BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00038018
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531596.1| pentatricopeptide repeat-containing protein,...   148   6e-34
ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containi...   139   5e-31
ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containi...   139   5e-31
ref|XP_002322750.1| predicted protein [Populus trichocarpa] gi|2...   125   6e-27
ref|XP_002517926.1| pentatricopeptide repeat-containing protein,...   125   8e-27

>ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528792|gb|EEF30799.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 300

 Score =  148 bits (374), Expect = 6e-34
 Identities = 71/123 (57%), Positives = 95/123 (77%)
 Frame = +1

Query: 235 GINDDDSLYRRISPLGDWSVSMVPILNQWIQEGRIVNKPALQVIIKQLRRYKRYKHALEV 414
           G ++ + LYRRISP+GD  VS+VPIL+QWI+EG+ VNK  LQV IK+LR  KRY HALE+
Sbjct: 44  GKDNLNQLYRRISPVGDPKVSIVPILDQWIEEGKSVNKDQLQVFIKELRYCKRYTHALEI 103

Query: 415 SQWMSDKRFFHLSRSDMAVRLDLISRAKGIDQALIYFNDIPEQMKCMEVYGSLHNCYVEE 594
           S WMSDKR+F L+  D+A+RLDL+S+  GI+QA  YF ++P+++K +EVY +L NCY   
Sbjct: 104 SMWMSDKRYFALTSRDVAIRLDLMSKVLGIEQAEKYFENVPQKLKVLEVYNALLNCYAYA 163

Query: 595 NSV 603
            SV
Sbjct: 164 KSV 166


>ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 461

 Score =  139 bits (349), Expect = 5e-31
 Identities = 63/118 (53%), Positives = 93/118 (78%)
 Frame = +1

Query: 250 DSLYRRISPLGDWSVSMVPILNQWIQEGRIVNKPALQVIIKQLRRYKRYKHALEVSQWMS 429
           D+LYRRISP+GD ++S+ P+L+QW+ EGR+V +  L+ IIK+LR YKR+KHALE+S+WMS
Sbjct: 29  DNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWMS 88

Query: 430 DKRFFHLSRSDMAVRLDLISRAKGIDQALIYFNDIPEQMKCMEVYGSLHNCYVEENSV 603
           DKR+F LS +D+A+R++LI R  G++Q   YF+++P Q+K  +V+ +L NCY  E  V
Sbjct: 89  DKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCV 146


>ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 227

 Score =  139 bits (349), Expect = 5e-31
 Identities = 63/118 (53%), Positives = 93/118 (78%)
 Frame = +1

Query: 250 DSLYRRISPLGDWSVSMVPILNQWIQEGRIVNKPALQVIIKQLRRYKRYKHALEVSQWMS 429
           D+LYRRISP+GD ++S+ P+L+QW+ EGR+V +  L+ IIK+LR YKR+KHALE+S+WMS
Sbjct: 29  DNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWMS 88

Query: 430 DKRFFHLSRSDMAVRLDLISRAKGIDQALIYFNDIPEQMKCMEVYGSLHNCYVEENSV 603
           DKR+F LS +D+A+R++LI R  G++Q   YF+++P Q+K  +V+ +L NCY  E  V
Sbjct: 89  DKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCV 146


>ref|XP_002322750.1| predicted protein [Populus trichocarpa] gi|222867380|gb|EEF04511.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score =  125 bits (314), Expect = 6e-27
 Identities = 58/116 (50%), Positives = 85/116 (73%)
 Frame = +1

Query: 256 LYRRISPLGDWSVSMVPILNQWIQEGRIVNKPALQVIIKQLRRYKRYKHALEVSQWMSDK 435
           L RR+S + D +VS++P+L++WIQEG  + +  +  +IK+LR+Y+RY HALE+S WM+DK
Sbjct: 48  LSRRLSRIRDHNVSVIPVLDKWIQEGETIWEDLIHALIKELRQYRRYHHALEISMWMTDK 107

Query: 436 RFFHLSRSDMAVRLDLISRAKGIDQALIYFNDIPEQMKCMEVYGSLHNCYVEENSV 603
           R+  L+   +AVRLDLIS+  GI+Q   YFN+IP ++K +E YG+L NCY    SV
Sbjct: 108 RYLALTSRAVAVRLDLISKVHGIEQVENYFNNIPTKLKGLESYGALLNCYAYVKSV 163


>ref|XP_002517926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542908|gb|EEF44444.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  125 bits (313), Expect = 8e-27
 Identities = 62/122 (50%), Positives = 86/122 (70%)
 Frame = +1

Query: 217 STASVTGINDDDSLYRRISPLGDWSVSMVPILNQWIQEGRIVNKPALQVIIKQLRRYKRY 396
           ST S++     D+LY RIS  G  S+S+VPIL +W++EG  V KP LQ  +KQLR+Y+R+
Sbjct: 28  STYSLSSSAPIDTLYGRISKAGKPSISIVPILEKWLEEGNDVKKPELQKFVKQLRKYRRF 87

Query: 397 KHALEVSQWMSDKRFFHLSRSDMAVRLDLISRAKGIDQALIYFNDIPEQMKCMEVYGSLH 576
            HAL+VS+WM+DK+   L   D+AVRLDLIS+  G+ +A  YFN IP+  +  +VYG+L 
Sbjct: 88  THALQVSEWMTDKKGCSLLPGDVAVRLDLISKVHGLVKAEEYFNSIPDTSRDRQVYGALL 147

Query: 577 NC 582
           NC
Sbjct: 148 NC 149