BLASTX nr result

ID: Cnidium21_contig00038207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038207
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helica...   235   5e-60
emb|CBI15516.3| unnamed protein product [Vitis vinifera]              235   5e-60
ref|XP_002321501.1| predicted protein [Populus trichocarpa] gi|2...   227   1e-57
ref|XP_003524350.1| PREDICTED: probable ATP-dependent RNA helica...   219   3e-55
dbj|BAD52491.1| putative DEAD/H box polypeptide 36 protein [Oryz...   214   7e-54

>ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
           vinifera]
          Length = 1178

 Score =  235 bits (599), Expect = 5e-60
 Identities = 120/194 (61%), Positives = 149/194 (76%)
 Frame = -2

Query: 584 EKKDRRDFQQISALAARMGLCSQQYSKVIVISKVPLPNYRSDLDDRRPQREVILPYGLEE 405
           EKKDRRDF+QISALA RMGL S QYS+V+V SKVPLPNYRSDLDD+RPQREV+LP+GL+ 
Sbjct: 136 EKKDRRDFEQISALATRMGLYSCQYSRVVVFSKVPLPNYRSDLDDKRPQREVVLPFGLQR 195

Query: 404 ELVAQLKKYIVKKSTNKDFVMDNAILRSSTGGNLATNQQIYEQEEQIKRTSPGAERILQR 225
           E+ A LK+Y+ +KS +++   D  + RS  G +  T +  YEQ+E + +TS   ERIL+R
Sbjct: 196 EVHAHLKEYLSQKSMSRESFSDKTLSRS-IGNSSVTEEGFYEQQEPLTQTSVVMERILKR 254

Query: 224 RSLEILNKQQSWQNSLEGQKMQEFRKTLPAYKEKGSXXXXXXXXXXXXVSGETGCGKTTQ 45
           +SL+I N+QQ WQ S EGQKMQEFR++LPAYKE+ +            VSGETGCGKTTQ
Sbjct: 255 KSLQIRNQQQDWQESSEGQKMQEFRRSLPAYKEREALLNAISQNQVVVVSGETGCGKTTQ 314

Query: 44  LPQYILESEVEAAR 3
           LPQYILESE+EAAR
Sbjct: 315 LPQYILESEIEAAR 328


>emb|CBI15516.3| unnamed protein product [Vitis vinifera]
          Length = 1057

 Score =  235 bits (599), Expect = 5e-60
 Identities = 120/194 (61%), Positives = 149/194 (76%)
 Frame = -2

Query: 584 EKKDRRDFQQISALAARMGLCSQQYSKVIVISKVPLPNYRSDLDDRRPQREVILPYGLEE 405
           EKKDRRDF+QISALA RMGL S QYS+V+V SKVPLPNYRSDLDD+RPQREV+LP+GL+ 
Sbjct: 15  EKKDRRDFEQISALATRMGLYSCQYSRVVVFSKVPLPNYRSDLDDKRPQREVVLPFGLQR 74

Query: 404 ELVAQLKKYIVKKSTNKDFVMDNAILRSSTGGNLATNQQIYEQEEQIKRTSPGAERILQR 225
           E+ A LK+Y+ +KS +++   D  + RS  G +  T +  YEQ+E + +TS   ERIL+R
Sbjct: 75  EVHAHLKEYLSQKSMSRESFSDKTLSRS-IGNSSVTEEGFYEQQEPLTQTSVVMERILKR 133

Query: 224 RSLEILNKQQSWQNSLEGQKMQEFRKTLPAYKEKGSXXXXXXXXXXXXVSGETGCGKTTQ 45
           +SL+I N+QQ WQ S EGQKMQEFR++LPAYKE+ +            VSGETGCGKTTQ
Sbjct: 134 KSLQIRNQQQDWQESSEGQKMQEFRRSLPAYKEREALLNAISQNQVVVVSGETGCGKTTQ 193

Query: 44  LPQYILESEVEAAR 3
           LPQYILESE+EAAR
Sbjct: 194 LPQYILESEIEAAR 207


>ref|XP_002321501.1| predicted protein [Populus trichocarpa] gi|222868497|gb|EEF05628.1|
           predicted protein [Populus trichocarpa]
          Length = 1062

 Score =  227 bits (579), Expect = 1e-57
 Identities = 115/195 (58%), Positives = 145/195 (74%)
 Frame = -2

Query: 587 REKKDRRDFQQISALAARMGLCSQQYSKVIVISKVPLPNYRSDLDDRRPQREVILPYGLE 408
           REKKDRRDF  +SA+A RMGL S+QYS+++V SKVPLPNYR DLDD+RPQREVILP+GL+
Sbjct: 14  REKKDRRDFGHLSAMATRMGLHSRQYSRIVVFSKVPLPNYRHDLDDKRPQREVILPFGLQ 73

