BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038202
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527661.1| pentatricopeptide repeat-containing protein,...    56   9e-15
ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-13
ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containi...    58   4e-12
ref|XP_003612846.1| Pentatricopeptide repeat-containing protein ...    50   7e-11
ref|XP_002326536.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532966|gb|EEF34732.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 766

 Score = 56.2 bits (134), Expect(2) = 9e-15
 Identities = 26/57 (45%), Positives = 36/57 (63%)
 Frame = -1

Query: 276 GLSPIIFSCKFLLKCLA*GNRVDYLLFLFDDIWNSGPVRCAYTYTIMINNYCKRHTG 106
           GL   I SC FLL C A  N+ +++  LF+++ +SGP    +TYTIM+N YCK   G
Sbjct: 208 GLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFG 264



 Score = 48.5 bits (114), Expect(2) = 9e-15
 Identities = 25/62 (40%), Positives = 38/62 (61%)
 Frame = -3

Query: 463 KVCIFCRDVVNCYHDSNLDMSCLFIRLLDLTSNVNAASSNVICDVLIKVSTSTFMLENAV 284
           +V IF RD+++ Y + NLD+S LF  LLD   + +   S ++ +VLIKV     ML +A 
Sbjct: 139 EVQIFLRDIISYYKEVNLDVSELFSTLLDSPQDAHMGGSIIVANVLIKVFAENNMLVDAA 198

Query: 283 DI 278
           D+
Sbjct: 199 DV 200


>ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
           gi|297742067|emb|CBI33854.3| unnamed protein product
           [Vitis vinifera]
          Length = 767

 Score = 57.0 bits (136), Expect(2) = 2e-13
 Identities = 28/57 (49%), Positives = 38/57 (66%)
 Frame = -1

Query: 276 GLSPIIFSCKFLLKCLA*GNRVDYLLFLFDDIWNSGPVRCAYTYTIMINNYCKRHTG 106
           GL     SC FLLKCLA  NR ++L  LF+++ ++GP    +TYTIM+N YCK + G
Sbjct: 209 GLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFG 265



 Score = 43.5 bits (101), Expect(2) = 2e-13
 Identities = 29/64 (45%), Positives = 39/64 (60%)
 Frame = -3

Query: 463 KVCIFCRDVVNCYHDSNLDMSCLFIRLLDLTSNVNAASSNVICDVLIKVSTSTFMLENAV 284
           +V    RD+V  Y+  NLD   LF  LL+  S  +AA S ++ D+LIKV  +  MLENAV
Sbjct: 142 EVYALLRDIVCYYNKVNLDAFELFPILLE--SPKDAARSVIVFDLLIKVFAANSMLENAV 199

Query: 283 DIGL 272
           D+ L
Sbjct: 200 DVFL 203


>ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score = 57.8 bits (138), Expect(2) = 4e-12
 Identities = 26/53 (49%), Positives = 37/53 (69%)
 Frame = -1

Query: 279 LGLSPIIFSCKFLLKCLA*GNRVDYLLFLFDDIWNSGPVRCAYTYTIMINNYC 121
           +GL P I +C FLLKCL   NRV+++  +F+++ + GP    YTYTIM+N YC
Sbjct: 276 VGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYC 328



 Score = 38.1 bits (87), Expect(2) = 4e-12
 Identities = 24/62 (38%), Positives = 33/62 (53%)
 Frame = -3

Query: 463 KVCIFCRDVVNCYHDSNLDMSCLFIRLLDLTSNVNAASSNVICDVLIKVSTSTFMLENAV 284
           +V    RD+V   +++  D   LF   LD   +V    S V+ DVLI V  S  MLENA+
Sbjct: 210 EVWALLRDIVGFCNEAKYDTFELFSAFLDSPQHVER--SGVVFDVLISVFASNSMLENAL 267

Query: 283 DI 278
           D+
Sbjct: 268 DV 269


>ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355514181|gb|AES95804.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 892

 Score = 50.4 bits (119), Expect(2) = 7e-11
 Identities = 25/53 (47%), Positives = 33/53 (62%)
 Frame = -1

Query: 276 GLSPIIFSCKFLLKCLA*GNRVDYLLFLFDDIWNSGPVRCAYTYTIMINNYCK 118
           G+   I SC FLLKCL   NRVD +  LF+ +   GP    +TYTIM+N +C+
Sbjct: 166 GIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCR 218



 Score = 41.2 bits (95), Expect(2) = 7e-11
 Identities = 28/72 (38%), Positives = 38/72 (52%)
 Frame = -3

Query: 463 KVCIFCRDVVNCYHDSNLDMSCLFIRLLDLTSNVNAASSNVICDVLIKVSTSTFMLENAV 284
           +V I  RD+V  Y + N D   L   LLD+        SNV+ D+LIKV  S  MLE+A 
Sbjct: 103 EVFILIRDIVTFYKEENRDAGELVSLLLDVEK------SNVVFDMLIKVFASNSMLEHA- 155

Query: 283 DIGLIPNYIFLQ 248
                 NY+F++
Sbjct: 156 ------NYVFVR 161


>ref|XP_002326536.1| predicted protein [Populus trichocarpa] gi|222833858|gb|EEE72335.1|
           predicted protein [Populus trichocarpa]
          Length = 697

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/58 (55%), Positives = 40/58 (68%)
 Frame = -1

Query: 279 LGLSPIIFSCKFLLKCLA*GNRVDYLLFLFDDIWNSGPVRCAYTYTIMINNYCKRHTG 106
           +G+   I SC FLLKCLA G++++ +  LFDD+ NSGP    YTYTIMIN YCK   G
Sbjct: 144 IGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTIMINFYCKERHG 201