BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038229
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   220   8e-56
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              220   8e-56
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   220   8e-56
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin...   219   2e-55
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   218   3e-55

>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D
           subunit 1-like [Vitis vinifera]
          Length = 1560

 Score =  220 bits (561), Expect = 8e-56
 Identities = 105/166 (63%), Positives = 133/166 (80%), Gaps = 4/166 (2%)
 Frame = -3

Query: 489 APKLSGLKFIKELILGKRSDHTFRMVVVGDPSIKVEEIGVPCHIAEAMQISEQLYSQNWE 310
           A K+SGLK+IKE++LGKR++H+FRM+VVGDP +++ EIG+PCHIAE + ISE L S NWE
Sbjct: 334 ASKMSGLKWIKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIPCHIAEELLISEHLNSWNWE 393

Query: 309 SL----GLRILTKRETFVRREGRLVRVTIKDDKLRIGDTVHRPLRDGDIVLINRPPSIHS 142
            +     LR+L K +T+VRR+G L  V   +D  + GD ++RPL DGDIVLINRPPSIH 
Sbjct: 394 KVTNGCNLRLLEKGQTYVRRKGTLAPVRRMND-FQAGDIIYRPLTDGDIVLINRPPSIHQ 452

Query: 141 HSLIALYVKILPTKSILSLNPLICSPFRGDFDGDCYHGYVPQSVDS 4
           HS+IAL VK+LP  S++S+NPL CSPFRGDFDGDC HGY+PQSVDS
Sbjct: 453 HSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIPQSVDS 498


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  220 bits (561), Expect = 8e-56
 Identities = 105/166 (63%), Positives = 133/166 (80%), Gaps = 4/166 (2%)
 Frame = -3

Query: 489 APKLSGLKFIKELILGKRSDHTFRMVVVGDPSIKVEEIGVPCHIAEAMQISEQLYSQNWE 310
           A K+SGLK+IKE++LGKR++H+FRM+VVGDP +++ EIG+PCHIAE + ISE L S NWE
Sbjct: 277 ASKMSGLKWIKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIPCHIAEELLISEHLNSWNWE 336

Query: 309 SL----GLRILTKRETFVRREGRLVRVTIKDDKLRIGDTVHRPLRDGDIVLINRPPSIHS 142
            +     LR+L K +T+VRR+G L  V   +D  + GD ++RPL DGDIVLINRPPSIH 
Sbjct: 337 KVTNGCNLRLLEKGQTYVRRKGTLAPVRRMND-FQAGDIIYRPLTDGDIVLINRPPSIHQ 395

Query: 141 HSLIALYVKILPTKSILSLNPLICSPFRGDFDGDCYHGYVPQSVDS 4
           HS+IAL VK+LP  S++S+NPL CSPFRGDFDGDC HGY+PQSVDS
Sbjct: 396 HSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIPQSVDS 441


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  220 bits (561), Expect = 8e-56
 Identities = 105/166 (63%), Positives = 133/166 (80%), Gaps = 4/166 (2%)
 Frame = -3

Query: 489 APKLSGLKFIKELILGKRSDHTFRMVVVGDPSIKVEEIGVPCHIAEAMQISEQLYSQNWE 310
           A K+SGLK+IKE++LGKR++H+FRM+VVGDP +++ EIG+PCHIAE + ISE L S NWE
Sbjct: 304 ASKMSGLKWIKEVLLGKRTNHSFRMIVVGDPKLRLSEIGIPCHIAEELLISEHLNSWNWE 363

Query: 309 SL----GLRILTKRETFVRREGRLVRVTIKDDKLRIGDTVHRPLRDGDIVLINRPPSIHS 142
            +     LR+L K +T+VRR+G L  V   +D  + GD ++RPL DGDIVLINRPPSIH 
Sbjct: 364 KVTNGCNLRLLEKGQTYVRRKGTLAPVRRMND-FQAGDIIYRPLTDGDIVLINRPPSIHQ 422

Query: 141 HSLIALYVKILPTKSILSLNPLICSPFRGDFDGDCYHGYVPQSVDS 4
           HS+IAL VK+LP  S++S+NPL CSPFRGDFDGDC HGY+PQSVDS
Sbjct: 423 HSVIALSVKVLPLNSVVSINPLCCSPFRGDFDGDCLHGYIPQSVDS 468


>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 1475

 Score =  219 bits (558), Expect = 2e-55
 Identities = 106/162 (65%), Positives = 133/162 (82%), Gaps = 4/162 (2%)
 Frame = -3

Query: 477 SGLKFIKELILGKRSDHTFRMVVVGDPSIKVEEIGVPCHIAEAMQISEQLYSQNWESLG- 301
           SGL++IK+++LGKR+D++FRMVVVGDP+IK  EIG+PC IAE +QISE L + NW+ L  
Sbjct: 311 SGLRWIKDVVLGKRNDNSFRMVVVGDPNIKFSEIGIPCPIAERLQISEHLTTWNWDKLNT 370

Query: 300 ---LRILTKRETFVRREGRLVRVTIKDDKLRIGDTVHRPLRDGDIVLINRPPSIHSHSLI 130
              +R+L K +  VRREG+LVRV  +  +LRIGD ++RPL DGD VLINRPPSIH HSLI
Sbjct: 371 CCEVRLLEKGDMHVRREGKLVRVR-RTKELRIGDIIYRPLNDGDTVLINRPPSIHQHSLI 429

Query: 129 ALYVKILPTKSILSLNPLICSPFRGDFDGDCYHGYVPQSVDS 4
           AL VK+LP  S+L++NPLIC+PFRGDFDGDC HGYVPQSVD+
Sbjct: 430 ALSVKVLPATSVLAINPLICAPFRGDFDGDCLHGYVPQSVDT 471


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
           sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
           QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
           1-like [Cucumis sativus]
          Length = 1469

 Score =  218 bits (556), Expect = 3e-55
 Identities = 107/166 (64%), Positives = 133/166 (80%), Gaps = 4/166 (2%)
 Frame = -3

Query: 489 APKLSGLKFIKELILGKRSDHTFRMVVVGDPSIKVEEIGVPCHIAEAMQISEQLYSQNWE 310
           A   SGL++IK+++LGKRSDH FRMVVVGDP+I++ EIG+PCH+AE +QISE L S N +
Sbjct: 313 ATSSSGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSSWNMK 372

Query: 309 SLG----LRILTKRETFVRREGRLVRVTIKDDKLRIGDTVHRPLRDGDIVLINRPPSIHS 142
            L     L ++ K E +VRREGRLVRV     +L +GDT++RPL DGDIVL+NRPPSIH 
Sbjct: 373 KLSTSCYLHLVEKGEIYVRREGRLVRVR-NVLELNMGDTIYRPLADGDIVLVNRPPSIHQ 431

Query: 141 HSLIALYVKILPTKSILSLNPLICSPFRGDFDGDCYHGYVPQSVDS 4
           HSLIAL VK+LP  ++LSLNPL CSPFRGDFDGDC HGYVPQS+++
Sbjct: 432 HSLIALSVKLLPVSAVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEA 477