BLASTX nr result

ID: Cnidium21_contig00038086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038086
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001183167.1| hypothetical protein [Zea mays] gi|238009792...    60   3e-07
dbj|BAK01618.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   7e-07
ref|XP_002462559.1| hypothetical protein SORBIDRAFT_02g028170 [S...    59   7e-07
ref|NP_001146204.1| uncharacterized protein LOC100279774 [Zea ma...    58   1e-06
ref|XP_003610523.1| Ubiquitin [Medicago truncatula] gi|355511578...    56   4e-06

>ref|NP_001183167.1| hypothetical protein [Zea mays] gi|238009792|gb|ACR35931.1| unknown
           [Zea mays] gi|414589802|tpg|DAA40373.1| TPA:
           hypothetical protein ZEAMMB73_055204 [Zea mays]
          Length = 880

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
 Frame = -2

Query: 538 LIVDWNTVIETSFDQIGYTDDHLKPLDIRFGT----GTNQTYGRGVRNQWFHRLGCDLVK 371
           +++D + +++ SF+ I       K  ++R G        +  G GV  +WF  L C  + 
Sbjct: 523 MLIDRSHLLDESFNYIAQA----KQTELRGGLFMEFKNEEATGPGVLREWFC-LVCQALF 577

Query: 370 SMGHI--SDTAVEQRAFHLLQSERTKKDE-KYYTFFGKVVGLALLNHALLGVSIGKMLFL 200
           S   +  S    ++R F+L ++        KY+TF G+++GLAL++   +GV I + LFL
Sbjct: 578 SSKQVLFSPCPEDKRRFYLNETSAVDPLHLKYFTFAGRIIGLALMHKVQVGVVIDRTLFL 637

Query: 199 YLGDQHQVITLDDVQDYDPYYHDTLSSLLEMPEEE 95
           +L  +   ITL+D+   DP  + +   +LEM   E
Sbjct: 638 HLAGRS--ITLEDISVADPVKYASCKKILEMDAAE 670


>dbj|BAK01618.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 581

 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
 Frame = -2

Query: 538 LIVDWNTVIETSFDQIGYTDDHLKPLDIRFGT----GTNQTYGRGVRNQWFHRLGCDLVK 371
           +++D + +++ SF+ I       KP ++  G        +  G GV  +WF  +   L  
Sbjct: 224 MLIDRSRLLDESFEYI----TQAKPSELHSGLFMEFKNEEATGPGVLREWFCMVSQALFS 279

Query: 370 SMGHIS-DTAVEQRAFHLLQSERTKKDE-KYYTFFGKVVGLALLNHALLGVSIGKMLFLY 197
               +      +QR F+L  +        KY+ F G+V+GLAL++   +G+ + + LFLY
Sbjct: 280 PQQVLFLPCPNDQRRFYLNGTSVVDPLHLKYFIFSGRVIGLALMHKVQVGIVLDRTLFLY 339

Query: 196 LGDQHQVITLDDVQDYDPYYHDTLSSLLEMPEEEYLDVRRTCVVDV 59
           L  +   ITL+D+   DP+ + +   +LEM   E  D+  T   D+
Sbjct: 340 LAGRS--ITLEDISAADPFTYASCKRILEMGAAEIDDLTLTFSRDI 383


>ref|XP_002462559.1| hypothetical protein SORBIDRAFT_02g028170 [Sorghum bicolor]
           gi|241925936|gb|EER99080.1| hypothetical protein
           SORBIDRAFT_02g028170 [Sorghum bicolor]
          Length = 770

 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
 Frame = -2

Query: 538 LIVDWNTVIETSFDQIGYTDDHLKPLDIRFGT----GTNQTYGRGVRNQWFHRLGCDLVK 371
           +++D + +++ SF+ I       K  ++R G        +  G GV  +WF  L C  + 
Sbjct: 498 MLIDRSHLLDESFNYIAQA----KQTELRGGLFMEFKNEEATGPGVLREWFC-LVCQALF 552

Query: 370 SMGHI--SDTAVEQRAFHLLQSERTKKDE-KYYTFFGKVVGLALLNHALLGVSIGKMLFL 200
           S   +  S    ++R F+L ++        KY+TF G+++GLAL++   +GV + + LFL
Sbjct: 553 SPKQVLFSPCPEDKRRFYLNETSAVDPLHLKYFTFAGRIIGLALMHKVQVGVVLDRTLFL 612

Query: 199 YLGDQHQVITLDDVQDYDPYYHDTLSSLLEMPEEE 95
           +L  +   ITL+D+   DP  + +   +LEM   E
Sbjct: 613 HLAGRS--ITLEDISVADPVKYASCKKILEMDAAE 645


>ref|NP_001146204.1| uncharacterized protein LOC100279774 [Zea mays]
           gi|219886169|gb|ACL53459.1| unknown [Zea mays]
           gi|414886004|tpg|DAA62018.1| TPA: hypothetical protein
           ZEAMMB73_139347 [Zea mays]
          Length = 871

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 41/151 (27%), Positives = 76/151 (50%), Gaps = 3/151 (1%)
 Frame = -2

Query: 538 LIVDWNTVIETSFDQIGYTDDHLKPLDIRFGTGTNQTYGRGVRNQWFHRLGCDLVKSMGH 359
           +++D + +++ SF+ I   +       +       +  G GV  +WF  L C  + S   
Sbjct: 514 MLIDRSHLLDESFNYIAQAEQAELHGALFMEFKNEEATGPGVLREWFC-LVCQALFSPKQ 572

Query: 358 I--SDTAVEQRAFHLLQSERTKKDE-KYYTFFGKVVGLALLNHALLGVSIGKMLFLYLGD 188
           +  S    ++R F+L ++        KY+TF G+++GLAL++   +GV + + LFL+L  
Sbjct: 573 VLFSPCPEDKRRFYLNETSAVDPLHLKYFTFAGRIIGLALMHKVQVGVVLDRTLFLHLAG 632

Query: 187 QHQVITLDDVQDYDPYYHDTLSSLLEMPEEE 95
           +   ITL+D+   DP  + +   +LEM   E
Sbjct: 633 RS--ITLEDISVADPVKYASCKKILEMDAAE 661


>ref|XP_003610523.1| Ubiquitin [Medicago truncatula] gi|355511578|gb|AES92720.1|
           Ubiquitin [Medicago truncatula]
          Length = 907

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 37/155 (23%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
 Frame = -2

Query: 538 LIVDWNTVIETSFDQIGYTDDHLKPLDIRFGTGTNQTYGRGVRNQWFHRLGCDLVKSMGH 359
           +++D + ++  SF+ I   D       +       +  G GV  +WF  L C  + +  H
Sbjct: 521 MLIDRSQLLTESFEYIARADPESLRAGLFMEFKNEEATGPGVLREWF-LLVCQALFNQEH 579

Query: 358 ISDTAVEQRAFHLLQSERTKKDE----KYYTFFGKVVGLALLNHALLGVSIGKMLFLYLG 191
               A  +     L +  +K       +Y++F G+V+ LAL++   +G+   ++ FL L 
Sbjct: 580 ALFVACPKDRTRFLPNSASKVQHNLHLEYFSFCGRVIALALMHKVQVGIVFDRVFFLQLA 639

Query: 190 DQHQVITLDDVQDYDPYYHDTLSSLLEMPEEEYLD 86
              + ITL+D++D DP  + +   +L+M + +++D
Sbjct: 640 G--KPITLEDIRDADPDLYRSCKQILDM-DSDFID 671


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