BLASTX nr result

ID: Cnidium21_contig00038254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038254
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322991.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
gb|AFK42914.1| unknown [Lotus japonicus]                              135   3e-30
ref|XP_002263020.1| PREDICTED: succinate/fumarate mitochondrial ...   134   8e-30
ref|XP_003544232.1| PREDICTED: succinate/fumarate mitochondrial ...   133   2e-29
ref|XP_003519192.1| PREDICTED: succinate/fumarate mitochondrial ...   133   2e-29

>ref|XP_002322991.1| predicted protein [Populus trichocarpa] gi|222867621|gb|EEF04752.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  139 bits (349), Expect = 3e-31
 Identities = 68/83 (81%), Positives = 74/83 (89%)
 Frame = -1

Query: 249 MSQPPNEPSKTIPIPPYMKAISGSIGGIVEASCLQPIDVIKTRLQLDRSGSYKGIIHCGN 70
           MSQ  +   K   IPPYMKAISGS+GG VEASCLQPIDVIKTRLQLDRSG+YKGIIHCG+
Sbjct: 1   MSQESSNDKKPT-IPPYMKAISGSLGGAVEASCLQPIDVIKTRLQLDRSGNYKGIIHCGS 59

Query: 69  TVVKSEGVRALWKGLTPFATHLT 1
           T+VK+EGVRALWKGLTPFATHLT
Sbjct: 60  TIVKTEGVRALWKGLTPFATHLT 82



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
 Frame = -1

Query: 210 IPPYMKAISGSIGGIVEASCLQPIDVIKTRLQLD-RSGS---YKGIIHCGNTVVKSEGVR 43
           + P+   ISG + G     C  P DV+KTRL    R G    YKG++H   T+   EG+ 
Sbjct: 210 LQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSREGGELKYKGMVHAIRTIYAEEGLL 269

Query: 42  ALWKGLTP 19
           ALWKGL P
Sbjct: 270 ALWKGLLP 277


>gb|AFK42914.1| unknown [Lotus japonicus]
          Length = 313

 Score =  135 bits (341), Expect = 3e-30
 Identities = 63/83 (75%), Positives = 75/83 (90%)
 Frame = -1

Query: 249 MSQPPNEPSKTIPIPPYMKAISGSIGGIVEASCLQPIDVIKTRLQLDRSGSYKGIIHCGN 70
           ++Q    P K+IP  PY+KAISGS+GG+VEASCLQPIDVIKTRLQLDRSG+YKGI+HCG+
Sbjct: 5   VAQDNTHPKKSIP--PYLKAISGSLGGVVEASCLQPIDVIKTRLQLDRSGNYKGIVHCGS 62

Query: 69  TVVKSEGVRALWKGLTPFATHLT 1
           T+ ++EGVRALWKGLTPFATHLT
Sbjct: 63  TISRTEGVRALWKGLTPFATHLT 85



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/68 (45%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
 Frame = -1

Query: 210 IPPYMKAISGSIGGIVEASCLQPIDVIKTRLQLD-RSGS---YKGIIHCGNTVVKSEGVR 43
           + P+   ISG + G     C  P DV+KTRL    R G    YKG+IH   T+   EG+R
Sbjct: 213 LQPWQSMISGFLAGTAGPFCTGPFDVVKTRLMAQSREGGELKYKGMIHAIRTIYSEEGLR 272

Query: 42  ALWKGLTP 19
           ALWKGL P
Sbjct: 273 ALWKGLLP 280


>ref|XP_002263020.1| PREDICTED: succinate/fumarate mitochondrial transporter [Vitis
           vinifera] gi|147857058|emb|CAN81800.1| hypothetical
           protein VITISV_020062 [Vitis vinifera]
           gi|296081115|emb|CBI18247.3| unnamed protein product
           [Vitis vinifera]
          Length = 306

 Score =  134 bits (337), Expect = 8e-30
 Identities = 64/75 (85%), Positives = 69/75 (92%)
 Frame = -1

