BLASTX nr result

ID: Cnidium21_contig00038019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038019
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21840.3| unnamed protein product [Vitis vinifera]              144   1e-32
ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi...   144   1e-32
emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]   144   1e-32
ref|XP_002330626.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_002322750.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28

>emb|CBI21840.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  144 bits (362), Expect = 1e-32
 Identities = 67/110 (60%), Positives = 89/110 (80%)
 Frame = +2

Query: 2   ISQWMSDKSFLDLTSADVAIQLDLIAKVHGVEEAEEFFNNVPISLKDFRTYGALLVCYAD 181
           I +W+ DK + D++  DVAIQLDLI+KVHG+E+AE++FN  P SL+ F+ YGALL CY+ 
Sbjct: 89  IYEWIRDKFYFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQ 148

Query: 182 AKLLEKAEAVMQSMRELSYMQTLSYNVMLKLYSHCGKLDKLDSLMQEMED 331
            K LEKAEA+MQ MR++ +++TLSYNVML LYS  GK +KLD+LMQEME+
Sbjct: 149 KKSLEKAEAIMQEMRDMGFVKTLSYNVMLGLYSRLGKHEKLDNLMQEMEE 198


>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial [Vitis vinifera]
          Length = 499

 Score =  144 bits (362), Expect = 1e-32
 Identities = 67/110 (60%), Positives = 89/110 (80%)
 Frame = +2

Query: 2   ISQWMSDKSFLDLTSADVAIQLDLIAKVHGVEEAEEFFNNVPISLKDFRTYGALLVCYAD 181
           I +W+ DK + D++  DVAIQLDLI+KVHG+E+AE++FN  P SL+ F+ YGALL CY+ 
Sbjct: 89  IYEWIRDKFYFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQ 148

Query: 182 AKLLEKAEAVMQSMRELSYMQTLSYNVMLKLYSHCGKLDKLDSLMQEMED 331
            K LEKAEA+MQ MR++ +++TLSYNVML LYS  GK +KLD+LMQEME+
Sbjct: 149 KKSLEKAEAIMQEMRDMGFVKTLSYNVMLGLYSRLGKHEKLDNLMQEMEE 198


>emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
          Length = 499

 Score =  144 bits (362), Expect = 1e-32
 Identities = 67/110 (60%), Positives = 89/110 (80%)
 Frame = +2

Query: 2   ISQWMSDKSFLDLTSADVAIQLDLIAKVHGVEEAEEFFNNVPISLKDFRTYGALLVCYAD 181
           I +W+ DK + D++  DVAIQLDLI+KVHG+E+AE++FN  P SL+ F+ YGALL CY+ 
Sbjct: 89  IYEWIRDKFYFDISPGDVAIQLDLISKVHGLEQAEKYFNETPNSLRSFQVYGALLNCYSQ 148

Query: 182 AKLLEKAEAVMQSMRELSYMQTLSYNVMLKLYSHCGKLDKLDSLMQEMED 331
            K LEKAEA+MQ MR++ +++TLSYNVML LYS  GK +KLD+LMQEME+
Sbjct: 149 KKSLEKAEAIMQEMRDMGFVKTLSYNVMLGLYSRLGKHEKLDNLMQEMEE 198


>ref|XP_002330626.1| predicted protein [Populus trichocarpa] gi|222872230|gb|EEF09361.1|
           predicted protein [Populus trichocarpa]
          Length = 441

 Score =  135 bits (340), Expect = 3e-30
 Identities = 64/110 (58%), Positives = 87/110 (79%)
 Frame = +2

Query: 2   ISQWMSDKSFLDLTSADVAIQLDLIAKVHGVEEAEEFFNNVPISLKDFRTYGALLVCYAD 181
           ISQWMSD+   + +  D A++LDLI+KVHG+E+AEE++N++P  L+  + YGALL CYA 
Sbjct: 58  ISQWMSDERGSEQSPGDFAVRLDLISKVHGLEQAEEYYNSIPDHLRGTQVYGALLNCYAH 117

Query: 182 AKLLEKAEAVMQSMRELSYMQTLSYNVMLKLYSHCGKLDKLDSLMQEMED 331
            + LEKAEA MQ MREL  +QTLSYNVML LYSH G+ +KL++L++EME+
Sbjct: 118 KRRLEKAEATMQKMRELGLVQTLSYNVMLSLYSHMGRYEKLEALVKEMEE 167


>ref|XP_002322750.1| predicted protein [Populus trichocarpa] gi|222867380|gb|EEF04511.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score =  129 bits (325), Expect = 2e-28
 Identities = 66/116 (56%), Positives = 83/116 (71%), Gaps = 1/116 (0%)
 Frame = +2

Query: 2   ISQWMSDKSFLDLTSADVAIQLDLIAKVHGVEEAEEFFNNVPISLKDFRTYGALLVCYAD 181
           IS WM+DK +L LTS  VA++LDLI+KVHG+E+ E +FNN+P  LK   +YGALL CYA 
Sbjct: 100 ISMWMTDKRYLALTSRAVAVRLDLISKVHGIEQVENYFNNIPTKLKGLESYGALLNCYAY 159

Query: 182 AKLLEKAEAVMQSMRELSY-MQTLSYNVMLKLYSHCGKLDKLDSLMQEMEDVDIKF 346
            K +EKAEAVMQ MREL +  + L + VML LY   G  +KLD LM+EME+  I F
Sbjct: 160 VKSVEKAEAVMQRMRELGFARKPLVFTVMLNLYYKTGNTEKLDPLMREMEENGISF 215


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