Query: 407 EELVAQLKKYIVKKSTNKDFVMDNAILRSSTGGNLATNQQIYEQEEQIKRTSPGAERILQ 228
            E+ A  K YI KK T++     N++ RS+ G ++ T+++IYE+ E   + S   ERIL 
Sbjct: 74  REVDAHFKAYISKKPTSRGLFPPNSLSRSNGGRSMDTDERIYERPELSVQNSVAMERILS 133

Query: 227 RRSLEILNKQQSWQNSLEGQKMQEFRKTLPAYKEKGSXXXXXXXXXXXXVSGETGCGKTT 48
           R+SL++ N+Q+ WQ S EGQKM EFR++LPAYKEK              VSGETGCGKTT
Sbjct: 134 RKSLQLRNQQEKWQESPEGQKMIEFRRSLPAYKEKDVLLKAISENQVIVVSGETGCGKTT 193

Query: 47  QLPQYILESEVEAAR 3
           QLPQYILESE+EAAR
Sbjct: 194 QLPQYILESEIEAAR 208


>ref|XP_003524350.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
           max]
          Length = 1180

 Score =  219 bits (557), Expect = 3e-55
 Identities = 109/195 (55%), Positives = 145/195 (74%)
 Frame = -2

Query: 587 REKKDRRDFQQISALAARMGLCSQQYSKVIVISKVPLPNYRSDLDDRRPQREVILPYGLE 408
           REKKDRRDF+Q+S LA RMGL S+QY++V+V SK PLPNYR DLDD+RPQREV+LP G+ 
Sbjct: 134 REKKDRRDFEQLSTLATRMGLYSRQYARVVVFSKAPLPNYRPDLDDKRPQREVVLPLGVH 193

Query: 407 EELVAQLKKYIVKKSTNKDFVMDNAILRSSTGGNLATNQQIYEQEEQIKRTSPGAERILQ 228
           +E+ A L  ++ +K+ NK   M++++  SS   ++  N+++YEQ E +   S   E+ILQ
Sbjct: 194 KEVDAHLLAHLSQKARNKWDFMEDSLHNSSDSRSIPANERMYEQPEPVTHNSVVKEKILQ 253

Query: 227 RRSLEILNKQQSWQNSLEGQKMQEFRKTLPAYKEKGSXXXXXXXXXXXXVSGETGCGKTT 48
           R+SL++ ++QQ WQ S EGQKM EFR++LPA+KEK +            VSGETGCGKTT
Sbjct: 254 RKSLQLHHQQQDWQESPEGQKMLEFRRSLPAFKEKDAFLRVISQSQVVVVSGETGCGKTT 313

Query: 47  QLPQYILESEVEAAR 3
           QLPQYILESE+EAAR
Sbjct: 314 QLPQYILESEIEAAR 328


>dbj|BAD52491.1| putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica
           Group]
          Length = 1063

 Score =  214 bits (546), Expect = 7e-54
 Identities = 108/195 (55%), Positives = 142/195 (72%)
 Frame = -2

Query: 587 REKKDRRDFQQISALAARMGLCSQQYSKVIVISKVPLPNYRSDLDDRRPQREVILPYGLE 408
           RE+KDRRDF+Q+S LA RMGL S+QYS+++V SKVPLPNYRSDLDD+RPQREV +P GL+
Sbjct: 14  RERKDRRDFEQLSQLAERMGLYSRQYSRIVVFSKVPLPNYRSDLDDKRPQREVSIPSGLQ 73

Query: 407 EELVAQLKKYIVKKSTNKDFVMDNAILRSSTGGNLATNQQIYEQEEQIKRTSPGAERILQ 228
            E+ A L  Y+ +K T+     + A  RSS+  + AT++   EQ++    TS   ERI +
Sbjct: 74  REVDALLSDYLARKRTSSGSFPNAAFSRSSSTDSFATDESFLEQQDNQTSTSAVIERIQR 133

Query: 227 RRSLEILNKQQSWQNSLEGQKMQEFRKTLPAYKEKGSXXXXXXXXXXXXVSGETGCGKTT 48
           R+SL++ N+Q+SWQ S +GQ M EFR++LPAYKE+ +            VSGETGCGKTT
Sbjct: 134 RKSLQLRNQQESWQESHDGQSMMEFRRSLPAYKERQTLLEAIAQNQVVVVSGETGCGKTT 193

Query: 47  QLPQYILESEVEAAR 3
           QLPQYILESE++AAR
Sbjct: 194 QLPQYILESEIDAAR 208


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