Query: 225 SKTIPIPPYMKAISGSIGGIVEASCLQPIDVIKTRLQLDRSGSYKGIIHCGNTVVKSEGV 46
           SK   IPPY+KA+SGSIGGIVEASCLQPIDVIKTRLQLD SG+YKGIIHCG TV ++EGV
Sbjct: 4   SKKTTIPPYVKALSGSIGGIVEASCLQPIDVIKTRLQLDTSGTYKGIIHCGATVYRTEGV 63

Query: 45  RALWKGLTPFATHLT 1
           RALWKGLTPFATHLT
Sbjct: 64  RALWKGLTPFATHLT 78



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
 Frame = -1

Query: 210 IPPYMKAISGSIGGIVEASCLQPIDVIKTRLQLD-RSGS---YKGIIHCGNTVVKSEGVR 43
           + P+   ISG + G     C  P DV+KTRL    R+G    YKG++H   T+   EG+ 
Sbjct: 206 LQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQGRAGGKLKYKGMVHAIRTIFAEEGLL 265

Query: 42  ALWKGLTP 19
           ALWKGL P
Sbjct: 266 ALWKGLLP 273


>ref|XP_003544232.1| PREDICTED: succinate/fumarate mitochondrial transporter-like
           [Glycine max]
          Length = 392

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/70 (87%), Positives = 68/70 (97%)
 Frame = -1

Query: 210 IPPYMKAISGSIGGIVEASCLQPIDVIKTRLQLDRSGSYKGIIHCGNTVVKSEGVRALWK 31
           IPPYMKAISGS+GGI+EASCLQPIDVIKTRLQLDRSG+YKGI+HCG T+ ++EGVRALWK
Sbjct: 94  IPPYMKAISGSLGGIMEASCLQPIDVIKTRLQLDRSGNYKGILHCGATISRTEGVRALWK 153

Query: 30  GLTPFATHLT 1
           GLTPFATHLT
Sbjct: 154 GLTPFATHLT 163



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
 Frame = -1

Query: 210 IPPYMKAISGSIGGIVEASCLQPIDVIKTRLQLD-RSGS----YKGIIHCGNTVVKSEGV 46
           + P+   ISG + G     C  P DV+KTRL    R G     YKG+IH   T+   EG+
Sbjct: 291 LQPWQSMISGFLAGTAGPICTGPFDVVKTRLMAQSREGGGVLKYKGMIHAIRTIYAEEGL 350

Query: 45  RALWKGLTP 19
            ALWKGL P
Sbjct: 351 LALWKGLLP 359


>ref|XP_003519192.1| PREDICTED: succinate/fumarate mitochondrial transporter-like
           [Glycine max]
          Length = 334

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/70 (87%), Positives = 68/70 (97%)
 Frame = -1

Query: 210 IPPYMKAISGSIGGIVEASCLQPIDVIKTRLQLDRSGSYKGIIHCGNTVVKSEGVRALWK 31
           IPPYMKAISGS+GGI+EASCLQPIDVIKTRLQLDRSG+YKGI+HCG T+ ++EGVRALWK
Sbjct: 36  IPPYMKAISGSLGGIMEASCLQPIDVIKTRLQLDRSGNYKGILHCGATISRTEGVRALWK 95

Query: 30  GLTPFATHLT 1
           GLTPFATHLT
Sbjct: 96  GLTPFATHLT 105



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/67 (44%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
 Frame = -1

Query: 204 PYMKAISGSIGGIVEASCLQPIDVIKTRLQLD-RSGS----YKGIIHCGNTVVKSEGVRA 40
           P+   ISG + G     C  P DV+KTRL    R G     YKG+IH   T+   EG+ A
Sbjct: 235 PWQSMISGFLAGTAGPICTGPFDVVKTRLMAQTREGGGVLKYKGMIHAIRTIYVEEGLLA 294

Query: 39  LWKGLTP 19
           LWKGL P
Sbjct: 295 LWKGLLP 301


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