BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038272
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    99   5e-19
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    83   1e-14
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    78   3e-13
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    75   7e-12
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...    71   6e-11

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 51/95 (53%), Positives = 68/95 (71%)
 Frame = -3

Query: 322 RVIQKQKK*VISL*PTYYIASGQKINLEKSEVSFSRNISLNMQNMLQEKLQLKAVKEHER 143
           R  +++ + V+ +  TY  ASGQK+N+EKSE+S+SRN+  +  N LQ KL  K V+ HE+
Sbjct: 699 RATEEEVENVMDILSTYEAASGQKLNMEKSEMSYSRNLEPDKINTLQMKLAFKTVEGHEK 758

Query: 142 YLGLPTFIGRSKKSIFQTIQDRV*KKNQRLEGKML 38
           YLGLPTFIG SKK +FQ IQDRV KK +  +GK L
Sbjct: 759 YLGLPTFIGSSKKRVFQAIQDRVWKKLKGWKGKYL 793


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 82.8 bits (203), Expect(2) = 1e-14
 Identities = 40/86 (46%), Positives = 61/86 (70%)
 Frame = -3

Query: 295 VISL*PTYYIASGQKINLEKSEVSFSRNISLNMQNMLQEKLQLKAVKEHERYLGLPTFIG 116
           ++ +   Y +ASGQKIN EKSEVS+SR +S++ ++ L   L ++ V  HE+YLG+P+  G
Sbjct: 703 IVDILNQYELASGQKINYEKSEVSYSRGVSVSQKDELTNILNMRQVDRHEKYLGIPSISG 762

Query: 115 RSKKSIFQTIQDRV*KKNQRLEGKML 38
           RSKK+IF ++ DR+ KK Q  + K+L
Sbjct: 763 RSKKAIFDSLIDRIWKKLQGWKEKLL 788



 Score = 21.6 bits (44), Expect(2) = 1e-14
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -1

Query: 45  RCLSIVGREVLLKSV 1
           + LS  G+EVLLKSV
Sbjct: 786 KLLSRAGKEVLLKSV 800


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 78.2 bits (191), Expect(2) = 3e-13
 Identities = 38/86 (44%), Positives = 58/86 (67%)
 Frame = -3

Query: 295 VISL*PTYYIASGQKINLEKSEVSFSRNISLNMQNMLQEKLQLKAVKEHERYLGLPTFIG 116
           ++ +   Y  ASGQKIN +KSEVSFS+ +S+  +  L   LQ+K V+ H +YLG+P+  G
Sbjct: 703 IVEILNLYEQASGQKINYDKSEVSFSKGVSIAQKEELSNILQMKQVERHMKYLGIPSITG 762

Query: 115 RSKKSIFQTIQDRV*KKNQRLEGKML 38
           RS+ +IF ++ DR+ KK Q  + K+L
Sbjct: 763 RSRTAIFDSLMDRIWKKLQGWKEKLL 788



 Score = 21.2 bits (43), Expect(2) = 3e-13
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 45  RCLSIVGREVLLKSV 1
           + LS  G+E+LLKSV
Sbjct: 786 KLLSRAGKEILLKSV 800


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/86 (44%), Positives = 55/86 (63%)
 Frame = -3

Query: 295 VISL*PTYYIASGQKINLEKSEVSFSRNISLNMQNMLQEKLQLKAVKEHERYLGLPTFIG 116
           ++ +   Y  ASGQKIN EKSEVSFSR +S   +  L   L ++ V  H++YLG+P   G
Sbjct: 706 IVDILNKYEAASGQKINYEKSEVSFSRGVSCEKKEELITLLHMRQVDRHQKYLGIPALCG 765

Query: 115 RSKKSIFQTIQDRV*KKNQRLEGKML 38
           RSKK +F+ + DR+ KK +  + K+L
Sbjct: 766 RSKKVLFRELLDRMWKKLRGWKEKLL 791


>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 653

 Score = 70.9 bits (172), Expect(2) = 6e-11
 Identities = 39/85 (45%), Positives = 52/85 (61%)
 Frame = -3

Query: 277 TYYIASGQKINLEKSEVSFSRNISLNMQNMLQEKLQLKAVKEHERYLGLPTFIGRSKKSI 98
           TY  AS Q IN++KSE+ FSRN+ +  +N L   L +       +YLGLP+ IGRSKKSI
Sbjct: 297 TYANASDQLINMQKSEIYFSRNVPVTKKNTLSNMLWVSEGIGIRKYLGLPSMIGRSKKSI 356

Query: 97  FQTIQDRV*KKNQRLEGKMLIYSRK 23
           F  I+DR+  +   L  KML  + K
Sbjct: 357 FNYIKDRIWNRISGLSSKMLSQAGK 381



 Score = 20.8 bits (42), Expect(2) = 6e-11
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 45  RCLSIVGREVLLKSV 1
           + LS  G+EVL+KSV
Sbjct: 374 KMLSQAGKEVLIKSV 388