALEAFTKFKPLAE 610


>gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|108710383|gb|ABF98178.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1339

 Score =  171 bits (432), Expect = 7e-41
 Identities = 74/151 (49%), Positives = 109/151 (72%)
 Frame = -1

Query: 457 MTMKVKWAANRLYKVILKDACGTCLLTKADEMTWLWQSRLGHVNFNSMNLMCKNKMAYGL 278
           + MKV+ ++NRLY++ L+ A   CLL   D+  WLW +RLGHVNF+++ L+   +MA G+
Sbjct: 413 LVMKVRRSSNRLYRIELQLASPVCLLASLDDPAWLWHARLGHVNFHALKLLVDKEMAAGV 472

Query: 277 AVFTHPKEICKGCLMSKQARRPFPSQSDFSAKECLELIHGDICGPISPPTQAGNRYFLLF 98
               HP ++C+ CL++KQ R+PFP  +++ A+  LEL+H D+CGPI+P T  GNRYF+L 
Sbjct: 473 PAVHHPNQLCQACLVAKQVRQPFPGMANYLAEAPLELLHMDLCGPITPSTFTGNRYFMLI 532

Query: 97  VDDFSRAMWVYMLRTKDEALAHFRKFKAQVE 5
           VDDFS  MWV+++++KD+ALA F KFK   E
Sbjct: 533 VDDFSHWMWVFVIKSKDQALAAFEKFKPLAE 563


>gb|ABB47537.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1172

 Score =  169 bits (427), Expect = 3e-40
 Identities = 73/147 (49%), Positives = 106/147 (72%)
 Frame = -1

Query: 457 MTMKVKWAANRLYKVILKDACGTCLLTKADEMTWLWQSRLGHVNFNSMNLMCKNKMAYGL 278
           + MKV+  +NRLY++ L+ A   CLL   D   WLW +R+GHVNF+++ L+   +MA G+
Sbjct: 307 LVMKVRRTSNRLYRIELQLASQVCLLASLDNPAWLWHARIGHVNFHALKLLVDKEMASGV 366

Query: 277 AVFTHPKEICKGCLMSKQARRPFPSQSDFSAKECLELIHGDICGPISPPTQAGNRYFLLF 98
               HP ++C+ CL++KQ R+PFP  +++ A+  LEL+H D+CGPI+P T AGNRYF+L 
Sbjct: 367 PTVHHPNQLCQACLVAKQVRQPFPGMANYRAEAPLELLHMDLCGPITPSTFAGNRYFMLI 426

Query: 97  VDDFSRAMWVYMLRTKDEALAHFRKFK 17
           VDDFS  MWV++++ KD+ALA F KFK
Sbjct: 427 VDDFSNWMWVFVIKLKDQALAVFEKFK 453


>gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1303

 Score =  169 bits (427), Expect = 3e-40
 Identities = 76/151 (50%), Positives = 108/151 (71%)
 Frame = -1

Query: 457 MTMKVKWAANRLYKVILKDACGTCLLTKADEMTWLWQSRLGHVNFNSMNLMCKNKMAYGL 278
           + +KV+  +NRLY++ L+ A   CLLT   +  WLW +RLGHVNF ++ L+   +MA G+
Sbjct: 453 LVIKVRRTSNRLYRIELQLASPVCLLTSLGDPAWLWHARLGHVNFQTLKLLVDKEMAAGV 512

Query: 277 AVFTHPKEICKGCLMSKQARRPFPSQSDFSAKECLELIHGDICGPISPPTQAGNRYFLLF 98
               HP ++C+ CLM+KQ R+PFP+ +++ A+  LEL+H D+CGPI+P T A NRYFLL 
Sbjct: 513 PQVHHPNQLCQACLMAKQIRQPFPAMANYRAEAPLELLHMDLCGPITPSTFAVNRYFLLI 572

Query: 97  VDDFSRAMWVYMLRTKDEALAHFRKFKAQVE 5
           VDDFSR MWV++++TKD+AL  F KFK   E
Sbjct: 573 VDDFSRWMWVFVIKTKDQALEMFAKFKPLAE 603