BLASTX nr result

ID: Cnidium21_contig00038030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038030
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30649.3| unnamed protein product [Vitis vinifera]              174   9e-42
ref|XP_002272216.1| PREDICTED: glutamate receptor 2.7-like [Viti...   174   9e-42
emb|CAN63664.1| hypothetical protein VITISV_034689 [Vitis vinifera]   172   2e-41
ref|XP_002316843.1| glutamate-gated kainate-type ion channel rec...   164   5e-39
ref|XP_002316842.1| glutamate-gated kainate-type ion channel rec...   161   6e-38

>emb|CBI30649.3| unnamed protein product [Vitis vinifera]
          Length = 924

 Score =  174 bits (440), Expect = 9e-42
 Identities = 86/151 (56%), Positives = 117/151 (77%), Gaps = 1/151 (0%)
 Frame = +3

Query: 15  SSGNPFQAATTADQLIKAEKVQVLIVSQTWQEAAIIADVGNRAQVPVVSLASSDISPTLT 194
           S+G P QAA TA +LIK ++V V++ + TWQEAA++ADVGNRAQVPV+SLA+S I+P L 
Sbjct: 84  STGEPIQAAFTAQELIKEKEVGVIVGTDTWQEAALVADVGNRAQVPVLSLAASTITPPLR 143

Query: 195 HVRWPFLIQLASNSSKEMESVAAIVHSYDWKKVVVIYEDDAY-GDPGTLAVLSQALNDKG 371
            +RWPFL Q+ SN S+++  ++AIV SY W++V+V+YEDDA+ GD G LA LS+AL    
Sbjct: 144 QIRWPFLTQMGSNVSEQIRCISAIVGSYHWQRVIVVYEDDAHGGDSGMLAPLSEALQYFS 203

Query: 372 SEIEYNLALPPYYSLSDPRGFIGDEVVKLLS 464
           +EIEY + LPP  SLSDP+  I +E++KLLS
Sbjct: 204 TEIEYTVVLPPISSLSDPKEAINEELMKLLS 234


>ref|XP_002272216.1| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 916

 Score =  174 bits (440), Expect = 9e-42
 Identities = 86/151 (56%), Positives = 117/151 (77%), Gaps = 1/151 (0%)
 Frame = +3

Query: 15  SSGNPFQAATTADQLIKAEKVQVLIVSQTWQEAAIIADVGNRAQVPVVSLASSDISPTLT 194
           S+G P QAA TA +LIK ++V V++ + TWQEAA++ADVGNRAQVPV+SLA+S I+P L 
Sbjct: 84  STGEPIQAAFTAQELIKEKEVGVIVGTDTWQEAALVADVGNRAQVPVLSLAASTITPPLR 143

Query: 195 HVRWPFLIQLASNSSKEMESVAAIVHSYDWKKVVVIYEDDAY-GDPGTLAVLSQALNDKG 371
            +RWPFL Q+ SN S+++  ++AIV SY W++V+V+YEDDA+ GD G LA LS+AL    
Sbjct: 144 QIRWPFLTQMGSNVSEQIRCISAIVGSYHWQRVIVVYEDDAHGGDSGMLAPLSEALQYFS 203

Query: 372 SEIEYNLALPPYYSLSDPRGFIGDEVVKLLS 464
           +EIEY + LPP  SLSDP+  I +E++KLLS
Sbjct: 204 TEIEYTVVLPPISSLSDPKEAINEELMKLLS 234


>emb|CAN63664.1| hypothetical protein VITISV_034689 [Vitis vinifera]
          Length = 916

 Score =  172 bits (437), Expect = 2e-41
 Identities = 86/151 (56%), Positives = 116/151 (76%), Gaps = 1/151 (0%)
 Frame = +3

Query: 15  SSGNPFQAATTADQLIKAEKVQVLIVSQTWQEAAIIADVGNRAQVPVVSLASSDISPTLT 194
           S+G P QAA TA +LIK ++V V++ + TWQEAA++ADVGNRAQVPV+SLA+S I+P L 
Sbjct: 84  STGEPIQAAFTAQELIKEKEVGVIVGTDTWQEAALVADVGNRAQVPVLSLAASTITPPLR 143

Query: 195 HVRWPFLIQLASNSSKEMESVAAIVHSYDWKKVVVIYEDDAY-GDPGTLAVLSQALNDKG 371
            +RWPFL  + SN S+++  ++AIV SY W++V+V+YEDDA+ GD G LA LS+AL    
Sbjct: 144 QIRWPFLXXMGSNVSEQIRCISAIVGSYHWQRVIVVYEDDAHGGDSGMLAPLSEALQYFS 203

Query: 372 SEIEYNLALPPYYSLSDPRGFIGDEVVKLLS 464
           SEIEY + LPP  SLSDP+  I +E++KLLS
Sbjct: 204 SEIEYTVVLPPISSLSDPKEAINEELMKLLS 234


>ref|XP_002316843.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222859908|gb|EEE97455.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 867

 Score =  164 bits (416), Expect = 5e-39
 Identities = 77/147 (52%), Positives = 115/147 (78%), Gaps = 1/147 (0%)
 Frame = +3

Query: 21  GNPFQAATTADQLIKAEKVQVLIVSQTWQEAAIIADVGNRAQVPVVSLASSDISPTLTHV 200
           G+P QAA  A++LIK +KV+V+I    W+EAA++A++GN++QVP++S A+   +P LT +
Sbjct: 26  GDPLQAAYAAEELIKEKKVKVIIGMDKWEEAALVANIGNQSQVPILSFAAPARTPILTSL 85

Query: 201 RWPFLIQLASNSSKEMESVAAIVHSYDWKKVVVIYEDDAYG-DPGTLAVLSQALNDKGSE 377
           RWPFLI++AS+ S++M  +AA+VHSY+WK+VVVIYED+  G + G LA+L++AL + GSE
Sbjct: 86  RWPFLIRMASDGSEQMRCIAALVHSYNWKRVVVIYEDEVLGSEYGNLALLTEALQEVGSE 145

Query: 378 IEYNLALPPYYSLSDPRGFIGDEVVKL 458
           IEY L LPP+  L+DP   + DE++KL
Sbjct: 146 IEYRLVLPPFSFLTDPIDVVQDELIKL 172


>ref|XP_002316842.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222859907|gb|EEE97454.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 836

 Score =  161 bits (407), Expect = 6e-38
 Identities = 75/147 (51%), Positives = 112/147 (76%), Gaps = 1/147 (0%)
 Frame = +3

Query: 21  GNPFQAATTADQLIKAEKVQVLIVSQTWQEAAIIADVGNRAQVPVVSLASSDISPTLTHV 200
           G+P QAA  A++LIK +KV+V+I    W+EAA++A++GN++QVP++S A+   +P  T +
Sbjct: 26  GDPLQAAYAAEELIKEKKVEVIIGMDKWEEAALVANIGNQSQVPILSFAAPARTPISTSL 85

Query: 201 RWPFLIQLASNSSKEMESVAAIVHSYDWKKVVVIYEDDAYG-DPGTLAVLSQALNDKGSE 377
           RWPFLI++AS+ S++M  +AA+VHSY+WK+ VVIYEDD  G + G  A+L++AL + GSE
Sbjct: 86  RWPFLIRMASDGSEQMSCIAALVHSYNWKRAVVIYEDDVLGSESGNFALLTEALQEVGSE 145

Query: 378 IEYNLALPPYYSLSDPRGFIGDEVVKL 458
           IEY L LPP+  L+DP   + DE++KL
Sbjct: 146 IEYRLVLPPFSFLTDPIDVVQDELMKL 172


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