BLASTX nr result

ID: Cnidium21_contig00038044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038044
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF69810.1| pol protein [Picea abies]                               91   1e-16
ref|XP_002489250.1| hypothetical protein SORBIDRAFT_0012s014620 ...    86   3e-15
gb|ACB28472.1| polyprotein [Ananas comosus]                            86   3e-15
gb|AAF69806.1| pol protein [Picea abies]                               86   3e-15
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]    86   4e-15

>gb|AAF69810.1| pol protein [Picea abies]
          Length = 148

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 39/69 (56%), Positives = 56/69 (81%)
 Frame = +3

Query: 3   WSSYLMDKHFYIKTDHWALKFLTEQKVSNLLQQKWISKLLGYNFTILYRKGKYNIVADAL 182
           W  YL+ +HF +KTDH +LK+  EQ++S+  QQKW++K+LGY+F I+Y+KGK N+VADAL
Sbjct: 1   WRPYLIGRHFKVKTDHDSLKYFLEQRLSSEEQQKWVTKILGYDFEIVYKKGKQNVVADAL 60

Query: 183 SRKFEDSDS 209
           SRK ED ++
Sbjct: 61  SRKDEDVEA 69


>ref|XP_002489250.1| hypothetical protein SORBIDRAFT_0012s014620 [Sorghum bicolor]
            gi|241947110|gb|EES20255.1| hypothetical protein
            SORBIDRAFT_0012s014620 [Sorghum bicolor]
          Length = 1445

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/85 (49%), Positives = 59/85 (69%), Gaps = 3/85 (3%)
 Frame = +3

Query: 3    WSSYLMDKHFYIKTDHWALKFLTEQKVSNLLQQKWISKLLGYNFTILYRKGKYNIVADAL 182
            W  YL  +HF I+TDH++LKFL +Q++S + Q +WISKL G++FT+ YR G+ N VADAL
Sbjct: 1345 WRPYLWGRHFLIRTDHYSLKFLLDQRLSTVPQHQWISKLFGFDFTVEYRPGRLNTVADAL 1404

Query: 183  SRKFEDSDSQQPLQ---ARC*LPSP 248
            SR+  D++ + P Q   A C L  P
Sbjct: 1405 SRR--DTEQEAPSQDGAAVCALSGP 1427


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 36/62 (58%), Positives = 51/62 (82%)
 Frame = +3

Query: 3   WSSYLMDKHFYIKTDHWALKFLTEQKVSNLLQQKWISKLLGYNFTILYRKGKYNIVADAL 182
           W  YL+ +HF IKTDH +LK+L EQ+VS   QQKW++KL+GY++ ++Y+KG+ N+VADAL
Sbjct: 577 WRPYLIGRHFKIKTDHQSLKYLMEQRVSTPSQQKWVAKLMGYDYELIYKKGQENVVADAL 636

Query: 183 SR 188
           SR
Sbjct: 637 SR 638


>gb|AAF69806.1| pol protein [Picea abies]
          Length = 83

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 37/66 (56%), Positives = 53/66 (80%)
 Frame = +3

Query: 3   WSSYLMDKHFYIKTDHWALKFLTEQKVSNLLQQKWISKLLGYNFTILYRKGKYNIVADAL 182
           W  YL+ +HF +K DH +LK+  EQ++S+  QQKW++K+LGY+F I+Y+KG+ N+VADAL
Sbjct: 1   WRPYLIGRHFKVKIDHDSLKYFLEQRLSSEEQQKWVTKILGYDFEIVYKKGEPNVVADAL 60

Query: 183 SRKFED 200
           SRK ED
Sbjct: 61  SRKDED 66


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/66 (60%), Positives = 50/66 (75%)
 Frame = +3

Query: 3    WSSYLMDKHFYIKTDHWALKFLTEQKVSNLLQQKWISKLLGYNFTILYRKGKYNIVADAL 182
            W SYL+  +F I+TD  +LK+L EQK+   LQQKWI+KLLGY F + Y++GK N VADAL
Sbjct: 912  WRSYLLGHNFKIQTDQXSLKYLLEQKMGTPLQQKWITKLLGYEFVVEYKQGKENKVADAL 971

Query: 183  SRKFED 200
            SRK ED
Sbjct: 972  SRKMED 977


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