BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038236
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633453.1| PREDICTED: uncharacterized RNA pseudouridine...    82   6e-14
ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine...    82   6e-14
ref|XP_002516391.1| ribosomal large subunit pseudouridine syntha...    80   2e-13
ref|XP_002311995.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
ref|XP_003536335.1| PREDICTED: uncharacterized RNA pseudouridine...    77   1e-12

>ref|XP_003633453.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464
           isoform 2 [Vitis vinifera]
          Length = 335

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 56/124 (45%), Positives = 71/124 (57%), Gaps = 9/124 (7%)
 Frame = -2

Query: 346 SLHHLSRPFILKSRYLHTLITCSS------SSSNFNITFAXXXXXXXXXPNQHSDFAQQL 185
           S  HLSRP + + R+  T+   SS      +S+ FNI+FA                ++ L
Sbjct: 20  SSFHLSRPSLAR-RHFRTIPVRSSISPPSTTSAEFNISFAPKSKNPKPQ-------SETL 71

Query: 184 YIPWIVRDENGNLTLQSTPPARLLDAISDAKTGSPVSNKKKKKQEGLS---TPEPKYSKA 14
            IPWIVRDENGNL +QSTPP R L  ++ AK  S  + KKKKK+E  +     EPKYSKA
Sbjct: 72  LIPWIVRDENGNLRVQSTPPERYLQDMAKAKALS--AKKKKKKEESTARAVAVEPKYSKA 129

Query: 13  ARRF 2
           ARRF
Sbjct: 130 ARRF 133


>ref|XP_002270186.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464
           isoform 1 [Vitis vinifera]
          Length = 393

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 56/124 (45%), Positives = 71/124 (57%), Gaps = 9/124 (7%)
 Frame = -2

Query: 346 SLHHLSRPFILKSRYLHTLITCSS------SSSNFNITFAXXXXXXXXXPNQHSDFAQQL 185
           S  HLSRP + + R+  T+   SS      +S+ FNI+FA                ++ L
Sbjct: 20  SSFHLSRPSLAR-RHFRTIPVRSSISPPSTTSAEFNISFAPKSKNPKPQ-------SETL 71

Query: 184 YIPWIVRDENGNLTLQSTPPARLLDAISDAKTGSPVSNKKKKKQEGLS---TPEPKYSKA 14
            IPWIVRDENGNL +QSTPP R L  ++ AK  S  + KKKKK+E  +     EPKYSKA
Sbjct: 72  LIPWIVRDENGNLRVQSTPPERYLQDMAKAKALS--AKKKKKKEESTARAVAVEPKYSKA 129

Query: 13  ARRF 2
           ARRF
Sbjct: 130 ARRF 133


>ref|XP_002516391.1| ribosomal large subunit pseudouridine synthase B, putative [Ricinus
           communis] gi|223544489|gb|EEF46008.1| ribosomal large
           subunit pseudouridine synthase B, putative [Ricinus
           communis]
          Length = 315

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 61/134 (45%), Positives = 76/134 (56%), Gaps = 18/134 (13%)
 Frame = -2

Query: 349 TSLHHL-----SRPFILKSRYLHTL--ITCSSSSSN------FNITFAXXXXXXXXXPNQ 209
           +SLH +     S+P +   + + +L  ITCSSSSS+      FNI+FA         P  
Sbjct: 8   SSLHSIQNLIFSKPSVALLKPIRSLPRITCSSSSSSSSSSLEFNISFAPPKPKPKSPPQL 67

Query: 208 H-SDFAQQLYIPWIVRDENGNLTLQSTPPARLLDAISDAKT-GSPVSNKKKKKQEGLSTP 35
             SD   QL+IPWIVR E+GNL LQS PPARL+ A++DAKT  +   NK KK      TP
Sbjct: 68  DLSDQEGQLFIPWIVRGEDGNLKLQSHPPARLIHALADAKTHNTKKQNKVKKVAAAAPTP 127

Query: 34  EPK---YSKAARRF 2
             K    SKAARRF
Sbjct: 128 AVKDRHLSKAARRF 141


>ref|XP_002311995.1| predicted protein [Populus trichocarpa] gi|222851815|gb|EEE89362.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 50/104 (48%), Positives = 58/104 (55%), Gaps = 12/104 (11%)
 Frame = -2

Query: 277 SSSSNFNITFAXXXXXXXXXPNQHSDFAQ------QLYIPWIVRDENGNLTLQSTPPARL 116
           ++S  FNITFA          N  +D A       QL+IPWIVR E+GNL LQS PPARL
Sbjct: 35  TASLEFNITFAPPKPKPKLPANLQTDAASLSLPPGQLFIPWIVRGEDGNLKLQSNPPARL 94

Query: 115 LDAISDAKTGSPVSNKKKKKQEGLST------PEPKYSKAARRF 2
           + AI+DAKT  P   K K K+E           EP  SKAARRF
Sbjct: 95  IHAIADAKT-QPKKKKDKVKKESSGNVKAKLEAEPTRSKAARRF 137


>ref|XP_003536335.1| PREDICTED: uncharacterized RNA pseudouridine synthase aq_1464-like
           [Glycine max]
          Length = 399

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 49/108 (45%), Positives = 63/108 (58%), Gaps = 12/108 (11%)
 Frame = -2

Query: 289 ITCSSSSS-NFNITFAXXXXXXXXXPNQHSDFAQQLYIPWIVRDENGNLTLQSTPPARLL 113
           +TCS SSS  FNI+FA         P+  ++    L IPWIVR E+GNL LQS PP  LL
Sbjct: 31  LTCSFSSSIKFNISFAPPKPKPKPEPDASNEPDGPLLIPWIVRGEDGNLRLQSEPPPSLL 90

Query: 112 DAISDAKTGSPVSNKK-----------KKKQEGLSTPEPKYSKAARRF 2
           +AI+ A+TG+   NK+            K Q+  ST  P++SKAARRF
Sbjct: 91  NAIATAQTGTKKDNKQTKTTAATATNTTKPQKARSTAPPQHSKAARRF 138