BLASTX nr result
ID: Cnidium21_contig00038099
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00038099 (461 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002512070.1| RNA binding protein, putative [Ricinus commu... 59 3e-07 ref|XP_002312285.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 >ref|XP_002512070.1| RNA binding protein, putative [Ricinus communis] gi|223549250|gb|EEF50739.1| RNA binding protein, putative [Ricinus communis] Length = 355 Score = 59.3 bits (142), Expect = 3e-07 Identities = 32/63 (50%), Positives = 41/63 (65%), Gaps = 1/63 (1%) Frame = -2 Query: 187 NETKKTSKEMKNLSLD-NKIPRDFLQRFSGVSRQNESNIDIGGDTSDNIELNLGLSLGGR 11 N + +S+ M++LSL+ NK PRD LQRF Q + D ++ IELNLGLSLGGR Sbjct: 9 NRSSSSSRTMESLSLEINKYPRDLLQRFMSNDSQQLKTSEGEEDNTEEIELNLGLSLGGR 68 Query: 10 FGV 2 FGV Sbjct: 69 FGV 71 >ref|XP_002312285.1| predicted protein [Populus trichocarpa] gi|222852105|gb|EEE89652.1| predicted protein [Populus trichocarpa] Length = 211 Score = 57.0 bits (136), Expect = 2e-06 Identities = 30/54 (55%), Positives = 36/54 (66%), Gaps = 1/54 (1%) Frame = -2 Query: 160 MKNLSLD-NKIPRDFLQRFSGVSRQNESNIDIGGDTSDNIELNLGLSLGGRFGV 2 M++LSLD N+ PRD LQRF Q G+ ++ IELNLGLSLGGRFGV Sbjct: 1 MESLSLDINRYPRDLLQRFMSSDAQQYQTATSDGEETEEIELNLGLSLGGRFGV 54