BLASTX nr result
ID: Cnidium21_contig00038122
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00038122 (320 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI15151.3| unnamed protein product [Vitis vinifera] 178 5e-43 ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor... 178 5e-43 gb|AFW61762.1| putative RNA helicase family protein [Zea mays] 176 1e-42 ref|XP_003557821.1| PREDICTED: putative pre-mRNA-splicing factor... 175 3e-42 ref|XP_002453971.1| hypothetical protein SORBIDRAFT_04g022460 [S... 174 5e-42 >emb|CBI15151.3| unnamed protein product [Vitis vinifera] Length = 954 Score = 178 bits (451), Expect = 5e-43 Identities = 89/106 (83%), Positives = 98/106 (92%) Frame = -1 Query: 320 ARFRPDLKLIISSATLDAVRFSDYFDNAPIFKVPGRRFPVEIHYTKAPEADYLDAAIVTV 141 ARFRPDLKL+ISSATLDA +FSDYFD+APIFK+PGRR+PVEIHYTKAPEADYLDAAIVT Sbjct: 553 ARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIHYTKAPEADYLDAAIVTA 612 Query: 140 LHIHVTESPGDGDILVFLTGQEEIESAEEILKRRTKSLGTKIAELI 3 L IHVT+ P GDILVFLTGQEEIE+AEEI+K RT+ LGTKIAELI Sbjct: 613 LQIHVTQPP--GDILVFLTGQEEIETAEEIMKHRTRGLGTKIAELI 656 >ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16-like [Vitis vinifera] Length = 1056 Score = 178 bits (451), Expect = 5e-43 Identities = 89/106 (83%), Positives = 98/106 (92%) Frame = -1 Query: 320 ARFRPDLKLIISSATLDAVRFSDYFDNAPIFKVPGRRFPVEIHYTKAPEADYLDAAIVTV 141 ARFRPDLKL+ISSATLDA +FSDYFD+APIFK+PGRR+PVEIHYTKAPEADYLDAAIVT Sbjct: 555 ARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIHYTKAPEADYLDAAIVTA 614 Query: 140 LHIHVTESPGDGDILVFLTGQEEIESAEEILKRRTKSLGTKIAELI 3 L IHVT+ P GDILVFLTGQEEIE+AEEI+K RT+ LGTKIAELI Sbjct: 615 LQIHVTQPP--GDILVFLTGQEEIETAEEIMKHRTRGLGTKIAELI 658 >gb|AFW61762.1| putative RNA helicase family protein [Zea mays] Length = 639 Score = 176 bits (447), Expect = 1e-42 Identities = 87/106 (82%), Positives = 99/106 (93%) Frame = -1 Query: 320 ARFRPDLKLIISSATLDAVRFSDYFDNAPIFKVPGRRFPVEIHYTKAPEADYLDAAIVTV 141 +RFRPDLKL+ISSATLDA +FSDYFD+APIFK+PGRR+PVEIHYTKAPEADY+DAAIVTV Sbjct: 139 SRFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTV 198 Query: 140 LHIHVTESPGDGDILVFLTGQEEIESAEEILKRRTKSLGTKIAELI 3 L IHVT+SP GDILVFLTGQEEIE+ +EILK RT+ LGTKI+ELI Sbjct: 199 LQIHVTQSP--GDILVFLTGQEEIETVDEILKHRTRGLGTKISELI 242 >ref|XP_003557821.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16-like [Brachypodium distachyon] Length = 1051 Score = 175 bits (444), Expect = 3e-42 Identities = 86/105 (81%), Positives = 98/105 (93%) Frame = -1 Query: 320 ARFRPDLKLIISSATLDAVRFSDYFDNAPIFKVPGRRFPVEIHYTKAPEADYLDAAIVTV 141 ARFRPDLKL+ISSATLDA +FSDYFD+APIFK+PGRR+PVE+HYTKAPEADY+DAAIVTV Sbjct: 551 ARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEVHYTKAPEADYIDAAIVTV 610 Query: 140 LHIHVTESPGDGDILVFLTGQEEIESAEEILKRRTKSLGTKIAEL 6 L IHVT+ P GDILVFLTGQEEIE+ +EILK+RT+ LGTKIAEL Sbjct: 611 LQIHVTQPP--GDILVFLTGQEEIETVDEILKQRTRGLGTKIAEL 653 >ref|XP_002453971.1| hypothetical protein SORBIDRAFT_04g022460 [Sorghum bicolor] gi|241933802|gb|EES06947.1| hypothetical protein SORBIDRAFT_04g022460 [Sorghum bicolor] Length = 1088 Score = 174 bits (442), Expect = 5e-42 Identities = 86/106 (81%), Positives = 98/106 (92%) Frame = -1 Query: 320 ARFRPDLKLIISSATLDAVRFSDYFDNAPIFKVPGRRFPVEIHYTKAPEADYLDAAIVTV 141 +RFRPDLKL+ISSATLDA +FSDYFD+APIFK+PGRR+PVEIHYTKAPEADY+DAAIVTV Sbjct: 581 SRFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEIHYTKAPEADYIDAAIVTV 640 Query: 140 LHIHVTESPGDGDILVFLTGQEEIESAEEILKRRTKSLGTKIAELI 3 L IHVT+ P GDILVFLTGQEEIE+ +EILK RT+ LGTKI+ELI Sbjct: 641 LQIHVTQPP--GDILVFLTGQEEIETVDEILKHRTRGLGTKISELI 684