BLASTX nr result

ID: Cnidium21_contig00038035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038035
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308911.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
emb|CBI30568.3| unnamed protein product [Vitis vinifera]              123   1e-26
ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex s...   123   1e-26
ref|XP_002523428.1| centromere/microtubule binding protein cbf5,...   122   3e-26
ref|XP_002540014.1| centromere/microtubule binding protein cbf5,...   122   3e-26

>ref|XP_002308911.1| predicted protein [Populus trichocarpa] gi|222854887|gb|EEE92434.1|
           predicted protein [Populus trichocarpa]
          Length = 593

 Score =  126 bits (316), Expect = 2e-27
 Identities = 65/94 (69%), Positives = 73/94 (77%), Gaps = 6/94 (6%)
 Frame = -1

Query: 265 MSELDLSHSXXXXXXXKPQDNNSEK---TSTD---LIKPQSFTPPIDTSQWPILLKNYDR 104
           MSE++LS S       K Q+  ++    T TD   +IKPQ+FTP IDTSQWPILLKNYDR
Sbjct: 1   MSEVELSRSEKKKHKKKTQETQTDANPTTDTDKDFMIKPQNFTPTIDTSQWPILLKNYDR 60

Query: 103 LNVRTGHYTPLPSGFSPLKRPLAEYIRYGVMNLD 2
           LNVRTGHYTPLPSG SPLKRPLAEYIRYG+MNLD
Sbjct: 61  LNVRTGHYTPLPSGHSPLKRPLAEYIRYGIMNLD 94


>emb|CBI30568.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score =  123 bits (309), Expect = 1e-26
 Identities = 65/98 (66%), Positives = 72/98 (73%), Gaps = 10/98 (10%)
 Frame = -1

Query: 265 MSELDLSHSXXXXXXXKPQDN-------NSEKTSTD---LIKPQSFTPPIDTSQWPILLK 116
           MSEL+LS S       K +          S+ T  D   LIKPQSFTP +DTSQWPILLK
Sbjct: 1   MSELELSRSEKKKKKNKSRTEALDVVEFGSDPTQKDGEFLIKPQSFTPSLDTSQWPILLK 60

Query: 115 NYDRLNVRTGHYTPLPSGFSPLKRPLAEYIRYGVMNLD 2
           NYDRLNVRTGHYTPLPSG+SPLKRPLAEYIRYG++NLD
Sbjct: 61  NYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGILNLD 98


>ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Vitis
           vinifera]
          Length = 586

 Score =  123 bits (309), Expect = 1e-26
 Identities = 65/98 (66%), Positives = 72/98 (73%), Gaps = 10/98 (10%)
 Frame = -1

Query: 265 MSELDLSHSXXXXXXXKPQDN-------NSEKTSTD---LIKPQSFTPPIDTSQWPILLK 116
           MSEL+LS S       K +          S+ T  D   LIKPQSFTP +DTSQWPILLK
Sbjct: 1   MSELELSRSEKKKKKNKSRTEALDVVEFGSDPTQKDGEFLIKPQSFTPSLDTSQWPILLK 60

Query: 115 NYDRLNVRTGHYTPLPSGFSPLKRPLAEYIRYGVMNLD 2
           NYDRLNVRTGHYTPLPSG+SPLKRPLAEYIRYG++NLD
Sbjct: 61  NYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGILNLD 98


>ref|XP_002523428.1| centromere/microtubule binding protein cbf5, putative [Ricinus
           communis] gi|223537378|gb|EEF39007.1|
           centromere/microtubule binding protein cbf5, putative
           [Ricinus communis]
          Length = 432

 Score =  122 bits (306), Expect = 3e-26
 Identities = 56/70 (80%), Positives = 61/70 (87%)
 Frame = -1

Query: 211 QDNNSEKTSTDLIKPQSFTPPIDTSQWPILLKNYDRLNVRTGHYTPLPSGFSPLKRPLAE 32
           Q+   ++    +IKPQSFTPP DTS+WPILLKNYDRLNVRTGHYTPLPSG SPLKRPLAE
Sbjct: 6   QNGTDQEQDLTMIKPQSFTPPNDTSKWPILLKNYDRLNVRTGHYTPLPSGHSPLKRPLAE 65

Query: 31  YIRYGVMNLD 2
           YIRYGVMNLD
Sbjct: 66  YIRYGVMNLD 75


>ref|XP_002540014.1| centromere/microtubule binding protein cbf5, putative [Ricinus
           communis] gi|223500118|gb|EEF22369.1|
           centromere/microtubule binding protein cbf5, putative
           [Ricinus communis]
          Length = 264

 Score =  122 bits (306), Expect = 3e-26
 Identities = 56/70 (80%), Positives = 61/70 (87%)
 Frame = -1

Query: 211 QDNNSEKTSTDLIKPQSFTPPIDTSQWPILLKNYDRLNVRTGHYTPLPSGFSPLKRPLAE 32
           Q+   ++    +IKPQSFTPP DTS+WPILLKNYDRLNVRTGHYTPLPSG SPLKRPLAE
Sbjct: 6   QNGTDQEQDLTMIKPQSFTPPNDTSKWPILLKNYDRLNVRTGHYTPLPSGHSPLKRPLAE 65

Query: 31  YIRYGVMNLD 2
           YIRYGVMNLD
Sbjct: 66  YIRYGVMNLD 75


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