BLASTX nr result

ID: Cnidium21_contig00038241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038241
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273330.1| PREDICTED: uncharacterized protein LOC100261...    97   2e-18
ref|XP_003551261.1| PREDICTED: uncharacterized protein LOC100775...    95   7e-18
ref|XP_002318564.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|XP_002511983.1| conserved hypothetical protein [Ricinus comm...    84   2e-14
gb|AFK48378.1| unknown [Medicago truncatula]                           79   4e-13

>ref|XP_002273330.1| PREDICTED: uncharacterized protein LOC100261105 [Vitis vinifera]
          Length = 154

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 64/152 (42%), Positives = 82/152 (53%), Gaps = 47/152 (30%)
 Frame = -1

Query: 500 MFRRTPEH------------RLAVAVRGSVTSLWSLLTKHASRTSRK------------- 396
           M R +PEH            ++A  +  SV++L +  +K ASR S K             
Sbjct: 1   MARHSPEHDIGSNTGFGTSKKVASGLLHSVSTLVASCSKQASRVSSKFRTKVSHSKISPK 60

Query: 395 --------LMSAIKNKAIKLRRKKRG---------AGEDF-DGGVWQRTILMGDKCEPLD 270
                   L+++I NKAI    KK+G         A E F DGGVWQR ILMGDKC+PLD
Sbjct: 61  SPLARPKQLLTSISNKAIPFLHKKKGGEQLDSKEVAEEGFGDGGVWQRAILMGDKCQPLD 120

Query: 269 FSGVIYYDHDGNRVNEL----PRASPMPSYAY 186
           FSGVIYYD+ G ++ EL    PRASP+PSYA+
Sbjct: 121 FSGVIYYDNKGEQLQELPLRSPRASPLPSYAF 152


>ref|XP_003551261.1| PREDICTED: uncharacterized protein LOC100775409 [Glycine max]
          Length = 132

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/79 (58%), Positives = 58/79 (73%), Gaps = 4/79 (5%)
 Frame = -1

Query: 410 RTSRKLMSAIKNKAIKLRRKKRGAGEDFDGGVWQRTILMGDKCEPLDFSGVIYYDHDGNR 231
           R+ +KL+S I +K +  R+KKRG  +   GGVWQ+ ILMGDKCEPLDFSGVIYYD +G +
Sbjct: 45  RSPKKLLSNISSKTLPFRKKKRGEEDWGKGGVWQKAILMGDKCEPLDFSGVIYYDSNGKQ 104

Query: 230 VNEL----PRASPMPSYAY 186
           VNE+    PRASP+P   Y
Sbjct: 105 VNEMPLRSPRASPVPPGYY 123


>ref|XP_002318564.1| predicted protein [Populus trichocarpa] gi|222859237|gb|EEE96784.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 57/143 (39%), Positives = 71/143 (49%), Gaps = 48/143 (33%)
 Frame = -1

Query: 476 RLAVAVRGSVTSLWSLLTKHASRTSRKLMSA----------------------------- 384
           RL+     S++ L +L  KHASR S KL +A                             
Sbjct: 18  RLSPGFLVSISCLMALCAKHASRVSSKLKTANKPTYKNNCSTINKSPRHSPRLPLARPKQ 77

Query: 383 ----IKNKAIKLRRKKR-----------GAGEDFDGGVWQRTILMGDKCEPLDFSGVIYY 249
               I NKAI L  ++R           G  E  DGGVWQ+ ILMGDKC+PLDFSGVIYY
Sbjct: 78  LLTQISNKAITLMHRRRKDDRENVDVLLGPDEFGDGGVWQKAILMGDKCQPLDFSGVIYY 137

Query: 248 DHDGNRVNEL----PRASPMPSY 192
           D  G ++NE+    PRASP+P+Y
Sbjct: 138 DGSGKQLNEVPLKSPRASPLPAY 160


>ref|XP_002511983.1| conserved hypothetical protein [Ricinus communis]
           gi|223549163|gb|EEF50652.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 171

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 56/146 (38%), Positives = 69/146 (47%), Gaps = 51/146 (34%)
 Frame = -1

Query: 476 RLAVAVRGSVTSLWSLLTKHASRTSRKLMSA----------------------------- 384
           RL +    S++SL ++  KHA R S KL +A                             
Sbjct: 21  RLTLGFLMSISSLMAICAKHAGRVSNKLKTASFKTSHHHHRDHEGHKSPKLLLLSPKSPL 80

Query: 383 ---------IKNKAIKL--RRKKRGAGEDF-------DGGVWQRTILMGDKCEPLDFSGV 258
                    I NKAI     +KKR    D        DGGVWQ+ ILMGDKC+PLDFSGV
Sbjct: 81  VRPKQLLTQISNKAITFVHSKKKRDGTADVVAPDEFGDGGVWQKAILMGDKCQPLDFSGV 140

Query: 257 IYYDHDGNRVNEL----PRASPMPSY 192
           IYYD  G ++N+L    PRASP+P Y
Sbjct: 141 IYYDSCGKQLNQLPLRSPRASPLPGY 166


>gb|AFK48378.1| unknown [Medicago truncatula]
          Length = 153

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 43/82 (52%), Positives = 54/82 (65%), Gaps = 12/82 (14%)
 Frame = -1

Query: 401 RKLMSAIKNKAI--------KLRRKKRGAGEDFDGGVWQRTILMGDKCEPLDFSGVIYYD 246
           +KL+S I NKA+        +  R+K G G   +GGVWQ+ ILMG KCEPLDFSGVIYYD
Sbjct: 71  KKLLSNISNKALSQFGKKKQREEREKEGWG---NGGVWQKEILMGGKCEPLDFSGVIYYD 127

Query: 245 HDGNRVNEL----PRASPMPSY 192
            +G +  E+    PRASP+P Y
Sbjct: 128 INGKQTREVPIRSPRASPLPGY 149


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